RNA–Protein interactions for RNA: ENST00000615945.4

TMC4-208, Transcript of transmembrane channel like 4, humanhuman

TSL 2

Gene TMC4, Length 506 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMC4-208ENST00000615945 NISCHQ9Y2I1 1504 aa15.18■□□□□ 0.02
TMC4-208ENST00000615945 ABCC9O60706 1549 aa14.75□□□□□ -0.05
TMC4-208ENST00000615945 DNAJC5BQ9UF47 199 aa14.56□□□□□ -0.08
TMC4-208ENST00000615945 CCDC180Q9P1Z9 1646 aa14.03□□□□□ -0.16
TMC4-208ENST00000615945 DNAJC5Q9H3Z4 198 aa13.84□□□□□ -0.19
TMC4-208ENST00000615945 RB1CC1Q8TDY2 1594 aa13.66□□□□□ -0.22
TMC4-208ENST00000615945 UNC13AQ9UPW8 1703 aa13.57□□□□□ -0.24
TMC4-208ENST00000615945 PABPN1Q86U42 306 aaKnown RBP eCLIP13.55□□□□□ -0.24
TMC4-208ENST00000615945 BICRAQ9NZM4 1560 aa13.41□□□□□ -0.26
TMC4-208ENST00000615945 NACADO15069 1562 aa13.37□□□□□ -0.27
TMC4-208ENST00000615945 CECR2Q9BXF3 1484 aa13.34□□□□□ -0.27
TMC4-208ENST00000615945 CC2D2AQ9P2K1 1620 aa13.33□□□□□ -0.28
TMC4-208ENST00000615945 EIF4G1Q04637 1599 aaKnown RBP13.09□□□□□ -0.31
TMC4-208ENST00000615945 SHROOM4Q9ULL8 1493 aa13□□□□□ -0.33
TMC4-208ENST00000615945 DCAF8L2P0C7V8 631 aa13□□□□□ -0.33
TMC4-208ENST00000615945 CUX2O14529 1486 aa12.99□□□□□ -0.33
TMC4-208ENST00000615945 MYO15BQ96JP2 1530 aa12.91□□□□□ -0.34
TMC4-208ENST00000615945 TRIM41Q8WV44 630 aa12.9□□□□□ -0.34
TMC4-208ENST00000615945 SCRIBQ14160 1630 aa12.74□□□□□ -0.37
TMC4-208ENST00000615945 ERCC6Q03468 1493 aa12.72□□□□□ -0.37
TMC4-208ENST00000615945 THOC2Q8NI27 1593 aaKnown RBP12.57□□□□□ -0.4
TMC4-208ENST00000615945 NESP48681 1621 aa12.49□□□□□ -0.41
TMC4-208ENST00000615945 DCAF1Q9Y4B6 1507 aa12.47□□□□□ -0.41
TMC4-208ENST00000615945 ZCCHC6Q5VYS8 1495 aaKnown RBP12.45□□□□□ -0.42
TMC4-208ENST00000615945 KIF21AQ7Z4S6 1674 aa12.38□□□□□ -0.43
TMC4-208ENST00000615945 SMARCA2P51531 1590 aa12.37□□□□□ -0.43
TMC4-208ENST00000615945 BAZ1AQ9NRL2 1556 aaPredicted RBP12.35□□□□□ -0.43
TMC4-208ENST00000615945 NCAPD3P42695 1498 aa12.34□□□□□ -0.43
TMC4-208ENST00000615945 RIMBP3CA6NJZ7 1639 aa12.29□□□□□ -0.44
TMC4-208ENST00000615945 RIMBP3BA6NNM3 1639 aa12.29□□□□□ -0.44
TMC4-208ENST00000615945 RIMBP3Q9UFD9 1639 aa12.29□□□□□ -0.44
