RNA–Protein interactions for RNA: ENST00000616051.1

RCC1L-204, Transcript of RCC1 like, humanhuman

TSL 2

Gene RCC1L, Length 1,610 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCC1L-204ENST00000616051 NISCHQ9Y2I1 1504 aa65.68■■■■■ 8.1
RCC1L-204ENST00000616051 CCDC180Q9P1Z9 1646 aa57.98■■■■■ 6.87
RCC1L-204ENST00000616051 ABCC9O60706 1549 aa55.98■■■■■ 6.55
RCC1L-204ENST00000616051 ZCCHC6Q5VYS8 1495 aaKnown RBP54.87■■■■■ 6.37
RCC1L-204ENST00000616051 DCAF8L2P0C7V8 631 aa54.59■■■■■ 6.33
RCC1L-204ENST00000616051 DCAF1Q9Y4B6 1507 aa54.35■■■■■ 6.29
RCC1L-204ENST00000616051 NACADO15069 1562 aa54.33■■■■■ 6.29
RCC1L-204ENST00000616051 MYO15BQ96JP2 1530 aa54.26■■■■■ 6.28
RCC1L-204ENST00000616051 RB1CC1Q8TDY2 1594 aa54.17■■■■■ 6.26
RCC1L-204ENST00000616051 UNC13AQ9UPW8 1703 aa53.04■■■■■ 6.08
RCC1L-204ENST00000616051 SCRIBQ14160 1630 aa53.01■■■■■ 6.08
RCC1L-204ENST00000616051 BICRAQ9NZM4 1560 aa52.55■■■■■ 6
RCC1L-204ENST00000616051 PABPN1Q86U42 306 aaKnown RBP eCLIP52.5■■■■■ 5.99
RCC1L-204ENST00000616051 SHROOM4Q9ULL8 1493 aa52.44■■■■■ 5.99
RCC1L-204ENST00000616051 CECR2Q9BXF3 1484 aa51.11■■■■■ 5.77
RCC1L-204ENST00000616051 EIF4G1Q04637 1599 aaKnown RBP51.07■■■■■ 5.77
RCC1L-204ENST00000616051 BAZ1AQ9NRL2 1556 aaPredicted RBP50.83■■■■■ 5.73
RCC1L-204ENST00000616051 SMARCA4P51532 1647 aa50.78■■■■■ 5.72
RCC1L-204ENST00000616051 DNAJC5BQ9UF47 199 aa50.69■■■■■ 5.71
RCC1L-204ENST00000616051 CC2D2AQ9P2K1 1620 aa50.67■■■■■ 5.7
RCC1L-204ENST00000616051 MROH2BQ7Z745 1585 aa50.65■■■■■ 5.7
RCC1L-204ENST00000616051 RSF1Q96T23 1441 aaPredicted RBP50.38■■■■■ 5.66
RCC1L-204ENST00000616051 ATAD2BQ9ULI0 1458 aa50.3■■■■■ 5.64
RCC1L-204ENST00000616051 PEG3Q9GZU2 1588 aa50.25■■■■■ 5.64
RCC1L-204ENST00000616051 SMARCA2P51531 1590 aa50.25■■■■■ 5.63
RCC1L-204ENST00000616051 WIZO95785 1651 aa50.17■■■■■ 5.62
RCC1L-204ENST00000616051 NCAPD3P42695 1498 aa50.13■■■■■ 5.62
RCC1L-204ENST00000616051 HMGXB3Q12766 1538 aa49.93■■■■■ 5.58
RCC1L-204ENST00000616051 BAZ1BQ9UIG0 1483 aaKnown RBP49.91■■■■■ 5.58
RCC1L-204ENST00000616051 SUPT5HO00267 1087 aaKnown RBP49.78■■■■■ 5.56
RCC1L-204ENST00000616051 TOP2AP11388 1531 aaKnown RBP49.63■■■■■ 5.54
RCC1L-204ENST00000616051 CCDC88BA6NC98 1476 aa49.09■■■■■ 5.45
RCC1L-204ENST00000616051 CADPSQ9ULU8 1353 aa48.73■■■■■ 5.39
RCC1L-204ENST00000616051 NESP48681 1621 aa48.71■■■■■ 5.39
RCC1L-204ENST00000616051 LAMC3Q9Y6N6 1575 aa48.66■■■■■ 5.38
RCC1L-204ENST00000616051 CFTRP13569 1480 aa48.62■■■■■ 5.37
RCC1L-204ENST00000616051 PRDM2Q13029 1718 aa48.31■■■■■ 5.32
RCC1L-204ENST00000616051 PDS5BQ9NTI5 1447 aa48.31■■■■■ 5.32
RCC1L-204ENST00000616051 FANCD2Q9BXW9 1451 aa48.16■■■■■ 5.3
RCC1L-204ENST00000616051 KIF21AQ7Z4S6 1674 aa48.15■■■■■ 5.3
RCC1L-204ENST00000616051 ERCC6Q03468 1493 aa48.15■■■■■ 5.3
RCC1L-204ENST00000616051 CEP164Q9UPV0 1460 aa48■■■■■ 5.28
RCC1L-204ENST00000616051 MRC2Q9UBG0 1479 aa47.76■■■■■ 5.24
RCC1L-204ENST00000616051 THOC2Q8NI27 1593 aaKnown RBP47.75■■■■■ 5.23
RCC1L-204ENST00000616051 URB2Q14146 1524 aaKnown RBP47.64■■■■■ 5.22
RCC1L-204ENST00000616051 WDR62O43379 1518 aa47.58■■■■■ 5.21
RCC1L-204ENST00000616051 ABCC8Q09428 1581 aa47.55■■■■■ 5.2
RCC1L-204ENST00000616051 TOPBP1Q92547 1522 aa47.49■■■■■ 5.19
RCC1L-204ENST00000616051 DNMBPQ6XZF7 1577 aa47.49■■■■■ 5.19
RCC1L-204ENST00000616051 CUX1P39880 1505 aa47.46■■■■■ 5.19
RCC1L-204ENST00000616051 WRNQ14191 1432 aaPredicted RBP eCLIP47.46■■■■■ 5.19
RCC1L-204ENST00000616051 CUX2O14529 1486 aa47.32■■■■■ 5.17
RCC1L-204ENST00000616051 SYNJ1O43426 1573 aa47.31■■■■■ 5.16
RCC1L-204ENST00000616051 TOP2BQ02880 1626 aa47.26■■■■■ 5.16
RCC1L-204ENST00000616051 BIVM-ERCC5R4GMW8 1640 aa47.25■■■■■ 5.15
RCC1L-204ENST00000616051 FGD5Q6ZNL6 1462 aa47.16■■■■■ 5.14
RCC1L-204ENST00000616051 POLA1P09884 1462 aaPredicted RBP47.15■■■■■ 5.14
RCC1L-204ENST00000616051 SOGA1O94964 1423 aa46.99■■■■■ 5.11
RCC1L-204ENST00000616051 IFT140Q96RY7 1462 aa46.97■■■■■ 5.11
RCC1L-204ENST00000616051 RAD54L2Q9Y4B4 1467 aa46.96■■■■■ 5.11
RCC1L-204ENST00000616051 CHIC1Q5VXU3 224 aa46.96■■■■■ 5.11
RCC1L-204ENST00000616051 TRIM41Q8WV44 630 aa46.95■■■■■ 5.11
RCC1L-204ENST00000616051 TARBP1Q13395 1621 aaKnown RBP46.92■■■■■ 5.1
RCC1L-204ENST00000616051 ABCA10Q8WWZ4 1543 aa46.73■■■■■ 5.07
RCC1L-204ENST00000616051 ZNF608Q9ULD9 1512 aaPredicted RBP46.73■■■■■ 5.07
RCC1L-204ENST00000616051 WDR97A6NE52 1622 aa46.72■■■■■ 5.07
RCC1L-204ENST00000616051 TDRD9Q8NDG6 1382 aaKnown RBP46.64■■■■■ 5.06
RCC1L-204ENST00000616051 AQRO60306 1485 aaKnown RBP eCLIP46.58■■■■■ 5.051e-7■■■■■ 30.9
RCC1L-204ENST00000616051 EIF4G3O43432 1585 aaKnown RBP46.54■■■■■ 5.04
RCC1L-204ENST00000616051 ABCA5Q8WWZ7 1642 aa46.47■■■■■ 5.03
RCC1L-204ENST00000616051 GAPVD1Q14C86 1478 aa46.45■■■■■ 5.03
RCC1L-204ENST00000616051 KIF27Q86VH2 1401 aa46.39■■■■■ 5.02
RCC1L-204ENST00000616051 GRIN2BQ13224 1484 aa46.3■■■■■ 5
RCC1L-204ENST00000616051 RUSC2Q8N2Y8 1516 aa46.3■■■■■ 5
RCC1L-204ENST00000616051 PBRM1Q86U86 1689 aa46.29■■■■■ 5
RCC1L-204ENST00000616051 ERICH3Q5RHP9 1530 aa46.18■■■■■ 4.98
RCC1L-204ENST00000616051 IGF1RP08069 1367 aa46.15■■■■■ 4.98
RCC1L-204ENST00000616051 SNAPC4Q5SXM2 1469 aa46.13■■■■■ 4.98
RCC1L-204ENST00000616051 MAGI1Q96QZ7 1491 aaPredicted RBP46.09■■■■■ 4.97
RCC1L-204ENST00000616051 EEA1Q15075 1411 aa46.05■■■■■ 4.96
RCC1L-204ENST00000616051 FAM9AQ8IZU1 332 aaPredicted RBP45.99■■■■■ 4.95
RCC1L-204ENST00000616051 ADAMTS12P58397 1594 aa45.95■■■■■ 4.95
RCC1L-204ENST00000616051 CSRNP3Q8WYN3 585 aa45.93■■■■■ 4.94
RCC1L-204ENST00000616051 FHAD1B1AJZ9 1412 aa45.93■■■■■ 4.94
RCC1L-204ENST00000616051 CUL7Q14999 1698 aa45.92■■■■■ 4.94
RCC1L-204ENST00000616051 SYNJ2O15056 1496 aa45.9■■■■■ 4.94
RCC1L-204ENST00000616051 CARMIL1Q5VZK9 1371 aa45.88■■■■■ 4.94
RCC1L-204ENST00000616051 FBLN2P98095 1184 aa45.85■■■■■ 4.93
RCC1L-204ENST00000616051 CHMP7Q8WUX9 453 aaPredicted RBP45.85■■■■■ 4.93
RCC1L-204ENST00000616051 CHD1O14646 1710 aa45.83■■■■■ 4.93
RCC1L-204ENST00000616051 PRXQ9BXM0 1461 aa45.73■■■■■ 4.91
RCC1L-204ENST00000616051 GRIN2AQ12879 1464 aa45.72■■■■■ 4.91
RCC1L-204ENST00000616051 RAPGEF2Q9Y4G8 1499 aa45.67■■■■■ 4.9
RCC1L-204ENST00000616051 OSCARQ8IYS5 282 aa45.58■■■■■ 4.89
RCC1L-204ENST00000616051 KIF21BO75037 1637 aa45.52■■■■■ 4.88
RCC1L-204ENST00000616051 NUP160Q12769 1436 aa45.48■■■■■ 4.87
RCC1L-204ENST00000616051 CEP170Q5SW79 1584 aa45.47■■■■■ 4.87
RCC1L-204ENST00000616051 EHMT2Q96KQ7 1210 aa45.34■■■■■ 4.85
RCC1L-204ENST00000616051 CLASP1Q7Z460 1538 aa45.32■■■■■ 4.84
RCC1L-204ENST00000616051 GOLGA3Q08378 1498 aa45.31■■■■■ 4.84
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms