RNA–Protein interactions for RNA: ENST00000617022.4

DDB2-212, Transcript of damage specific DNA binding protein 2, humanhuman

TSL 2

Gene DDB2, Length 2,181 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB2-212ENST00000617022 NISCHQ9Y2I1 1504 aa36.55■■■■□ 3.44
DDB2-212ENST00000617022 CCDC180Q9P1Z9 1646 aa31.97■■■□□ 2.71
DDB2-212ENST00000617022 ZCCHC6Q5VYS8 1495 aaKnown RBP30.66■■■□□ 2.5
DDB2-212ENST00000617022 ABCC9O60706 1549 aa30.55■■■□□ 2.48
DDB2-212ENST00000617022 DCAF8L2P0C7V8 631 aa30.35■■■□□ 2.45
DDB2-212ENST00000617022 DCAF1Q9Y4B6 1507 aa30.18■■■□□ 2.42
DDB2-212ENST00000617022 MYO15BQ96JP2 1530 aa29.91■■■□□ 2.38
DDB2-212ENST00000617022 NACADO15069 1562 aa29.84■■■□□ 2.37
DDB2-212ENST00000617022 SHROOM4Q9ULL8 1493 aa29.71■■■□□ 2.35
DDB2-212ENST00000617022 RB1CC1Q8TDY2 1594 aa29.66■■■□□ 2.34
DDB2-212ENST00000617022 SCRIBQ14160 1630 aa29.43■■■□□ 2.3
DDB2-212ENST00000617022 UNC13AQ9UPW8 1703 aa29.08■■■□□ 2.25
DDB2-212ENST00000617022 BICRAQ9NZM4 1560 aa28.79■■■□□ 2.2
DDB2-212ENST00000617022 PABPN1Q86U42 306 aaKnown RBP eCLIP28.77■■■□□ 2.2
DDB2-212ENST00000617022 CECR2Q9BXF3 1484 aa28.46■■■□□ 2.15
DDB2-212ENST00000617022 SUPT5HO00267 1087 aaKnown RBP28.44■■■□□ 2.14
DDB2-212ENST00000617022 RSF1Q96T23 1441 aaPredicted RBP28.27■■■□□ 2.12
DDB2-212ENST00000617022 MROH2BQ7Z745 1585 aa28.25■■■□□ 2.11
DDB2-212ENST00000617022 BAZ1AQ9NRL2 1556 aaPredicted RBP28.24■■■□□ 2.11
DDB2-212ENST00000617022 SMARCA4P51532 1647 aa28.16■■■□□ 2.1
DDB2-212ENST00000617022 WIZO95785 1651 aa28.02■■■□□ 2.08
DDB2-212ENST00000617022 EIF4G1Q04637 1599 aaKnown RBP27.96■■■□□ 2.07
DDB2-212ENST00000617022 PEG3Q9GZU2 1588 aa27.8■■■□□ 2.04
DDB2-212ENST00000617022 ATAD2BQ9ULI0 1458 aa27.76■■■□□ 2.03
DDB2-212ENST00000617022 SMARCA2P51531 1590 aa27.72■■■□□ 2.03
DDB2-212ENST00000617022 TOP2AP11388 1531 aaKnown RBP27.69■■■□□ 2.02
DDB2-212ENST00000617022 CC2D2AQ9P2K1 1620 aa27.61■■■□□ 2.01
DDB2-212ENST00000617022 BAZ1BQ9UIG0 1483 aaKnown RBP27.6■■■□□ 2.01
DDB2-212ENST00000617022 NCAPD3P42695 1498 aa27.55■■■□□ 2
DDB2-212ENST00000617022 HMGXB3Q12766 1538 aa27.49■■□□□ 1.99
DDB2-212ENST00000617022 CCDC88BA6NC98 1476 aa27.42■■□□□ 1.98
DDB2-212ENST00000617022 DNAJC5BQ9UF47 199 aa27.19■■□□□ 1.94
DDB2-212ENST00000617022 CHIC1Q5VXU3 224 aa27.05■■□□□ 1.92
DDB2-212ENST00000617022 CFTRP13569 1480 aa26.88■■□□□ 1.89
DDB2-212ENST00000617022 CADPSQ9ULU8 1353 aa26.84■■□□□ 1.89
DDB2-212ENST00000617022 ABCC8Q09428 1581 aa26.79■■□□□ 1.88
DDB2-212ENST00000617022 NESP48681 1621 aa26.74■■□□□ 1.87
DDB2-212ENST00000617022 TRIM41Q8WV44 630 aa26.73■■□□□ 1.87
DDB2-212ENST00000617022 PRDM2Q13029 1718 aa26.7■■□□□ 1.87
DDB2-212ENST00000617022 LAMC3Q9Y6N6 1575 aa26.66■■□□□ 1.86
DDB2-212ENST00000617022 WRNQ14191 1432 aaPredicted RBP eCLIP26.62■■□□□ 1.85
DDB2-212ENST00000617022 FANCD2Q9BXW9 1451 aa26.56■■□□□ 1.84
DDB2-212ENST00000617022 SYNJ1O43426 1573 aa26.53■■□□□ 1.84
DDB2-212ENST00000617022 PDS5BQ9NTI5 1447 aa26.47■■□□□ 1.83
DDB2-212ENST00000617022 CUX1P39880 1505 aa26.43■■□□□ 1.82
DDB2-212ENST00000617022 CEP164Q9UPV0 1460 aa26.42■■□□□ 1.82
DDB2-212ENST00000617022 TOP2BQ02880 1626 aa26.41■■□□□ 1.82
DDB2-212ENST00000617022 KIF21AQ7Z4S6 1674 aa26.39■■□□□ 1.82
DDB2-212ENST00000617022 BIVM-ERCC5R4GMW8 1640 aa26.39■■□□□ 1.81
DDB2-212ENST00000617022 FAM9AQ8IZU1 332 aaPredicted RBP26.29■■□□□ 1.8
DDB2-212ENST00000617022 DNMBPQ6XZF7 1577 aa26.26■■□□□ 1.79
DDB2-212ENST00000617022 URB2Q14146 1524 aaKnown RBP26.25■■□□□ 1.79
DDB2-212ENST00000617022 TOPBP1Q92547 1522 aa26.24■■□□□ 1.79
DDB2-212ENST00000617022 SOGA1O94964 1423 aa26.23■■□□□ 1.79
DDB2-212ENST00000617022 ERCC6Q03468 1493 aa26.2■■□□□ 1.79
DDB2-212ENST00000617022 FGD5Q6ZNL6 1462 aa26.19■■□□□ 1.78
DDB2-212ENST00000617022 RUSC2Q8N2Y8 1516 aa26.15■■□□□ 1.78
DDB2-212ENST00000617022 MRC2Q9UBG0 1479 aa26.15■■□□□ 1.78
DDB2-212ENST00000617022 POLA1P09884 1462 aaPredicted RBP26.1■■□□□ 1.77
DDB2-212ENST00000617022 EEA1Q15075 1411 aa26.05■■□□□ 1.76
DDB2-212ENST00000617022 LOC105371045A0A1W2PR82 267 aa26.04■■□□□ 1.76
DDB2-212ENST00000617022 RAD54L2Q9Y4B4 1467 aa26.04■■□□□ 1.76
DDB2-212ENST00000617022 WDR62O43379 1518 aa26.02■■□□□ 1.76
DDB2-212ENST00000617022 THOC2Q8NI27 1593 aaKnown RBP26.02■■□□□ 1.76
DDB2-212ENST00000617022 CSRNP3Q8WYN3 585 aa25.97■■□□□ 1.75
DDB2-212ENST00000617022 CUX2O14529 1486 aa25.97■■□□□ 1.75
DDB2-212ENST00000617022 EHMT2Q96KQ7 1210 aa25.97■■□□□ 1.75
DDB2-212ENST00000617022 KIF27Q86VH2 1401 aa25.95■■□□□ 1.75
DDB2-212ENST00000617022 ABCA10Q8WWZ4 1543 aa25.92■■□□□ 1.74
DDB2-212ENST00000617022 WDR97A6NE52 1622 aa25.87■■□□□ 1.73
DDB2-212ENST00000617022 TARBP1Q13395 1621 aaKnown RBP25.86■■□□□ 1.73
DDB2-212ENST00000617022 TDRD9Q8NDG6 1382 aaKnown RBP25.8■■□□□ 1.72
DDB2-212ENST00000617022 IFT140Q96RY7 1462 aa25.78■■□□□ 1.72
DDB2-212ENST00000617022 IGF1RP08069 1367 aa25.75■■□□□ 1.71
DDB2-212ENST00000617022 KIF21BO75037 1637 aa25.75■■□□□ 1.71
DDB2-212ENST00000617022 ABCA5Q8WWZ7 1642 aa25.74■■□□□ 1.71
DDB2-212ENST00000617022 GOLGA3Q08378 1498 aa25.72■■□□□ 1.71
DDB2-212ENST00000617022 GAPVD1Q14C86 1478 aa25.71■■□□□ 1.71
DDB2-212ENST00000617022 PRXQ9BXM0 1461 aa25.71■■□□□ 1.71
DDB2-212ENST00000617022 ZNF608Q9ULD9 1512 aaPredicted RBP25.7■■□□□ 1.7
DDB2-212ENST00000617022 RAPGEF2Q9Y4G8 1499 aa25.7■■□□□ 1.7
DDB2-212ENST00000617022 AQRO60306 1485 aaKnown RBP eCLIP25.68■■□□□ 1.71e-7■■■■■ 29.2
DDB2-212ENST00000617022 UBTFP17480 764 aaKnown RBP25.65■■□□□ 1.7
DDB2-212ENST00000617022 CARMIL1Q5VZK9 1371 aa25.63■■□□□ 1.69
DDB2-212ENST00000617022 ERICH3Q5RHP9 1530 aa25.62■■□□□ 1.69
DDB2-212ENST00000617022 EIF4G3O43432 1585 aaKnown RBP25.59■■□□□ 1.69
DDB2-212ENST00000617022 PBRM1Q86U86 1689 aa25.59■■□□□ 1.69
DDB2-212ENST00000617022 TNIKQ9UKE5 1360 aa25.56■■□□□ 1.68
DDB2-212ENST00000617022 CUL7Q14999 1698 aa25.56■■□□□ 1.68
DDB2-212ENST00000617022 GRIN2BQ13224 1484 aa25.54■■□□□ 1.68
DDB2-212ENST00000617022 HRCP23327 699 aa25.45■■□□□ 1.66
DDB2-212ENST00000617022 CEP162Q5TB80 1403 aa25.44■■□□□ 1.66
DDB2-212ENST00000617022 ADAMTS12P58397 1594 aa25.44■■□□□ 1.66
DDB2-212ENST00000617022 SNAPC4Q5SXM2 1469 aa25.43■■□□□ 1.66
DDB2-212ENST00000617022 FHAD1B1AJZ9 1412 aa25.42■■□□□ 1.66
DDB2-212ENST00000617022 RANGAP1P46060 587 aaPredicted RBP25.37■■□□□ 1.65
DDB2-212ENST00000617022 MAGI1Q96QZ7 1491 aaPredicted RBP25.35■■□□□ 1.65
DDB2-212ENST00000617022 CLIP1P30622 1438 aa25.31■■□□□ 1.64
DDB2-212ENST00000617022 SYNJ2O15056 1496 aa25.27■■□□□ 1.64
DDB2-212ENST00000617022 CTTNBP2Q8WZ74 1663 aa25.26■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 76.3 ms