RNA–Protein interactions for RNA: ENST00000613633.1

DDX52-210, Transcript of DExD-box helicase 52, humanhuman

TSL 3

Gene DDX52, Length 776 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX52-210ENST00000613633 NISCHQ9Y2I1 1504 aa19.46■□□□□ 0.71
DDX52-210ENST00000613633 AEBP2Q6ZN18 517 aaPredicted RBP18.93■□□□□ 0.62
DDX52-210ENST00000613633 CHIC1Q5VXU3 224 aa17.86■□□□□ 0.45
DDX52-210ENST00000613633 CCDC180Q9P1Z9 1646 aa16.88■□□□□ 0.29
DDX52-210ENST00000613633 ZCCHC6Q5VYS8 1495 aaKnown RBP16.46■□□□□ 0.23
DDX52-210ENST00000613633 SENP3Q9H4L4 574 aaPredicted RBP16.21■□□□□ 0.19
DDX52-210ENST00000613633 DCAF1Q9Y4B6 1507 aa16.14■□□□□ 0.18
DDX52-210ENST00000613633 SHROOM4Q9ULL8 1493 aa16.03■□□□□ 0.16
DDX52-210ENST00000613633 PHF23Q9BUL5 403 aaPredicted RBP15.96■□□□□ 0.15
DDX52-210ENST00000613633 MYO15BQ96JP2 1530 aa15.8■□□□□ 0.12
DDX52-210ENST00000613633 DCAF8L2P0C7V8 631 aa15.72■□□□□ 0.11
DDX52-210ENST00000613633 SUPT5HO00267 1087 aaKnown RBP15.59■□□□□ 0.09
DDX52-210ENST00000613633 NACADO15069 1562 aa15.56■□□□□ 0.08
DDX52-210ENST00000613633 ABCC9O60706 1549 aa15.52■□□□□ 0.07
DDX52-210ENST00000613633 SCRIBQ14160 1630 aa15.49■□□□□ 0.07
DDX52-210ENST00000613633 RB1CC1Q8TDY2 1594 aa15.32■□□□□ 0.04
DDX52-210ENST00000613633 RSF1Q96T23 1441 aaPredicted RBP15.22■□□□□ 0.03
DDX52-210ENST00000613633 UNC13AQ9UPW8 1703 aa15.16■□□□□ 0.02
DDX52-210ENST00000613633 FOXD1Q16676 465 aa15.1■□□□□ 0.01
DDX52-210ENST00000613633 CECR2Q9BXF3 1484 aa15.06■□□□□ 0
DDX52-210ENST00000613633 MROH2BQ7Z745 1585 aa15.04■□□□□ -0
DDX52-210ENST00000613633 BAZ1AQ9NRL2 1556 aaPredicted RBP15□□□□□ -0.01
DDX52-210ENST00000613633 WIZO95785 1651 aa14.98□□□□□ -0.01
DDX52-210ENST00000613633 SMARCA4P51532 1647 aa14.92□□□□□ -0.02
DDX52-210ENST00000613633 BICRAQ9NZM4 1560 aa14.88□□□□□ -0.03
DDX52-210ENST00000613633 POTEDQ86YR6 584 aa14.87□□□□□ -0.03
DDX52-210ENST00000613633 TOP2AP11388 1531 aaKnown RBP14.83□□□□□ -0.04
DDX52-210ENST00000613633 EIF4G1Q04637 1599 aaKnown RBP14.83□□□□□ -0.04
DDX52-210ENST00000613633 PEG3Q9GZU2 1588 aa14.73□□□□□ -0.05
DDX52-210ENST00000613633 SMARCA2P51531 1590 aa14.71□□□□□ -0.05
DDX52-210ENST00000613633 TRIM41Q8WV44 630 aa14.65□□□□□ -0.06
DDX52-210ENST00000613633 CCDC88BA6NC98 1476 aa14.63□□□□□ -0.07
