RNA–Protein interactions for RNA: ENST00000613104.1

ATF3-210, Transcript of activating transcription factor 3, humanhuman

TSL 1 (best) BASIC

Gene ATF3, Length 581 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATF3-210ENST00000613104 NISCHQ9Y2I1 1504 aa22.16■■□□□ 1.14
ATF3-210ENST00000613104 AEBP2Q6ZN18 517 aaPredicted RBP20.82■□□□□ 0.92
ATF3-210ENST00000613104 CHIC1Q5VXU3 224 aa20.75■□□□□ 0.91
ATF3-210ENST00000613104 CCDC180Q9P1Z9 1646 aa19.59■□□□□ 0.73
ATF3-210ENST00000613104 ABCC9O60706 1549 aa18.83■□□□□ 0.6
ATF3-210ENST00000613104 ZCCHC6Q5VYS8 1495 aaKnown RBP18.52■□□□□ 0.56
ATF3-210ENST00000613104 DCAF1Q9Y4B6 1507 aa18.37■□□□□ 0.53
ATF3-210ENST00000613104 MYO15BQ96JP2 1530 aa18.35■□□□□ 0.53
ATF3-210ENST00000613104 NACADO15069 1562 aa18.34■□□□□ 0.53
ATF3-210ENST00000613104 DCAF8L2P0C7V8 631 aa18.29■□□□□ 0.52
ATF3-210ENST00000613104 RB1CC1Q8TDY2 1594 aa18.27■□□□□ 0.52
ATF3-210ENST00000613104 PHF23Q9BUL5 403 aaPredicted RBP18.22■□□□□ 0.51
ATF3-210ENST00000613104 UNC13AQ9UPW8 1703 aa17.9■□□□□ 0.46
ATF3-210ENST00000613104 SCRIBQ14160 1630 aa17.85■□□□□ 0.45
ATF3-210ENST00000613104 SENP3Q9H4L4 574 aaPredicted RBP17.74■□□□□ 0.43
ATF3-210ENST00000613104 BICRAQ9NZM4 1560 aa17.73■□□□□ 0.43
ATF3-210ENST00000613104 PABPN1Q86U42 306 aaKnown RBP eCLIP17.63■□□□□ 0.41
ATF3-210ENST00000613104 SHROOM4Q9ULL8 1493 aa17.61■□□□□ 0.41
ATF3-210ENST00000613104 DNAJC5BQ9UF47 199 aa17.32■□□□□ 0.36
ATF3-210ENST00000613104 CECR2Q9BXF3 1484 aa17.22■□□□□ 0.35
ATF3-210ENST00000613104 EIF4G1Q04637 1599 aaKnown RBP17.22■□□□□ 0.35
ATF3-210ENST00000613104 BAZ1AQ9NRL2 1556 aaPredicted RBP17.15■□□□□ 0.34
ATF3-210ENST00000613104 SMARCA4P51532 1647 aa17.13■□□□□ 0.33
ATF3-210ENST00000613104 CC2D2AQ9P2K1 1620 aa17.07■□□□□ 0.32
ATF3-210ENST00000613104 MROH2BQ7Z745 1585 aa17.07■□□□□ 0.32
ATF3-210ENST00000613104 PLPPR3Q6T4P5 718 aa17.07■□□□□ 0.32
ATF3-210ENST00000613104 PEG3Q9GZU2 1588 aa16.98■□□□□ 0.31
ATF3-210ENST00000613104 RSF1Q96T23 1441 aaPredicted RBP16.98■□□□□ 0.31
ATF3-210ENST00000613104 ATAD2BQ9ULI0 1458 aa16.96■□□□□ 0.31
ATF3-210ENST00000613104 SMARCA2P51531 1590 aa16.94■□□□□ 0.3
ATF3-210ENST00000613104 NCAPD3P42695 1498 aa16.92■□□□□ 0.3
ATF3-210ENST00000613104 WIZO95785 1651 aa16.91■□□□□ 0.3
ATF3-210ENST00000613104 HMGXB3Q12766 1538 aa16.86■□□□□ 0.29
ATF3-210ENST00000613104 BAZ1BQ9UIG0 1483 aaKnown RBP16.81■□□□□ 0.28
ATF3-210ENST00000613104 TOP2AP11388 1531 aaKnown RBP16.75■□□□□ 0.27
ATF3-210ENST00000613104 SUPT5HO00267 1087 aaKnown RBP16.7■□□□□ 0.26
ATF3-210ENST00000613104 CCDC88BA6NC98 1476 aa16.54■□□□□ 0.24
ATF3-210ENST00000613104 DNAJC5Q9H3Z4 198 aa16.44■□□□□ 0.22
ATF3-210ENST00000613104 CADPSQ9ULU8 1353 aa16.42■□□□□ 0.22
ATF3-210ENST00000613104 LAMC3Q9Y6N6 1575 aa16.42■□□□□ 0.22
ATF3-210ENST00000613104 CFTRP13569 1480 aa16.4■□□□□ 0.22
ATF3-210ENST00000613104 NESP48681 1621 aa16.39■□□□□ 0.21
ATF3-210ENST00000613104 FOXD1Q16676 465 aa16.34■□□□□ 0.21
ATF3-210ENST00000613104 PRDM2Q13029 1718 aa16.33■□□□□ 0.2
ATF3-210ENST00000613104 PDS5BQ9NTI5 1447 aa16.28■□□□□ 0.2
ATF3-210ENST00000613104 KIF21AQ7Z4S6 1674 aa16.23■□□□□ 0.19
ATF3-210ENST00000613104 FANCD2Q9BXW9 1451 aa16.22■□□□□ 0.19
ATF3-210ENST00000613104 ERCC6Q03468 1493 aa16.19■□□□□ 0.18
ATF3-210ENST00000613104 CEP164Q9UPV0 1460 aa16.17■□□□□ 0.18
ATF3-210ENST00000613104 THOC2Q8NI27 1593 aaKnown RBP16.11■□□□□ 0.17
ATF3-210ENST00000613104 MRC2Q9UBG0 1479 aa16.1■□□□□ 0.17
ATF3-210ENST00000613104 URB2Q14146 1524 aaKnown RBP16.06■□□□□ 0.16
ATF3-210ENST00000613104 WDR62O43379 1518 aa16.05■□□□□ 0.16
ATF3-210ENST00000613104 ABCC8Q09428 1581 aa16.03■□□□□ 0.16
ATF3-210ENST00000613104 DNMBPQ6XZF7 1577 aa16.02■□□□□ 0.16
ATF3-210ENST00000613104 ADRA2BP18089 450 aa16.02■□□□□ 0.16
ATF3-210ENST00000613104 TOPBP1Q92547 1522 aa16.01■□□□□ 0.15
ATF3-210ENST00000613104 CUX1P39880 1505 aa15.99■□□□□ 0.15
ATF3-210ENST00000613104 WRNQ14191 1432 aaPredicted RBP eCLIP15.99■□□□□ 0.15
ATF3-210ENST00000613104 PPP6R1Q9UPN7 881 aa15.97■□□□□ 0.15
ATF3-210ENST00000613104 CUX2O14529 1486 aa15.97■□□□□ 0.15
ATF3-210ENST00000613104 BIVM-ERCC5R4GMW8 1640 aa15.95■□□□□ 0.14
ATF3-210ENST00000613104 SYNJ1O43426 1573 aa15.95■□□□□ 0.14
ATF3-210ENST00000613104 TOP2BQ02880 1626 aa15.94■□□□□ 0.14
ATF3-210ENST00000613104 POLA1P09884 1462 aaPredicted RBP15.89■□□□□ 0.13
ATF3-210ENST00000613104 FGD5Q6ZNL6 1462 aa15.89■□□□□ 0.13
ATF3-210ENST00000613104 IFT140Q96RY7 1462 aa15.84■□□□□ 0.13
ATF3-210ENST00000613104 TARBP1Q13395 1621 aaKnown RBP15.83■□□□□ 0.12
ATF3-210ENST00000613104 SOGA1O94964 1423 aa15.82■□□□□ 0.12
ATF3-210ENST00000613104 RAD54L2Q9Y4B4 1467 aa15.81■□□□□ 0.12
ATF3-210ENST00000613104 WDR97A6NE52 1622 aa15.79■□□□□ 0.12
ATF3-210ENST00000613104 TRIM41Q8WV44 630 aa15.77■□□□□ 0.12
ATF3-210ENST00000613104 ABCA10Q8WWZ4 1543 aa15.77■□□□□ 0.11
ATF3-210ENST00000613104 ZNF608Q9ULD9 1512 aaPredicted RBP15.73■□□□□ 0.11
ATF3-210ENST00000613104 EIF4G3O43432 1585 aaKnown RBP15.69■□□□□ 0.1
ATF3-210ENST00000613104 ABCA5Q8WWZ7 1642 aa15.68■□□□□ 0.1
ATF3-210ENST00000613104 TDRD9Q8NDG6 1382 aaKnown RBP15.68■□□□□ 0.1
ATF3-210ENST00000613104 AQRO60306 1485 aaKnown RBP eCLIP15.66■□□□□ 0.18e-7■□□□□ 9.1
ATF3-210ENST00000613104 GAPVD1Q14C86 1478 aa15.65■□□□□ 0.1
ATF3-210ENST00000613104 KIF27Q86VH2 1401 aa15.63■□□□□ 0.09
ATF3-210ENST00000613104 PBRM1Q86U86 1689 aa15.62■□□□□ 0.09
ATF3-210ENST00000613104 GRIN2BQ13224 1484 aa15.6■□□□□ 0.09
ATF3-210ENST00000613104 RUSC2Q8N2Y8 1516 aa15.58■□□□□ 0.09
ATF3-210ENST00000613104 ERICH3Q5RHP9 1530 aa15.58■□□□□ 0.08
ATF3-210ENST00000613104 PIAS4Q8N2W9 510 aaPredicted RBP15.57■□□□□ 0.08
ATF3-210ENST00000613104 SNAPC4Q5SXM2 1469 aa15.54■□□□□ 0.08
ATF3-210ENST00000613104 MAGI1Q96QZ7 1491 aaPredicted RBP15.54■□□□□ 0.08
ATF3-210ENST00000613104 EEA1Q15075 1411 aa15.54■□□□□ 0.08
ATF3-210ENST00000613104 IGF1RP08069 1367 aa15.54■□□□□ 0.08
ATF3-210ENST00000613104 ADAMTS12P58397 1594 aa15.51■□□□□ 0.07
ATF3-210ENST00000613104 CUL7Q14999 1698 aa15.5■□□□□ 0.07
ATF3-210ENST00000613104 FHAD1B1AJZ9 1412 aa15.48■□□□□ 0.07
ATF3-210ENST00000613104 SYNJ2O15056 1496 aa15.47■□□□□ 0.07
ATF3-210ENST00000613104 CSRNP3Q8WYN3 585 aa15.46■□□□□ 0.07
ATF3-210ENST00000613104 CARMIL1Q5VZK9 1371 aa15.45■□□□□ 0.06
ATF3-210ENST00000613104 CHD1O14646 1710 aa15.45■□□□□ 0.06
ATF3-210ENST00000613104 PRXQ9BXM0 1461 aa15.43■□□□□ 0.06
ATF3-210ENST00000613104 FAM9AQ8IZU1 332 aaPredicted RBP15.42■□□□□ 0.06
ATF3-210ENST00000613104 GRIN2AQ12879 1464 aa15.41■□□□□ 0.06
ATF3-210ENST00000613104 CHMP7Q8WUX9 453 aaPredicted RBP15.41■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms