RNA–Protein interactions for RNA: ENST00000618301.4

PCDH15-232, Transcript of protocadherin related 15, humanhuman

TSL 5

Gene PCDH15, Length 1,461 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH15-232ENST00000618301 NISCHQ9Y2I1 1504 aa33.57■■■□□ 2.96
PCDH15-232ENST00000618301 CCDC180Q9P1Z9 1646 aa29.59■■■□□ 2.33
PCDH15-232ENST00000618301 ABCC9O60706 1549 aa28.63■■■□□ 2.17
PCDH15-232ENST00000618301 DCAF8L2P0C7V8 631 aa28.12■■■□□ 2.09
PCDH15-232ENST00000618301 ZCCHC6Q5VYS8 1495 aaKnown RBP28.06■■■□□ 2.08
PCDH15-232ENST00000618301 NACADO15069 1562 aa27.73■■■□□ 2.03
PCDH15-232ENST00000618301 DCAF1Q9Y4B6 1507 aa27.72■■■□□ 2.03
PCDH15-232ENST00000618301 RB1CC1Q8TDY2 1594 aa27.69■■■□□ 2.02
PCDH15-232ENST00000618301 MYO15BQ96JP2 1530 aa27.63■■■□□ 2.01
PCDH15-232ENST00000618301 SCRIBQ14160 1630 aa27.18■■□□□ 1.94
PCDH15-232ENST00000618301 SHROOM4Q9ULL8 1493 aa27.04■■□□□ 1.92
PCDH15-232ENST00000618301 UNC13AQ9UPW8 1703 aa26.96■■□□□ 1.91
PCDH15-232ENST00000618301 PABPN1Q86U42 306 aaKnown RBP eCLIP26.87■■□□□ 1.89
PCDH15-232ENST00000618301 BICRAQ9NZM4 1560 aa26.73■■□□□ 1.87
PCDH15-232ENST00000618301 AEBP2Q6ZN18 517 aaPredicted RBP26.38■■□□□ 1.81
PCDH15-232ENST00000618301 CECR2Q9BXF3 1484 aa26.11■■□□□ 1.77
PCDH15-232ENST00000618301 EIF4G1Q04637 1599 aaKnown RBP26.06■■□□□ 1.76
PCDH15-232ENST00000618301 BAZ1AQ9NRL2 1556 aaPredicted RBP26.02■■□□□ 1.76
PCDH15-232ENST00000618301 SMARCA4P51532 1647 aa25.96■■□□□ 1.75
PCDH15-232ENST00000618301 MROH2BQ7Z745 1585 aa25.9■■□□□ 1.74
PCDH15-232ENST00000618301 CC2D2AQ9P2K1 1620 aa25.84■■□□□ 1.73
PCDH15-232ENST00000618301 RSF1Q96T23 1441 aaPredicted RBP25.78■■□□□ 1.72
PCDH15-232ENST00000618301 SUPT5HO00267 1087 aaKnown RBP25.72■■□□□ 1.71
PCDH15-232ENST00000618301 DNAJC5BQ9UF47 199 aa25.71■■□□□ 1.71
PCDH15-232ENST00000618301 SMARCA2P51531 1590 aa25.7■■□□□ 1.71
PCDH15-232ENST00000618301 ATAD2BQ9ULI0 1458 aa25.69■■□□□ 1.7
PCDH15-232ENST00000618301 WIZO95785 1651 aa25.66■■□□□ 1.7
PCDH15-232ENST00000618301 PEG3Q9GZU2 1588 aa25.6■■□□□ 1.69
PCDH15-232ENST00000618301 BAZ1BQ9UIG0 1483 aaKnown RBP25.58■■□□□ 1.68
PCDH15-232ENST00000618301 NCAPD3P42695 1498 aa25.55■■□□□ 1.68
PCDH15-232ENST00000618301 HMGXB3Q12766 1538 aa25.5■■□□□ 1.67
PCDH15-232ENST00000618301 TOP2AP11388 1531 aaKnown RBP25.42■■□□□ 1.66
PCDH15-232ENST00000618301 CCDC88BA6NC98 1476 aa25.12■■□□□ 1.61
PCDH15-232ENST00000618301 CHIC1Q5VXU3 224 aa25.08■■□□□ 1.6
PCDH15-232ENST00000618301 CADPSQ9ULU8 1353 aa24.9■■□□□ 1.58
PCDH15-232ENST00000618301 NESP48681 1621 aa24.87■■□□□ 1.57
PCDH15-232ENST00000618301 LAMC3Q9Y6N6 1575 aa24.84■■□□□ 1.57
PCDH15-232ENST00000618301 CFTRP13569 1480 aa24.81■■□□□ 1.56
PCDH15-232ENST00000618301 PDS5BQ9NTI5 1447 aa24.72■■□□□ 1.55
PCDH15-232ENST00000618301 ERCC6Q03468 1493 aa24.7■■□□□ 1.54
PCDH15-232ENST00000618301 FANCD2Q9BXW9 1451 aa24.65■■□□□ 1.54
PCDH15-232ENST00000618301 PRDM2Q13029 1718 aa24.64■■□□□ 1.54
PCDH15-232ENST00000618301 CEP164Q9UPV0 1460 aa24.6■■□□□ 1.53
PCDH15-232ENST00000618301 KIF21AQ7Z4S6 1674 aa24.57■■□□□ 1.52
PCDH15-232ENST00000618301 MRC2Q9UBG0 1479 aa24.43■■□□□ 1.5
PCDH15-232ENST00000618301 ABCC8Q09428 1581 aa24.4■■□□□ 1.5
PCDH15-232ENST00000618301 WRNQ14191 1432 aaPredicted RBP eCLIP24.35■■□□□ 1.49
PCDH15-232ENST00000618301 THOC2Q8NI27 1593 aaKnown RBP24.33■■□□□ 1.49
PCDH15-232ENST00000618301 URB2Q14146 1524 aaKnown RBP24.33■■□□□ 1.48
PCDH15-232ENST00000618301 DNMBPQ6XZF7 1577 aa24.3■■□□□ 1.48
PCDH15-232ENST00000618301 TOPBP1Q92547 1522 aa24.28■■□□□ 1.48
PCDH15-232ENST00000618301 WDR62O43379 1518 aa24.27■■□□□ 1.48
PCDH15-232ENST00000618301 CUX1P39880 1505 aa24.27■■□□□ 1.48
PCDH15-232ENST00000618301 TRIM41Q8WV44 630 aa24.23■■□□□ 1.47
PCDH15-232ENST00000618301 SYNJ1O43426 1573 aa24.23■■□□□ 1.47
PCDH15-232ENST00000618301 TOP2BQ02880 1626 aa24.19■■□□□ 1.46
PCDH15-232ENST00000618301 BIVM-ERCC5R4GMW8 1640 aa24.16■■□□□ 1.46
PCDH15-232ENST00000618301 FGD5Q6ZNL6 1462 aa24.16■■□□□ 1.46
PCDH15-232ENST00000618301 CUX2O14529 1486 aa24.12■■□□□ 1.45
PCDH15-232ENST00000618301 POLA1P09884 1462 aaPredicted RBP24.11■■□□□ 1.45
PCDH15-232ENST00000618301 SOGA1O94964 1423 aa24.06■■□□□ 1.44
PCDH15-232ENST00000618301 RAD54L2Q9Y4B4 1467 aa24.04■■□□□ 1.44
PCDH15-232ENST00000618301 IFT140Q96RY7 1462 aa24.02■■□□□ 1.44
PCDH15-232ENST00000618301 TARBP1Q13395 1621 aaKnown RBP23.92■■□□□ 1.42
PCDH15-232ENST00000618301 ABCA10Q8WWZ4 1543 aa23.89■■□□□ 1.41
PCDH15-232ENST00000618301 TDRD9Q8NDG6 1382 aaKnown RBP23.88■■□□□ 1.41
PCDH15-232ENST00000618301 ZNF608Q9ULD9 1512 aaPredicted RBP23.86■■□□□ 1.41
PCDH15-232ENST00000618301 WDR97A6NE52 1622 aa23.84■■□□□ 1.41
PCDH15-232ENST00000618301 KIF27Q86VH2 1401 aa23.82■■□□□ 1.4
PCDH15-232ENST00000618301 AQRO60306 1485 aaKnown RBP eCLIP23.82■■□□□ 1.4
PCDH15-232ENST00000618301 EIF4G3O43432 1585 aaKnown RBP23.8■■□□□ 1.4
PCDH15-232ENST00000618301 FAM9AQ8IZU1 332 aaPredicted RBP23.79■■□□□ 1.4
PCDH15-232ENST00000618301 GAPVD1Q14C86 1478 aa23.78■■□□□ 1.4
PCDH15-232ENST00000618301 ABCA5Q8WWZ7 1642 aa23.74■■□□□ 1.39
PCDH15-232ENST00000618301 RUSC2Q8N2Y8 1516 aa23.71■■□□□ 1.39
PCDH15-232ENST00000618301 GRIN2BQ13224 1484 aa23.71■■□□□ 1.39
PCDH15-232ENST00000618301 EEA1Q15075 1411 aa23.67■■□□□ 1.38
PCDH15-232ENST00000618301 PBRM1Q86U86 1689 aa23.67■■□□□ 1.38
PCDH15-232ENST00000618301 SNAPC4Q5SXM2 1469 aa23.63■■□□□ 1.37
PCDH15-232ENST00000618301 ERICH3Q5RHP9 1530 aa23.62■■□□□ 1.37
PCDH15-232ENST00000618301 FBLN2P98095 1184 aa23.6■■□□□ 1.37
PCDH15-232ENST00000618301 CSRNP3Q8WYN3 585 aa23.6■■□□□ 1.37
PCDH15-232ENST00000618301 IGF1RP08069 1367 aa23.58■■□□□ 1.37
PCDH15-232ENST00000618301 MAGI1Q96QZ7 1491 aaPredicted RBP23.57■■□□□ 1.36
PCDH15-232ENST00000618301 CHMP7Q8WUX9 453 aaPredicted RBP23.54■■□□□ 1.36
PCDH15-232ENST00000618301 CUL7Q14999 1698 aa23.53■■□□□ 1.36
PCDH15-232ENST00000618301 CARMIL1Q5VZK9 1371 aa23.53■■□□□ 1.36
PCDH15-232ENST00000618301 EHMT2Q96KQ7 1210 aa23.52■■□□□ 1.36
PCDH15-232ENST00000618301 FHAD1B1AJZ9 1412 aa23.52■■□□□ 1.36
PCDH15-232ENST00000618301 ADAMTS12P58397 1594 aa23.51■■□□□ 1.35
PCDH15-232ENST00000618301 SYNJ2O15056 1496 aa23.48■■□□□ 1.35
PCDH15-232ENST00000618301 RAPGEF2Q9Y4G8 1499 aa23.43■■□□□ 1.34
PCDH15-232ENST00000618301 GRIN2AQ12879 1464 aa23.39■■□□□ 1.34
PCDH15-232ENST00000618301 PRXQ9BXM0 1461 aa23.39■■□□□ 1.34
PCDH15-232ENST00000618301 CHD1O14646 1710 aa23.39■■□□□ 1.33
PCDH15-232ENST00000618301 KIF21BO75037 1637 aa23.36■■□□□ 1.33
PCDH15-232ENST00000618301 UBTFP17480 764 aaKnown RBP23.34■■□□□ 1.33
PCDH15-232ENST00000618301 GOLGA3Q08378 1498 aa23.34■■□□□ 1.33
PCDH15-232ENST00000618301 OSCARQ8IYS5 282 aa23.28■■□□□ 1.32
PCDH15-232ENST00000618301 CEP170Q5SW79 1584 aa23.23■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 89.8 ms