DDX52-210ENST00000613633 LOC105371045A0A1W2PR82 267 aa14.59□□□□□ -0.07
DDX52-210ENST00000613633 PABPN1Q86U42 306 aaKnown RBP eCLIP14.56□□□□□ -0.08
DDX52-210ENST00000613633 ATAD2BQ9ULI0 1458 aa14.5□□□□□ -0.09
DDX52-210ENST00000613633 ABCC8Q09428 1581 aa14.47□□□□□ -0.09
DDX52-210ENST00000613633 BAZ1BQ9UIG0 1483 aaKnown RBP14.44□□□□□ -0.1
DDX52-210ENST00000613633 HMGXB3Q12766 1538 aa14.39□□□□□ -0.11
DDX52-210ENST00000613633 FAM9AQ8IZU1 332 aaPredicted RBP14.35□□□□□ -0.11
DDX52-210ENST00000613633 PCGF6Q9BYE7 350 aa14.35□□□□□ -0.11
DDX52-210ENST00000613633 EEA1Q15075 1411 aa14.34□□□□□ -0.11
DDX52-210ENST00000613633 HRCP23327 699 aa14.34□□□□□ -0.11
DDX52-210ENST00000613633 NCAPD3P42695 1498 aa14.31□□□□□ -0.12
DDX52-210ENST00000613633 MSH5O43196 834 aa14.3□□□□□ -0.12
DDX52-210ENST00000613633 WRNQ14191 1432 aaPredicted RBP eCLIP14.3□□□□□ -0.12
DDX52-210ENST00000613633 SYNJ1O43426 1573 aa14.3□□□□□ -0.12
DDX52-210ENST00000613633 TRIM26Q12899 539 aaPredicted RBP14.29□□□□□ -0.12
DDX52-210ENST00000613633 PRDM2Q13029 1718 aa14.25□□□□□ -0.13
DDX52-210ENST00000613633 SOGA1O94964 1423 aa14.24□□□□□ -0.13
DDX52-210ENST00000613633 BIVM-ERCC5R4GMW8 1640 aa14.24□□□□□ -0.13
DDX52-210ENST00000613633 TOP2BQ02880 1626 aa14.22□□□□□ -0.13
DDX52-210ENST00000613633 PLPPR3Q6T4P5 718 aa14.21□□□□□ -0.13
DDX52-210ENST00000613633 KIF21BO75037 1637 aa14.2□□□□□ -0.14
DDX52-210ENST00000613633 RUSC2Q8N2Y8 1516 aa14.18□□□□□ -0.14
DDX52-210ENST00000613633 TNIKQ9UKE5 1360 aa14.18□□□□□ -0.14
DDX52-210ENST00000613633 GOLGA3Q08378 1498 aa14.16□□□□□ -0.14
DDX52-210ENST00000613633 CSRNP3Q8WYN3 585 aa14.14□□□□□ -0.15
DDX52-210ENST00000613633 CEP162Q5TB80 1403 aa14.12□□□□□ -0.15
DDX52-210ENST00000613633 CFTRP13569 1480 aa14.12□□□□□ -0.15
DDX52-210ENST00000613633 CEP164Q9UPV0 1460 aa14.11□□□□□ -0.15
DDX52-210ENST00000613633 PIAS4Q8N2W9 510 aaPredicted RBP14.1□□□□□ -0.15
DDX52-210ENST00000613633 EHMT2Q96KQ7 1210 aa14.09□□□□□ -0.15
DDX52-210ENST00000613633 CUX1P39880 1505 aa14.05□□□□□ -0.16
DDX52-210ENST00000613633 CC2D2AQ9P2K1 1620 aa14.05□□□□□ -0.16
DDX52-210ENST00000613633 ERICH3Q5RHP9 1530 aa14.01□□□□□ -0.17
DDX52-210ENST00000613633 PPP6R1Q9UPN7 881 aa13.98□□□□□ -0.17
DDX52-210ENST00000613633 PRXQ9BXM0 1461 aa13.95□□□□□ -0.18
DDX52-210ENST00000613633 RAPGEF2Q9Y4G8 1499 aa13.95□□□□□ -0.18
DDX52-210ENST00000613633 ZEB1P37275 1124 aaPredicted RBP13.95□□□□□ -0.18
DDX52-210ENST00000613633 UBTFP17480 764 aaKnown RBP13.94□□□□□ -0.18
DDX52-210ENST00000613633 ADRA2BP18089 450 aa13.94□□□□□ -0.18
DDX52-210ENST00000613633 CADPSQ9ULU8 1353 aa13.94□□□□□ -0.18
DDX52-210ENST00000613633 CLIP1P30622 1438 aa13.91□□□□□ -0.18
DDX52-210ENST00000613633 KIF27Q86VH2 1401 aa13.9□□□□□ -0.19
DDX52-210ENST00000613633 PPARGC1BQ86YN6 1023 aaKnown RBP13.89□□□□□ -0.19
DDX52-210ENST00000613633 VPS8Q8N3P4 1428 aa13.87□□□□□ -0.19
DDX52-210ENST00000613633 DNMBPQ6XZF7 1577 aa13.82□□□□□ -0.2
DDX52-210ENST00000613633 FGD5Q6ZNL6 1462 aa13.8□□□□□ -0.2
DDX52-210ENST00000613633 FANCD2Q9BXW9 1451 aa13.8□□□□□ -0.2
DDX52-210ENST00000613633 LAMC3Q9Y6N6 1575 aa13.8□□□□□ -0.2
DDX52-210ENST00000613633 CUX2O14529 1486 aa13.77□□□□□ -0.21
DDX52-210ENST00000613633 ARAP1Q96P48 1450 aa13.77□□□□□ -0.21
DDX52-210ENST00000613633 WDR97A6NE52 1622 aa13.75□□□□□ -0.21
DDX52-210ENST00000613633 TOPBP1Q92547 1522 aa13.74□□□□□ -0.21
DDX52-210ENST00000613633 IGF1RP08069 1367 aa13.72□□□□□ -0.21
DDX52-210ENST00000613633 ABCA10Q8WWZ4 1543 aa13.72□□□□□ -0.21
DDX52-210ENST00000613633 NESP48681 1621 aa13.7□□□□□ -0.22
DDX52-210ENST00000613633 CUL7Q14999 1698 aa13.69□□□□□ -0.22
DDX52-210ENST00000613633 POLA1P09884 1462 aaPredicted RBP13.68□□□□□ -0.22
DDX52-210ENST00000613633 ARHGAP35Q9NRY4 1499 aa13.68□□□□□ -0.22
DDX52-210ENST00000613633 CARMIL1Q5VZK9 1371 aa13.65□□□□□ -0.22
DDX52-210ENST00000613633 KIF21AQ7Z4S6 1674 aa13.65□□□□□ -0.22
DDX52-210ENST00000613633 CTTNBP2Q8WZ74 1663 aa13.65□□□□□ -0.22
DDX52-210ENST00000613633 URB2Q14146 1524 aaKnown RBP13.64□□□□□ -0.23
DDX52-210ENST00000613633 ABCA5Q8WWZ7 1642 aa13.63□□□□□ -0.23
DDX52-210ENST00000613633 TTBK1Q5TCY1 1321 aaPredicted RBP13.63□□□□□ -0.23
DDX52-210ENST00000613633 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.62□□□□□ -0.23
DDX52-210ENST00000613633 APLP2Q06481 763 aa13.62□□□□□ -0.23
DDX52-210ENST00000613633 CCER1Q8TC90 406 aaPredicted RBP13.62□□□□□ -0.23
DDX52-210ENST00000613633 MAP3K1Q13233 1512 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms