RNA–Protein interactions for RNA: ENST00000615046.4

HCG22-211, Transcript of HLA complex group 22 (gene/pseudogene), humanhuman

TSL 5

Gene HCG22, Length 1,603 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCG22-211ENST00000615046 NISCHQ9Y2I1 1504 aa22.21■■□□□ 1.15
HCG22-211ENST00000615046 CCDC180Q9P1Z9 1646 aa19.31■□□□□ 0.68
HCG22-211ENST00000615046 ZCCHC6Q5VYS8 1495 aaKnown RBP18.65■□□□□ 0.58
HCG22-211ENST00000615046 DCAF1Q9Y4B6 1507 aa18.39■□□□□ 0.54
HCG22-211ENST00000615046 DCAF8L2P0C7V8 631 aa18.37■□□□□ 0.53
HCG22-211ENST00000615046 ABCC9O60706 1549 aa18.3■□□□□ 0.52
HCG22-211ENST00000615046 MYO15BQ96JP2 1530 aa18.2■□□□□ 0.5
HCG22-211ENST00000615046 SHROOM4Q9ULL8 1493 aa18.09■□□□□ 0.49
HCG22-211ENST00000615046 NACADO15069 1562 aa18.05■□□□□ 0.48
HCG22-211ENST00000615046 RB1CC1Q8TDY2 1594 aa17.87■□□□□ 0.45
HCG22-211ENST00000615046 SCRIBQ14160 1630 aa17.74■□□□□ 0.43
HCG22-211ENST00000615046 SUPT5HO00267 1087 aaKnown RBP17.44■□□□□ 0.38
HCG22-211ENST00000615046 UNC13AQ9UPW8 1703 aa17.36■□□□□ 0.37
HCG22-211ENST00000615046 BICRAQ9NZM4 1560 aa17.3■□□□□ 0.36
HCG22-211ENST00000615046 PABPN1Q86U42 306 aaKnown RBP eCLIP17.29■□□□□ 0.36
HCG22-211ENST00000615046 RSF1Q96T23 1441 aaPredicted RBP17.25■□□□□ 0.35
HCG22-211ENST00000615046 CECR2Q9BXF3 1484 aa17.24■□□□□ 0.35
HCG22-211ENST00000615046 BAZ1AQ9NRL2 1556 aaPredicted RBP17.15■□□□□ 0.34
HCG22-211ENST00000615046 MROH2BQ7Z745 1585 aa17.13■□□□□ 0.33
HCG22-211ENST00000615046 SMARCA4P51532 1647 aa17.03■□□□□ 0.32
HCG22-211ENST00000615046 WIZO95785 1651 aa16.94■□□□□ 0.3
HCG22-211ENST00000615046 PEG3Q9GZU2 1588 aa16.86■□□□□ 0.29
HCG22-211ENST00000615046 TOP2AP11388 1531 aaKnown RBP16.83■□□□□ 0.28
HCG22-211ENST00000615046 ATAD2BQ9ULI0 1458 aa16.81■□□□□ 0.28
HCG22-211ENST00000615046 EIF4G1Q04637 1599 aaKnown RBP16.8■□□□□ 0.28
HCG22-211ENST00000615046 SMARCA2P51531 1590 aa16.79■□□□□ 0.28
HCG22-211ENST00000615046 CHIC1Q5VXU3 224 aa16.71■□□□□ 0.27
HCG22-211ENST00000615046 BAZ1BQ9UIG0 1483 aaKnown RBP16.7■□□□□ 0.26
HCG22-211ENST00000615046 NCAPD3P42695 1498 aa16.69■□□□□ 0.26
HCG22-211ENST00000615046 CCDC88BA6NC98 1476 aa16.67■□□□□ 0.26
HCG22-211ENST00000615046 HMGXB3Q12766 1538 aa16.62■□□□□ 0.25
HCG22-211ENST00000615046 CC2D2AQ9P2K1 1620 aa16.53■□□□□ 0.24
HCG22-211ENST00000615046 TRIM41Q8WV44 630 aa16.43■□□□□ 0.22
HCG22-211ENST00000615046 CFTRP13569 1480 aa16.31■□□□□ 0.2
HCG22-211ENST00000615046 CADPSQ9ULU8 1353 aa16.28■□□□□ 0.2
HCG22-211ENST00000615046 ABCC8Q09428 1581 aa16.25■□□□□ 0.19
HCG22-211ENST00000615046 WRNQ14191 1432 aaPredicted RBP eCLIP16.24■□□□□ 0.19
HCG22-211ENST00000615046 DNAJC5BQ9UF47 199 aa16.16■□□□□ 0.18
HCG22-211ENST00000615046 SYNJ1O43426 1573 aa16.1■□□□□ 0.17
HCG22-211ENST00000615046 FAM9AQ8IZU1 332 aaPredicted RBP16.08■□□□□ 0.17
HCG22-211ENST00000615046 LAMC3Q9Y6N6 1575 aa16.08■□□□□ 0.16
HCG22-211ENST00000615046 FANCD2Q9BXW9 1451 aa16.06■□□□□ 0.16
HCG22-211ENST00000615046 PRDM2Q13029 1718 aa16.06■□□□□ 0.16
HCG22-211ENST00000615046 TOP2BQ02880 1626 aa16.06■□□□□ 0.16
HCG22-211ENST00000615046 LOC105371045A0A1W2PR82 267 aa16.05■□□□□ 0.16
HCG22-211ENST00000615046 NESP48681 1621 aa16.04■□□□□ 0.16
HCG22-211ENST00000615046 EEA1Q15075 1411 aa16.04■□□□□ 0.16
HCG22-211ENST00000615046 CUX1P39880 1505 aa16.02■□□□□ 0.15
HCG22-211ENST00000615046 PDS5BQ9NTI5 1447 aa16.01■□□□□ 0.15
HCG22-211ENST00000615046 SOGA1O94964 1423 aa16.01■□□□□ 0.15
HCG22-211ENST00000615046 BIVM-ERCC5R4GMW8 1640 aa16.01■□□□□ 0.15
HCG22-211ENST00000615046 CSRNP3Q8WYN3 585 aa15.96■□□□□ 0.15
HCG22-211ENST00000615046 CEP164Q9UPV0 1460 aa15.95■□□□□ 0.14
HCG22-211ENST00000615046 RUSC2Q8N2Y8 1516 aa15.92■□□□□ 0.14
HCG22-211ENST00000615046 DNMBPQ6XZF7 1577 aa15.89■□□□□ 0.13
HCG22-211ENST00000615046 TOPBP1Q92547 1522 aa15.87■□□□□ 0.13
HCG22-211ENST00000615046 FGD5Q6ZNL6 1462 aa15.86■□□□□ 0.13
HCG22-211ENST00000615046 KIF27Q86VH2 1401 aa15.85■□□□□ 0.13
HCG22-211ENST00000615046 URB2Q14146 1524 aaKnown RBP15.83■□□□□ 0.12
HCG22-211ENST00000615046 EHMT2Q96KQ7 1210 aa15.82■□□□□ 0.12
HCG22-211ENST00000615046 POLA1P09884 1462 aaPredicted RBP15.79■□□□□ 0.12
HCG22-211ENST00000615046 CUX2O14529 1486 aa15.78■□□□□ 0.12
HCG22-211ENST00000615046 GOLGA3Q08378 1498 aa15.78■□□□□ 0.12
HCG22-211ENST00000615046 MRC2Q9UBG0 1479 aa15.77■□□□□ 0.11
HCG22-211ENST00000615046 KIF21AQ7Z4S6 1674 aa15.77■□□□□ 0.11
HCG22-211ENST00000615046 TNIKQ9UKE5 1360 aa15.76■□□□□ 0.11
HCG22-211ENST00000615046 ABCA10Q8WWZ4 1543 aa15.75■□□□□ 0.11
HCG22-211ENST00000615046 KIF21BO75037 1637 aa15.75■□□□□ 0.11
HCG22-211ENST00000615046 UBTFP17480 764 aaKnown RBP15.74■□□□□ 0.11
HCG22-211ENST00000615046 PRXQ9BXM0 1461 aa15.73■□□□□ 0.11
HCG22-211ENST00000615046 RAD54L2Q9Y4B4 1467 aa15.73■□□□□ 0.11
HCG22-211ENST00000615046 ERCC6Q03468 1493 aa15.72■□□□□ 0.11
HCG22-211ENST00000615046 IGF1RP08069 1367 aa15.72■□□□□ 0.11
HCG22-211ENST00000615046 RAPGEF2Q9Y4G8 1499 aa15.68■□□□□ 0.1
HCG22-211ENST00000615046 ERICH3Q5RHP9 1530 aa15.67■□□□□ 0.1
HCG22-211ENST00000615046 WDR62O43379 1518 aa15.67■□□□□ 0.1
HCG22-211ENST00000615046 CEP162Q5TB80 1403 aa15.63■□□□□ 0.09
HCG22-211ENST00000615046 CARMIL1Q5VZK9 1371 aa15.63■□□□□ 0.09
HCG22-211ENST00000615046 TDRD9Q8NDG6 1382 aaKnown RBP15.61■□□□□ 0.09
HCG22-211ENST00000615046 IFT140Q96RY7 1462 aa15.6■□□□□ 0.09
HCG22-211ENST00000615046 TARBP1Q13395 1621 aaKnown RBP15.59■□□□□ 0.09
HCG22-211ENST00000615046 GAPVD1Q14C86 1478 aa15.59■□□□□ 0.09
HCG22-211ENST00000615046 WDR97A6NE52 1622 aa15.58■□□□□ 0.08
HCG22-211ENST00000615046 THOC2Q8NI27 1593 aaKnown RBP15.56■□□□□ 0.08
HCG22-211ENST00000615046 ABCA5Q8WWZ7 1642 aa15.56■□□□□ 0.08
HCG22-211ENST00000615046 CLIP1P30622 1438 aa15.53■□□□□ 0.08
HCG22-211ENST00000615046 CUL7Q14999 1698 aa15.51■□□□□ 0.07
HCG22-211ENST00000615046 AQRO60306 1485 aaKnown RBP eCLIP15.5■□□□□ 0.07
HCG22-211ENST00000615046 GRIN2BQ13224 1484 aa15.48■□□□□ 0.07
HCG22-211ENST00000615046 ZNF608Q9ULD9 1512 aaPredicted RBP15.46■□□□□ 0.07
HCG22-211ENST00000615046 FHAD1B1AJZ9 1412 aa15.44■□□□□ 0.06
HCG22-211ENST00000615046 RANGAP1P46060 587 aaPredicted RBP15.43■□□□□ 0.06
HCG22-211ENST00000615046 VPS8Q8N3P4 1428 aa15.4■□□□□ 0.06
HCG22-211ENST00000615046 PBRM1Q86U86 1689 aa15.37■□□□□ 0.05
HCG22-211ENST00000615046 EIF4G3O43432 1585 aaKnown RBP15.36■□□□□ 0.05
HCG22-211ENST00000615046 ADAMTS12P58397 1594 aa15.36■□□□□ 0.05
HCG22-211ENST00000615046 ARHGAP35Q9NRY4 1499 aa15.36■□□□□ 0.05
HCG22-211ENST00000615046 TRIM26Q12899 539 aaPredicted RBP15.35■□□□□ 0.05
HCG22-211ENST00000615046 SNAPC4Q5SXM2 1469 aa15.34■□□□□ 0.05
HCG22-211ENST00000615046 ARAP1Q96P48 1450 aa15.34■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 65.8 ms