TMC4-208ENST00000615945 AEBP2Q6ZN18 517 aaPredicted RBP12.24□□□□□ -0.45
TMC4-208ENST00000615945 HMGXB3Q12766 1538 aa12.22□□□□□ -0.45
TMC4-208ENST00000615945 ATAD2BQ9ULI0 1458 aa12.22□□□□□ -0.45
TMC4-208ENST00000615945 LAMC3Q9Y6N6 1575 aa12.22□□□□□ -0.45
TMC4-208ENST00000615945 OSCARQ8IYS5 282 aa12.16□□□□□ -0.46
TMC4-208ENST00000615945 WDR62O43379 1518 aa12.16□□□□□ -0.46
TMC4-208ENST00000615945 ARHGEF11O15085 1522 aa12.12□□□□□ -0.47
TMC4-208ENST00000615945 MRC2Q9UBG0 1479 aa12.1□□□□□ -0.47
TMC4-208ENST00000615945 PDS5BQ9NTI5 1447 aa12.08□□□□□ -0.48
TMC4-208ENST00000615945 SMARCA4P51532 1647 aa12.07□□□□□ -0.48
TMC4-208ENST00000615945 TRHP20396 242 aaPredicted RBP12.04□□□□□ -0.48
TMC4-208ENST00000615945 BAZ1BQ9UIG0 1483 aaKnown RBP12.03□□□□□ -0.48
TMC4-208ENST00000615945 ILDR1Q86SU0 546 aaPredicted RBP12□□□□□ -0.49
TMC4-208ENST00000615945 ARAP1Q96P48 1450 aa11.97□□□□□ -0.49
TMC4-208ENST00000615945 CYB5RLQ6IPT4 315 aa11.97□□□□□ -0.49
TMC4-208ENST00000615945 PEG3Q9GZU2 1588 aa11.94□□□□□ -0.5
TMC4-208ENST00000615945 CADPSQ9ULU8 1353 aa11.89□□□□□ -0.51
TMC4-208ENST00000615945 CEP164Q9UPV0 1460 aa11.89□□□□□ -0.51
TMC4-208ENST00000615945 CHD1O14646 1710 aa11.84□□□□□ -0.51
TMC4-208ENST00000615945 URB2Q14146 1524 aaKnown RBP11.82□□□□□ -0.52
TMC4-208ENST00000615945 FANCD2Q9BXW9 1451 aa11.81□□□□□ -0.52
TMC4-208ENST00000615945 ZNF608Q9ULD9 1512 aaPredicted RBP11.81□□□□□ -0.52
TMC4-208ENST00000615945 EIF4G3O43432 1585 aaKnown RBP11.73□□□□□ -0.53
TMC4-208ENST00000615945 MROH2BQ7Z745 1585 aa11.73□□□□□ -0.53
TMC4-208ENST00000615945 RSF1Q96T23 1441 aaPredicted RBP11.73□□□□□ -0.53
TMC4-208ENST00000615945 IFT140Q96RY7 1462 aa11.65□□□□□ -0.54
TMC4-208ENST00000615945 CFTRP13569 1480 aa11.63□□□□□ -0.55
TMC4-208ENST00000615945 CLASP1Q7Z460 1538 aa11.63□□□□□ -0.55
TMC4-208ENST00000615945 PRDM2Q13029 1718 aa11.61□□□□□ -0.55
TMC4-208ENST00000615945 KIF13AQ9H1H9 1805 aa11.6□□□□□ -0.55
TMC4-208ENST00000615945 WIZO95785 1651 aa11.59□□□□□ -0.55
TMC4-208ENST00000615945 KDM4FA0A1W2PPD8 638 aa11.56□□□□□ -0.56
TMC4-208ENST00000615945 AQRO60306 1485 aaKnown RBP eCLIP11.55□□□□□ -0.56
TMC4-208ENST00000615945 TARBP1Q13395 1621 aaKnown RBP11.54□□□□□ -0.56
TMC4-208ENST00000615945 TOPBP1Q92547 1522 aa11.52□□□□□ -0.57
TMC4-208ENST00000615945 FBLN2P98095 1184 aa11.51□□□□□ -0.57
TMC4-208ENST00000615945 GAPVD1Q14C86 1478 aa11.49□□□□□ -0.57
TMC4-208ENST00000615945 SYNJ1O43426 1573 aa11.47□□□□□ -0.57
TMC4-208ENST00000615945 ERCC6L2Q5T890 1561 aa11.45□□□□□ -0.58
TMC4-208ENST00000615945 HECW2Q9P2P5 1572 aa11.45□□□□□ -0.58
TMC4-208ENST00000615945 SNAPC4Q5SXM2 1469 aa11.42□□□□□ -0.58
TMC4-208ENST00000615945 DNMBPQ6XZF7 1577 aa11.41□□□□□ -0.58
TMC4-208ENST00000615945 KDM6BO15054 1643 aa11.36□□□□□ -0.59
TMC4-208ENST00000615945 POLA1P09884 1462 aaPredicted RBP11.36□□□□□ -0.59
TMC4-208ENST00000615945 LMTK3Q96Q04 1460 aa11.34□□□□□ -0.59
TMC4-208ENST00000615945 RAD54L2Q9Y4B4 1467 aa11.34□□□□□ -0.59
TMC4-208ENST00000615945 ABCC8Q09428 1581 aa11.33□□□□□ -0.6
TMC4-208ENST00000615945 FBXO41Q8TF61 875 aa11.33□□□□□ -0.6
TMC4-208ENST00000615945 TOP2AP11388 1531 aaKnown RBP11.33□□□□□ -0.6
TMC4-208ENST00000615945 MAGI1Q96QZ7 1491 aaPredicted RBP11.32□□□□□ -0.6
TMC4-208ENST00000615945 TDRD9Q8NDG6 1382 aaKnown RBP11.31□□□□□ -0.6
TMC4-208ENST00000615945 TSPOAP1O95153 1857 aa11.31□□□□□ -0.6
TMC4-208ENST00000615945 ADGRL1O94910 1474 aa11.31□□□□□ -0.6
TMC4-208ENST00000615945 SYNJ2O15056 1496 aa11.3□□□□□ -0.6
TMC4-208ENST00000615945 DIP2BQ9P265 1576 aa11.29□□□□□ -0.6
TMC4-208ENST00000615945 WDR97A6NE52 1622 aa11.28□□□□□ -0.6
TMC4-208ENST00000615945 PBRM1Q86U86 1689 aa11.28□□□□□ -0.6
TMC4-208ENST00000615945 CHMP7Q8WUX9 453 aaPredicted RBP11.28□□□□□ -0.6
TMC4-208ENST00000615945 CEP170Q5SW79 1584 aa11.27□□□□□ -0.61
TMC4-208ENST00000615945 ABCC10Q5T3U5 1492 aa11.26□□□□□ -0.61
TMC4-208ENST00000615945 ILDR2Q71H61 639 aa11.25□□□□□ -0.61
TMC4-208ENST00000615945 SHROOM2Q13796 1616 aa11.24□□□□□ -0.61
TMC4-208ENST00000615945 SOCS7O14512 581 aa11.23□□□□□ -0.61
TMC4-208ENST00000615945 GRIN2BQ13224 1484 aa11.22□□□□□ -0.61
TMC4-208ENST00000615945 SOGA1O94964 1423 aa11.21□□□□□ -0.61
TMC4-208ENST00000615945 FAM69CQ0P6D2 419 aa11.21□□□□□ -0.61
TMC4-208ENST00000615945 MAPKBP1O60336 1514 aa11.19□□□□□ -0.62
TMC4-208ENST00000615945 CCDC88BA6NC98 1476 aa11.19□□□□□ -0.62
TMC4-208ENST00000615945 FGD5Q6ZNL6 1462 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms