RNA–Protein interactions for RNA: ENST00000613854.1

HIST1H3A-201, Transcript of histone cluster 1 H3 family member a, humanhuman

APPRIS P1 BASIC

Gene HIST1H3A, Length 411 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H3A-201ENST00000613854 NISCHQ9Y2I1 1504 aa26.13■■□□□ 1.77
HIST1H3A-201ENST00000613854 CCDC180Q9P1Z9 1646 aa23.14■■□□□ 1.29
HIST1H3A-201ENST00000613854 ABCC9O60706 1549 aa22.66■■□□□ 1.22
HIST1H3A-201ENST00000613854 DCAF8L2P0C7V8 631 aa21.97■■□□□ 1.11
HIST1H3A-201ENST00000613854 ZCCHC6Q5VYS8 1495 aaKnown RBP21.77■■□□□ 1.07
HIST1H3A-201ENST00000613854 RB1CC1Q8TDY2 1594 aa21.76■■□□□ 1.07
HIST1H3A-201ENST00000613854 NACADO15069 1562 aa21.74■■□□□ 1.07
HIST1H3A-201ENST00000613854 MYO15BQ96JP2 1530 aa21.55■■□□□ 1.04
HIST1H3A-201ENST00000613854 DCAF1Q9Y4B6 1507 aa21.54■■□□□ 1.04
HIST1H3A-201ENST00000613854 UNC13AQ9UPW8 1703 aa21.32■■□□□ 1
HIST1H3A-201ENST00000613854 SCRIBQ14160 1630 aa21.25■□□□□ 0.99
HIST1H3A-201ENST00000613854 PABPN1Q86U42 306 aaKnown RBP eCLIP21.24■□□□□ 0.99
HIST1H3A-201ENST00000613854 BICRAQ9NZM4 1560 aa21.1■□□□□ 0.97
HIST1H3A-201ENST00000613854 SHROOM4Q9ULL8 1493 aa20.88■□□□□ 0.93
HIST1H3A-201ENST00000613854 DNAJC5BQ9UF47 199 aa20.7■□□□□ 0.9
HIST1H3A-201ENST00000613854 EIF4G1Q04637 1599 aaKnown RBP20.55■□□□□ 0.88
HIST1H3A-201ENST00000613854 CC2D2AQ9P2K1 1620 aa20.45■□□□□ 0.87
HIST1H3A-201ENST00000613854 CECR2Q9BXF3 1484 aa20.39■□□□□ 0.85
HIST1H3A-201ENST00000613854 SMARCA4P51532 1647 aa20.27■□□□□ 0.83
HIST1H3A-201ENST00000613854 BAZ1AQ9NRL2 1556 aaPredicted RBP20.23■□□□□ 0.83
HIST1H3A-201ENST00000613854 MROH2BQ7Z745 1585 aa20.18■□□□□ 0.82
HIST1H3A-201ENST00000613854 ATAD2BQ9ULI0 1458 aa20.11■□□□□ 0.81
HIST1H3A-201ENST00000613854 SMARCA2P51531 1590 aa20.08■□□□□ 0.8
HIST1H3A-201ENST00000613854 NCAPD3P42695 1498 aa20.05■□□□□ 0.8
HIST1H3A-201ENST00000613854 WIZO95785 1651 aa20■□□□□ 0.79
HIST1H3A-201ENST00000613854 PEG3Q9GZU2 1588 aa19.99■□□□□ 0.79
HIST1H3A-201ENST00000613854 BAZ1BQ9UIG0 1483 aaKnown RBP19.99■□□□□ 0.79
HIST1H3A-201ENST00000613854 RSF1Q96T23 1441 aaPredicted RBP19.97■□□□□ 0.79
HIST1H3A-201ENST00000613854 HMGXB3Q12766 1538 aa19.96■□□□□ 0.79
HIST1H3A-201ENST00000613854 TOP2AP11388 1531 aaKnown RBP19.72■□□□□ 0.75
HIST1H3A-201ENST00000613854 SUPT5HO00267 1087 aaKnown RBP19.69■□□□□ 0.74
HIST1H3A-201ENST00000613854 NESP48681 1621 aa19.65■□□□□ 0.74
HIST1H3A-201ENST00000613854 CCDC88BA6NC98 1476 aa19.53■□□□□ 0.72
HIST1H3A-201ENST00000613854 LAMC3Q9Y6N6 1575 aa19.52■□□□□ 0.71
HIST1H3A-201ENST00000613854 ERCC6Q03468 1493 aa19.51■□□□□ 0.71
HIST1H3A-201ENST00000613854 CADPSQ9ULU8 1353 aa19.5■□□□□ 0.71
HIST1H3A-201ENST00000613854 KIF21AQ7Z4S6 1674 aa19.4■□□□□ 0.7
HIST1H3A-201ENST00000613854 PDS5BQ9NTI5 1447 aa19.4■□□□□ 0.7
HIST1H3A-201ENST00000613854 CFTRP13569 1480 aa19.39■□□□□ 0.69
HIST1H3A-201ENST00000613854 FANCD2Q9BXW9 1451 aa19.31■□□□□ 0.68
HIST1H3A-201ENST00000613854 PRDM2Q13029 1718 aa19.28■□□□□ 0.68
HIST1H3A-201ENST00000613854 CEP164Q9UPV0 1460 aa19.27■□□□□ 0.67
HIST1H3A-201ENST00000613854 THOC2Q8NI27 1593 aaKnown RBP19.26■□□□□ 0.67
HIST1H3A-201ENST00000613854 MRC2Q9UBG0 1479 aa19.21■□□□□ 0.67
HIST1H3A-201ENST00000613854 CUX2O14529 1486 aa19.17■□□□□ 0.66
HIST1H3A-201ENST00000613854 WDR62O43379 1518 aa19.11■□□□□ 0.65
HIST1H3A-201ENST00000613854 URB2Q14146 1524 aaKnown RBP19.11■□□□□ 0.65
HIST1H3A-201ENST00000613854 TOPBP1Q92547 1522 aa19■□□□□ 0.63
HIST1H3A-201ENST00000613854 DNMBPQ6XZF7 1577 aa18.98■□□□□ 0.63
HIST1H3A-201ENST00000613854 ABCC8Q09428 1581 aa18.95■□□□□ 0.62
HIST1H3A-201ENST00000613854 CUX1P39880 1505 aa18.92■□□□□ 0.62
HIST1H3A-201ENST00000613854 POLA1P09884 1462 aaPredicted RBP18.85■□□□□ 0.61
HIST1H3A-201ENST00000613854 FGD5Q6ZNL6 1462 aa18.84■□□□□ 0.61
HIST1H3A-201ENST00000613854 IFT140Q96RY7 1462 aa18.84■□□□□ 0.61
HIST1H3A-201ENST00000613854 WRNQ14191 1432 aaPredicted RBP eCLIP18.83■□□□□ 0.61
HIST1H3A-201ENST00000613854 RAD54L2Q9Y4B4 1467 aa18.83■□□□□ 0.6
HIST1H3A-201ENST00000613854 SYNJ1O43426 1573 aa18.8■□□□□ 0.6
HIST1H3A-201ENST00000613854 ZNF608Q9ULD9 1512 aaPredicted RBP18.79■□□□□ 0.6
HIST1H3A-201ENST00000613854 SOGA1O94964 1423 aa18.79■□□□□ 0.6
HIST1H3A-201ENST00000613854 TARBP1Q13395 1621 aaKnown RBP18.78■□□□□ 0.6
HIST1H3A-201ENST00000613854 TOP2BQ02880 1626 aa18.75■□□□□ 0.59
HIST1H3A-201ENST00000613854 BIVM-ERCC5R4GMW8 1640 aa18.75■□□□□ 0.59
HIST1H3A-201ENST00000613854 AQRO60306 1485 aaKnown RBP eCLIP18.71■□□□□ 0.59
HIST1H3A-201ENST00000613854 TDRD9Q8NDG6 1382 aaKnown RBP18.71■□□□□ 0.59
HIST1H3A-201ENST00000613854 EIF4G3O43432 1585 aaKnown RBP18.71■□□□□ 0.59
HIST1H3A-201ENST00000613854 WDR97A6NE52 1622 aa18.65■□□□□ 0.58
HIST1H3A-201ENST00000613854 ABCA10Q8WWZ4 1543 aa18.61■□□□□ 0.57
HIST1H3A-201ENST00000613854 GAPVD1Q14C86 1478 aa18.57■□□□□ 0.56
HIST1H3A-201ENST00000613854 PBRM1Q86U86 1689 aa18.54■□□□□ 0.56
HIST1H3A-201ENST00000613854 ABCA5Q8WWZ7 1642 aa18.54■□□□□ 0.56
HIST1H3A-201ENST00000613854 FBLN2P98095 1184 aa18.54■□□□□ 0.56
HIST1H3A-201ENST00000613854 GRIN2BQ13224 1484 aa18.53■□□□□ 0.56
HIST1H3A-201ENST00000613854 SNAPC4Q5SXM2 1469 aa18.53■□□□□ 0.56
HIST1H3A-201ENST00000613854 TRIM41Q8WV44 630 aa18.53■□□□□ 0.56
HIST1H3A-201ENST00000613854 DNAJC5Q9H3Z4 198 aa18.5■□□□□ 0.55
HIST1H3A-201ENST00000613854 CHD1O14646 1710 aa18.49■□□□□ 0.55
HIST1H3A-201ENST00000613854 OSCARQ8IYS5 282 aa18.46■□□□□ 0.55
HIST1H3A-201ENST00000613854 CHMP7Q8WUX9 453 aaPredicted RBP18.45■□□□□ 0.54
HIST1H3A-201ENST00000613854 MAGI1Q96QZ7 1491 aaPredicted RBP18.45■□□□□ 0.54
HIST1H3A-201ENST00000613854 KIF27Q86VH2 1401 aa18.42■□□□□ 0.54
HIST1H3A-201ENST00000613854 SYNJ2O15056 1496 aa18.39■□□□□ 0.53
HIST1H3A-201ENST00000613854 ERICH3Q5RHP9 1530 aa18.39■□□□□ 0.53
HIST1H3A-201ENST00000613854 CHIC1Q5VXU3 224 aa18.37■□□□□ 0.53
HIST1H3A-201ENST00000613854 ADAMTS12P58397 1594 aa18.37■□□□□ 0.53
HIST1H3A-201ENST00000613854 RUSC2Q8N2Y8 1516 aa18.36■□□□□ 0.53
HIST1H3A-201ENST00000613854 FHAD1B1AJZ9 1412 aa18.34■□□□□ 0.53
HIST1H3A-201ENST00000613854 IGF1RP08069 1367 aa18.33■□□□□ 0.53
HIST1H3A-201ENST00000613854 GRIN2AQ12879 1464 aa18.3■□□□□ 0.52
HIST1H3A-201ENST00000613854 CUL7Q14999 1698 aa18.26■□□□□ 0.51
HIST1H3A-201ENST00000613854 CARMIL1Q5VZK9 1371 aa18.25■□□□□ 0.51
HIST1H3A-201ENST00000613854 FAM9AQ8IZU1 332 aaPredicted RBP18.24■□□□□ 0.51
HIST1H3A-201ENST00000613854 CEP170Q5SW79 1584 aa18.22■□□□□ 0.51
HIST1H3A-201ENST00000613854 CLASP1Q7Z460 1538 aa18.22■□□□□ 0.51
HIST1H3A-201ENST00000613854 NUP160Q12769 1436 aa18.19■□□□□ 0.5
HIST1H3A-201ENST00000613854 RIMBP3CA6NJZ7 1639 aa18.16■□□□□ 0.5
HIST1H3A-201ENST00000613854 RIMBP3BA6NNM3 1639 aa18.16■□□□□ 0.5
HIST1H3A-201ENST00000613854 RIMBP3Q9UFD9 1639 aa18.16■□□□□ 0.5
HIST1H3A-201ENST00000613854 ARHGEF11O15085 1522 aa18.15■□□□□ 0.5
HIST1H3A-201ENST00000613854 CSRNP3Q8WYN3 585 aa18.14■□□□□ 0.49
HIST1H3A-201ENST00000613854 RAPGEF2Q9Y4G8 1499 aa18.14■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 7 ms