RNA–Protein interactions for RNA: ENST00000618417.1

MKL1-212, Transcript of MKL/myocardin-like protein 1, humanhuman

TSL 5 BASIC

Gene MKL1, Length 1,842 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKL1-212ENST00000618417 NISCHQ9Y2I1 1504 aa31.01■■■□□ 2.55
MKL1-212ENST00000618417 CCDC180Q9P1Z9 1646 aa27.29■■□□□ 1.96
MKL1-212ENST00000618417 ZCCHC6Q5VYS8 1495 aaKnown RBP26.06■■□□□ 1.76
MKL1-212ENST00000618417 CHIC1Q5VXU3 224 aa25.9■■□□□ 1.74
MKL1-212ENST00000618417 AEBP2Q6ZN18 517 aaPredicted RBP25.86■■□□□ 1.73
MKL1-212ENST00000618417 DCAF1Q9Y4B6 1507 aa25.77■■□□□ 1.72
MKL1-212ENST00000618417 ABCC9O60706 1549 aa25.6■■□□□ 1.69
MKL1-212ENST00000618417 MYO15BQ96JP2 1530 aa25.53■■□□□ 1.68
MKL1-212ENST00000618417 DCAF8L2P0C7V8 631 aa25.38■■□□□ 1.65
MKL1-212ENST00000618417 NACADO15069 1562 aa25.35■■□□□ 1.65
MKL1-212ENST00000618417 RB1CC1Q8TDY2 1594 aa25.16■■□□□ 1.62
MKL1-212ENST00000618417 SHROOM4Q9ULL8 1493 aa24.99■■□□□ 1.59
MKL1-212ENST00000618417 SCRIBQ14160 1630 aa24.88■■□□□ 1.57
MKL1-212ENST00000618417 UNC13AQ9UPW8 1703 aa24.63■■□□□ 1.53
MKL1-212ENST00000618417 BICRAQ9NZM4 1560 aa24.28■■□□□ 1.48
MKL1-212ENST00000618417 BAZ1AQ9NRL2 1556 aaPredicted RBP24.03■■□□□ 1.44
MKL1-212ENST00000618417 SUPT5HO00267 1087 aaKnown RBP23.99■■□□□ 1.43
MKL1-212ENST00000618417 PABPN1Q86U42 306 aaKnown RBP eCLIP23.98■■□□□ 1.43
MKL1-212ENST00000618417 CECR2Q9BXF3 1484 aa23.96■■□□□ 1.43
MKL1-212ENST00000618417 RSF1Q96T23 1441 aaPredicted RBP23.93■■□□□ 1.42
MKL1-212ENST00000618417 SMARCA4P51532 1647 aa23.91■■□□□ 1.42
MKL1-212ENST00000618417 MROH2BQ7Z745 1585 aa23.88■■□□□ 1.41
MKL1-212ENST00000618417 WIZO95785 1651 aa23.71■■□□□ 1.39
MKL1-212ENST00000618417 PEG3Q9GZU2 1588 aa23.67■■□□□ 1.38
MKL1-212ENST00000618417 EIF4G1Q04637 1599 aaKnown RBP23.61■■□□□ 1.37
MKL1-212ENST00000618417 SMARCA2P51531 1590 aa23.57■■□□□ 1.36
MKL1-212ENST00000618417 TOP2AP11388 1531 aaKnown RBP23.56■■□□□ 1.36
MKL1-212ENST00000618417 ATAD2BQ9ULI0 1458 aa23.46■■□□□ 1.35
MKL1-212ENST00000618417 BAZ1BQ9UIG0 1483 aaKnown RBP23.38■■□□□ 1.33
MKL1-212ENST00000618417 HMGXB3Q12766 1538 aa23.38■■□□□ 1.33
MKL1-212ENST00000618417 NCAPD3P42695 1498 aa23.3■■□□□ 1.32
MKL1-212ENST00000618417 CC2D2AQ9P2K1 1620 aa23.26■■□□□ 1.31
MKL1-212ENST00000618417 CCDC88BA6NC98 1476 aa23.18■■□□□ 1.3
MKL1-212ENST00000618417 PHF23Q9BUL5 403 aaPredicted RBP22.91■■□□□ 1.26
MKL1-212ENST00000618417 PRDM2Q13029 1718 aa22.87■■□□□ 1.25
MKL1-212ENST00000618417 CFTRP13569 1480 aa22.76■■□□□ 1.23
MKL1-212ENST00000618417 CADPSQ9ULU8 1353 aa22.67■■□□□ 1.22
MKL1-212ENST00000618417 TRIM41Q8WV44 630 aa22.66■■□□□ 1.22
MKL1-212ENST00000618417 ABCC8Q09428 1581 aa22.66■■□□□ 1.22
MKL1-212ENST00000618417 LAMC3Q9Y6N6 1575 aa22.63■■□□□ 1.21
MKL1-212ENST00000618417 WRNQ14191 1432 aaPredicted RBP eCLIP22.6■■□□□ 1.21
MKL1-212ENST00000618417 BIVM-ERCC5R4GMW8 1640 aa22.51■■□□□ 1.19
MKL1-212ENST00000618417 SYNJ1O43426 1573 aa22.49■■□□□ 1.19
MKL1-212ENST00000618417 TOP2BQ02880 1626 aa22.49■■□□□ 1.19
MKL1-212ENST00000618417 DNAJC5BQ9UF47 199 aa22.44■■□□□ 1.18
MKL1-212ENST00000618417 FANCD2Q9BXW9 1451 aa22.43■■□□□ 1.18
MKL1-212ENST00000618417 NESP48681 1621 aa22.4■■□□□ 1.18
MKL1-212ENST00000618417 PDS5BQ9NTI5 1447 aa22.39■■□□□ 1.17
MKL1-212ENST00000618417 CUX1P39880 1505 aa22.37■■□□□ 1.17
MKL1-212ENST00000618417 CEP164Q9UPV0 1460 aa22.36■■□□□ 1.17
MKL1-212ENST00000618417 EEA1Q15075 1411 aa22.34■■□□□ 1.17
MKL1-212ENST00000618417 DNMBPQ6XZF7 1577 aa22.31■■□□□ 1.16
MKL1-212ENST00000618417 KIF21AQ7Z4S6 1674 aa22.3■■□□□ 1.16
MKL1-212ENST00000618417 TOPBP1Q92547 1522 aa22.19■■□□□ 1.14
MKL1-212ENST00000618417 SOGA1O94964 1423 aa22.15■■□□□ 1.14
MKL1-212ENST00000618417 FGD5Q6ZNL6 1462 aa22.15■■□□□ 1.14
MKL1-212ENST00000618417 URB2Q14146 1524 aaKnown RBP22.13■■□□□ 1.13
MKL1-212ENST00000618417 MRC2Q9UBG0 1479 aa22.11■■□□□ 1.13
MKL1-212ENST00000618417 FAM9AQ8IZU1 332 aaPredicted RBP22.1■■□□□ 1.13
MKL1-212ENST00000618417 POLA1P09884 1462 aaPredicted RBP22.06■■□□□ 1.12
MKL1-212ENST00000618417 KIF27Q86VH2 1401 aa22.06■■□□□ 1.12
MKL1-212ENST00000618417 ERCC6Q03468 1493 aa22.05■■□□□ 1.12
MKL1-212ENST00000618417 KIF21BO75037 1637 aa22.04■■□□□ 1.12
MKL1-212ENST00000618417 RUSC2Q8N2Y8 1516 aa22.04■■□□□ 1.12
MKL1-212ENST00000618417 WDR62O43379 1518 aa22.02■■□□□ 1.12
MKL1-212ENST00000618417 WDR97A6NE52 1622 aa22.02■■□□□ 1.12
MKL1-212ENST00000618417 CSRNP3Q8WYN3 585 aa22.01■■□□□ 1.11
MKL1-212ENST00000618417 ABCA10Q8WWZ4 1543 aa22.01■■□□□ 1.11
MKL1-212ENST00000618417 THOC2Q8NI27 1593 aaKnown RBP21.98■■□□□ 1.11
MKL1-212ENST00000618417 CUX2O14529 1486 aa21.98■■□□□ 1.11
MKL1-212ENST00000618417 GOLGA3Q08378 1498 aa21.96■■□□□ 1.11
MKL1-212ENST00000618417 LOC105371045A0A1W2PR82 267 aa21.94■■□□□ 1.1
MKL1-212ENST00000618417 ERICH3Q5RHP9 1530 aa21.92■■□□□ 1.1
MKL1-212ENST00000618417 TARBP1Q13395 1621 aaKnown RBP21.9■■□□□ 1.1
MKL1-212ENST00000618417 RAD54L2Q9Y4B4 1467 aa21.89■■□□□ 1.1
MKL1-212ENST00000618417 ABCA5Q8WWZ7 1642 aa21.87■■□□□ 1.09
MKL1-212ENST00000618417 PRXQ9BXM0 1461 aa21.85■■□□□ 1.09
MKL1-212ENST00000618417 CUL7Q14999 1698 aa21.85■■□□□ 1.09
MKL1-212ENST00000618417 IFT140Q96RY7 1462 aa21.84■■□□□ 1.09
MKL1-212ENST00000618417 TNIKQ9UKE5 1360 aa21.81■■□□□ 1.08
MKL1-212ENST00000618417 RAPGEF2Q9Y4G8 1499 aa21.76■■□□□ 1.07
MKL1-212ENST00000618417 PBRM1Q86U86 1689 aa21.76■■□□□ 1.07
MKL1-212ENST00000618417 GAPVD1Q14C86 1478 aa21.76■■□□□ 1.07
MKL1-212ENST00000618417 SENP3Q9H4L4 574 aaPredicted RBP21.75■■□□□ 1.07
MKL1-212ENST00000618417 IGF1RP08069 1367 aa21.75■■□□□ 1.07
MKL1-212ENST00000618417 UBTFP17480 764 aaKnown RBP21.71■■□□□ 1.07
MKL1-212ENST00000618417 EHMT2Q96KQ7 1210 aa21.71■■□□□ 1.07
MKL1-212ENST00000618417 CARMIL1Q5VZK9 1371 aa21.7■■□□□ 1.06
MKL1-212ENST00000618417 CEP162Q5TB80 1403 aa21.67■■□□□ 1.06
MKL1-212ENST00000618417 TDRD9Q8NDG6 1382 aaKnown RBP21.66■■□□□ 1.06
MKL1-212ENST00000618417 EIF4G3O43432 1585 aaKnown RBP21.66■■□□□ 1.06
MKL1-212ENST00000618417 GRIN2BQ13224 1484 aa21.64■■□□□ 1.05
MKL1-212ENST00000618417 ADAMTS12P58397 1594 aa21.6■■□□□ 1.05
MKL1-212ENST00000618417 CTTNBP2Q8WZ74 1663 aa21.59■■□□□ 1.05
MKL1-212ENST00000618417 ZNF608Q9ULD9 1512 aaPredicted RBP21.57■■□□□ 1.04
MKL1-212ENST00000618417 AQRO60306 1485 aaKnown RBP eCLIP21.56■■□□□ 1.044e-6■□□□□ 10.8
MKL1-212ENST00000618417 FHAD1B1AJZ9 1412 aa21.55■■□□□ 1.04
MKL1-212ENST00000618417 CLIP1P30622 1438 aa21.53■■□□□ 1.04
MKL1-212ENST00000618417 MAGI1Q96QZ7 1491 aaPredicted RBP21.51■■□□□ 1.03
MKL1-212ENST00000618417 SNAPC4Q5SXM2 1469 aa21.46■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms