RNA–Protein interactions for RNA: ENST00000617094.1

PCDHGC4-203, Transcript of protocadherin gamma subfamily C, 4, humanhuman

APPRIS ALT2 BASIC

Gene PCDHGC4, Length 2,793 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC4-203ENST00000617094 NISCHQ9Y2I1 1504 aa25.98■■□□□ 1.75
PCDHGC4-203ENST00000617094 CCDC180Q9P1Z9 1646 aa22.49■■□□□ 1.19
PCDHGC4-203ENST00000617094 ZCCHC6Q5VYS8 1495 aaKnown RBP21.82■■□□□ 1.08
PCDHGC4-203ENST00000617094 DCAF8L2P0C7V8 631 aa21.8■■□□□ 1.08
PCDHGC4-203ENST00000617094 SHROOM4Q9ULL8 1493 aa21.63■■□□□ 1.05
PCDHGC4-203ENST00000617094 ABCC9O60706 1549 aa21.55■■□□□ 1.04
PCDHGC4-203ENST00000617094 DCAF1Q9Y4B6 1507 aa21.27■■□□□ 1
PCDHGC4-203ENST00000617094 SCRIBQ14160 1630 aa21■□□□□ 0.95
PCDHGC4-203ENST00000617094 NACADO15069 1562 aa20.94■□□□□ 0.94
PCDHGC4-203ENST00000617094 MYO15BQ96JP2 1530 aa20.94■□□□□ 0.94
PCDHGC4-203ENST00000617094 RB1CC1Q8TDY2 1594 aa20.8■□□□□ 0.92
PCDHGC4-203ENST00000617094 SUPT5HO00267 1087 aaKnown RBP20.79■□□□□ 0.92
PCDHGC4-203ENST00000617094 UNC13AQ9UPW8 1703 aa20.59■□□□□ 0.89
PCDHGC4-203ENST00000617094 PABPN1Q86U42 306 aaKnown RBP eCLIP20.43■□□□□ 0.86
PCDHGC4-203ENST00000617094 CECR2Q9BXF3 1484 aa20.37■□□□□ 0.85
PCDHGC4-203ENST00000617094 BICRAQ9NZM4 1560 aa20.3■□□□□ 0.84
PCDHGC4-203ENST00000617094 RSF1Q96T23 1441 aaPredicted RBP20.25■□□□□ 0.83
PCDHGC4-203ENST00000617094 MROH2BQ7Z745 1585 aa20.2■□□□□ 0.82
PCDHGC4-203ENST00000617094 WIZO95785 1651 aa20.09■□□□□ 0.81
PCDHGC4-203ENST00000617094 BAZ1AQ9NRL2 1556 aaPredicted RBP20.01■□□□□ 0.79
PCDHGC4-203ENST00000617094 SMARCA4P51532 1647 aa19.99■□□□□ 0.79
PCDHGC4-203ENST00000617094 CHIC1Q5VXU3 224 aa19.78■□□□□ 0.76
PCDHGC4-203ENST00000617094 TOP2AP11388 1531 aaKnown RBP19.69■□□□□ 0.74
PCDHGC4-203ENST00000617094 EIF4G1Q04637 1599 aaKnown RBP19.66■□□□□ 0.74
PCDHGC4-203ENST00000617094 ATAD2BQ9ULI0 1458 aa19.64■□□□□ 0.73
PCDHGC4-203ENST00000617094 PEG3Q9GZU2 1588 aa19.6■□□□□ 0.73
PCDHGC4-203ENST00000617094 CCDC88BA6NC98 1476 aa19.6■□□□□ 0.73
PCDHGC4-203ENST00000617094 SMARCA2P51531 1590 aa19.59■□□□□ 0.73
PCDHGC4-203ENST00000617094 BAZ1BQ9UIG0 1483 aaKnown RBP19.54■□□□□ 0.72
PCDHGC4-203ENST00000617094 CC2D2AQ9P2K1 1620 aa19.41■□□□□ 0.7
PCDHGC4-203ENST00000617094 TRIM41Q8WV44 630 aa19.38■□□□□ 0.69
PCDHGC4-203ENST00000617094 NCAPD3P42695 1498 aa19.37■□□□□ 0.69
PCDHGC4-203ENST00000617094 ABCC8Q09428 1581 aa19.35■□□□□ 0.69
PCDHGC4-203ENST00000617094 HMGXB3Q12766 1538 aa19.31■□□□□ 0.68
PCDHGC4-203ENST00000617094 FAM9AQ8IZU1 332 aaPredicted RBP19.26■□□□□ 0.67
PCDHGC4-203ENST00000617094 LOC105371045A0A1W2PR82 267 aa19.22■□□□□ 0.67
PCDHGC4-203ENST00000617094 DNAJC5BQ9UF47 199 aa19.2■□□□□ 0.66
PCDHGC4-203ENST00000617094 EHMT2Q96KQ7 1210 aa19.18■□□□□ 0.66
PCDHGC4-203ENST00000617094 SYNJ1O43426 1573 aa19.04■□□□□ 0.64
PCDHGC4-203ENST00000617094 WRNQ14191 1432 aaPredicted RBP eCLIP19.03■□□□□ 0.64
PCDHGC4-203ENST00000617094 CFTRP13569 1480 aa19■□□□□ 0.63
PCDHGC4-203ENST00000617094 NESP48681 1621 aa18.97■□□□□ 0.63
PCDHGC4-203ENST00000617094 SOGA1O94964 1423 aa18.96■□□□□ 0.63
PCDHGC4-203ENST00000617094 RUSC2Q8N2Y8 1516 aa18.95■□□□□ 0.62
PCDHGC4-203ENST00000617094 CADPSQ9ULU8 1353 aa18.94■□□□□ 0.62
PCDHGC4-203ENST00000617094 PRDM2Q13029 1718 aa18.89■□□□□ 0.61
PCDHGC4-203ENST00000617094 CUX1P39880 1505 aa18.85■□□□□ 0.61
PCDHGC4-203ENST00000617094 TOP2BQ02880 1626 aa18.83■□□□□ 0.61
PCDHGC4-203ENST00000617094 BIVM-ERCC5R4GMW8 1640 aa18.79■□□□□ 0.6
PCDHGC4-203ENST00000617094 FANCD2Q9BXW9 1451 aa18.78■□□□□ 0.6
PCDHGC4-203ENST00000617094 CSRNP3Q8WYN3 585 aa18.7■□□□□ 0.58
PCDHGC4-203ENST00000617094 LAMC3Q9Y6N6 1575 aa18.69■□□□□ 0.58
PCDHGC4-203ENST00000617094 KIF21AQ7Z4S6 1674 aa18.68■□□□□ 0.58
PCDHGC4-203ENST00000617094 FGD5Q6ZNL6 1462 aa18.63■□□□□ 0.57
PCDHGC4-203ENST00000617094 CEP164Q9UPV0 1460 aa18.62■□□□□ 0.57
PCDHGC4-203ENST00000617094 EEA1Q15075 1411 aa18.6■□□□□ 0.57
PCDHGC4-203ENST00000617094 UBTFP17480 764 aaKnown RBP18.59■□□□□ 0.57
PCDHGC4-203ENST00000617094 URB2Q14146 1524 aaKnown RBP18.58■□□□□ 0.57
PCDHGC4-203ENST00000617094 TOPBP1Q92547 1522 aa18.58■□□□□ 0.57
PCDHGC4-203ENST00000617094 RAD54L2Q9Y4B4 1467 aa18.57■□□□□ 0.56
PCDHGC4-203ENST00000617094 PDS5BQ9NTI5 1447 aa18.56■□□□□ 0.56
PCDHGC4-203ENST00000617094 DNMBPQ6XZF7 1577 aa18.56■□□□□ 0.56
PCDHGC4-203ENST00000617094 CUX2O14529 1486 aa18.53■□□□□ 0.56
PCDHGC4-203ENST00000617094 RAPGEF2Q9Y4G8 1499 aa18.53■□□□□ 0.56
PCDHGC4-203ENST00000617094 RANGAP1P46060 587 aaPredicted RBP18.53■□□□□ 0.56
PCDHGC4-203ENST00000617094 POLA1P09884 1462 aaPredicted RBP18.52■□□□□ 0.56
PCDHGC4-203ENST00000617094 GOLGA3Q08378 1498 aa18.5■□□□□ 0.55
PCDHGC4-203ENST00000617094 KIF27Q86VH2 1401 aa18.5■□□□□ 0.55
PCDHGC4-203ENST00000617094 KIF21BO75037 1637 aa18.47■□□□□ 0.55
PCDHGC4-203ENST00000617094 PPARGC1BQ86YN6 1023 aaKnown RBP18.46■□□□□ 0.55
PCDHGC4-203ENST00000617094 CEP162Q5TB80 1403 aa18.45■□□□□ 0.54
PCDHGC4-203ENST00000617094 TNIKQ9UKE5 1360 aa18.43■□□□□ 0.54
PCDHGC4-203ENST00000617094 PRXQ9BXM0 1461 aa18.39■□□□□ 0.53
PCDHGC4-203ENST00000617094 IGF1RP08069 1367 aa18.39■□□□□ 0.53
PCDHGC4-203ENST00000617094 TDRD9Q8NDG6 1382 aaKnown RBP18.38■□□□□ 0.53
PCDHGC4-203ENST00000617094 ERCC6Q03468 1493 aa18.38■□□□□ 0.53
PCDHGC4-203ENST00000617094 PCGF6Q9BYE7 350 aa18.37■□□□□ 0.53
PCDHGC4-203ENST00000617094 MRC2Q9UBG0 1479 aa18.36■□□□□ 0.53
PCDHGC4-203ENST00000617094 ABCA10Q8WWZ4 1543 aa18.36■□□□□ 0.53
PCDHGC4-203ENST00000617094 WDR97A6NE52 1622 aa18.34■□□□□ 0.53
PCDHGC4-203ENST00000617094 TTBK1Q5TCY1 1321 aaPredicted RBP18.33■□□□□ 0.52
PCDHGC4-203ENST00000617094 ERICH3Q5RHP9 1530 aa18.3■□□□□ 0.52
PCDHGC4-203ENST00000617094 TARBP1Q13395 1621 aaKnown RBP18.3■□□□□ 0.52
PCDHGC4-203ENST00000617094 CARMIL1Q5VZK9 1371 aa18.29■□□□□ 0.52
PCDHGC4-203ENST00000617094 CLIP1P30622 1438 aa18.27■□□□□ 0.52
PCDHGC4-203ENST00000617094 WDR62O43379 1518 aa18.25■□□□□ 0.51
PCDHGC4-203ENST00000617094 AQRO60306 1485 aaKnown RBP eCLIP18.25■□□□□ 0.51
PCDHGC4-203ENST00000617094 THOC2Q8NI27 1593 aaKnown RBP18.25■□□□□ 0.51
PCDHGC4-203ENST00000617094 ABCA5Q8WWZ7 1642 aa18.24■□□□□ 0.51
PCDHGC4-203ENST00000617094 GAPVD1Q14C86 1478 aa18.23■□□□□ 0.51
PCDHGC4-203ENST00000617094 ZNF608Q9ULD9 1512 aaPredicted RBP18.23■□□□□ 0.51
PCDHGC4-203ENST00000617094 PBRM1Q86U86 1689 aa18.16■□□□□ 0.5
PCDHGC4-203ENST00000617094 CUL7Q14999 1698 aa18.13■□□□□ 0.49
PCDHGC4-203ENST00000617094 TRIM26Q12899 539 aaPredicted RBP18.13■□□□□ 0.49
PCDHGC4-203ENST00000617094 ARAP1Q96P48 1450 aa18.11■□□□□ 0.49
PCDHGC4-203ENST00000617094 P3H3Q8IVL6 736 aa18.11■□□□□ 0.49
PCDHGC4-203ENST00000617094 IFT140Q96RY7 1462 aa18.11■□□□□ 0.49
PCDHGC4-203ENST00000617094 ARHGAP35Q9NRY4 1499 aa18.09■□□□□ 0.49
PCDHGC4-203ENST00000617094 EIF4G3O43432 1585 aaKnown RBP18.08■□□□□ 0.48
PCDHGC4-203ENST00000617094 VPS8Q8N3P4 1428 aa18.07■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms