RNA–Protein interactions for RNA: ENST00000612959.4

NSRP1-217, Transcript of nuclear speckle splicing regulatory protein 1, humanhuman

TSL 1 (best) BASIC

Gene NSRP1, Length 2,420 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSRP1-217ENST00000612959 NISCHQ9Y2I1 1504 aa18.14■□□□□ 0.49
NSRP1-217ENST00000612959 AEBP2Q6ZN18 517 aaPredicted RBP17.18■□□□□ 0.34
NSRP1-217ENST00000612959 CHIC1Q5VXU3 224 aa16.43■□□□□ 0.22
NSRP1-217ENST00000612959 CCDC180Q9P1Z9 1646 aa15.94■□□□□ 0.14
NSRP1-217ENST00000612959 ABCC9O60706 1549 aa15.63■□□□□ 0.09
NSRP1-217ENST00000612959 DCAF8L2P0C7V8 631 aa15.32■□□□□ 0.04
NSRP1-217ENST00000612959 ZCCHC6Q5VYS8 1495 aaKnown RBP15.14■□□□□ 0.01
NSRP1-217ENST00000612959 NACADO15069 1562 aa14.99□□□□□ -0.01
NSRP1-217ENST00000612959 RB1CC1Q8TDY2 1594 aa14.99□□□□□ -0.01
NSRP1-217ENST00000612959 DCAF1Q9Y4B6 1507 aa14.92□□□□□ -0.02
NSRP1-217ENST00000612959 MYO15BQ96JP2 1530 aa14.88□□□□□ -0.03
NSRP1-217ENST00000612959 SENP3Q9H4L4 574 aaPredicted RBP14.77□□□□□ -0.04
NSRP1-217ENST00000612959 SCRIBQ14160 1630 aa14.73□□□□□ -0.05
NSRP1-217ENST00000612959 PABPN1Q86U42 306 aaKnown RBP eCLIP14.71□□□□□ -0.05
NSRP1-217ENST00000612959 SHROOM4Q9ULL8 1493 aa14.67□□□□□ -0.06
NSRP1-217ENST00000612959 UNC13AQ9UPW8 1703 aa14.62□□□□□ -0.07
NSRP1-217ENST00000612959 PHF23Q9BUL5 403 aaPredicted RBP14.54□□□□□ -0.08
NSRP1-217ENST00000612959 BICRAQ9NZM4 1560 aa14.54□□□□□ -0.08
NSRP1-217ENST00000612959 DNAJC5BQ9UF47 199 aa14.2□□□□□ -0.14
NSRP1-217ENST00000612959 CECR2Q9BXF3 1484 aa14.18□□□□□ -0.14
NSRP1-217ENST00000612959 EIF4G1Q04637 1599 aaKnown RBP14.16□□□□□ -0.14
NSRP1-217ENST00000612959 CC2D2AQ9P2K1 1620 aa14.07□□□□□ -0.16
NSRP1-217ENST00000612959 MROH2BQ7Z745 1585 aa14.03□□□□□ -0.16
NSRP1-217ENST00000612959 BAZ1AQ9NRL2 1556 aaPredicted RBP14.03□□□□□ -0.16
NSRP1-217ENST00000612959 SMARCA4P51532 1647 aa14.03□□□□□ -0.16
NSRP1-217ENST00000612959 RSF1Q96T23 1441 aaPredicted RBP13.93□□□□□ -0.18
NSRP1-217ENST00000612959 ATAD2BQ9ULI0 1458 aa13.93□□□□□ -0.18
NSRP1-217ENST00000612959 SUPT5HO00267 1087 aaKnown RBP13.89□□□□□ -0.19
NSRP1-217ENST00000612959 WIZO95785 1651 aa13.88□□□□□ -0.19
NSRP1-217ENST00000612959 SMARCA2P51531 1590 aa13.88□□□□□ -0.19
NSRP1-217ENST00000612959 NCAPD3P42695 1498 aa13.85□□□□□ -0.19
NSRP1-217ENST00000612959 BAZ1BQ9UIG0 1483 aaKnown RBP13.85□□□□□ -0.19
NSRP1-217ENST00000612959 PEG3Q9GZU2 1588 aa13.81□□□□□ -0.2
NSRP1-217ENST00000612959 HMGXB3Q12766 1538 aa13.78□□□□□ -0.2
NSRP1-217ENST00000612959 TOP2AP11388 1531 aaKnown RBP13.7□□□□□ -0.22
NSRP1-217ENST00000612959 FOXD1Q16676 465 aa13.69□□□□□ -0.22
NSRP1-217ENST00000612959 CCDC88BA6NC98 1476 aa13.59□□□□□ -0.23
NSRP1-217ENST00000612959 NESP48681 1621 aa13.57□□□□□ -0.24
NSRP1-217ENST00000612959 CADPSQ9ULU8 1353 aa13.5□□□□□ -0.25
NSRP1-217ENST00000612959 ERCC6Q03468 1493 aa13.45□□□□□ -0.26
NSRP1-217ENST00000612959 CFTRP13569 1480 aa13.44□□□□□ -0.26
NSRP1-217ENST00000612959 LAMC3Q9Y6N6 1575 aa13.44□□□□□ -0.26
NSRP1-217ENST00000612959 PDS5BQ9NTI5 1447 aa13.4□□□□□ -0.26
NSRP1-217ENST00000612959 FANCD2Q9BXW9 1451 aa13.37□□□□□ -0.27
NSRP1-217ENST00000612959 KIF21AQ7Z4S6 1674 aa13.34□□□□□ -0.27
NSRP1-217ENST00000612959 CEP164Q9UPV0 1460 aa13.33□□□□□ -0.28
NSRP1-217ENST00000612959 MRC2Q9UBG0 1479 aa13.25□□□□□ -0.29
NSRP1-217ENST00000612959 PRDM2Q13029 1718 aa13.25□□□□□ -0.29
NSRP1-217ENST00000612959 THOC2Q8NI27 1593 aaKnown RBP13.22□□□□□ -0.29
NSRP1-217ENST00000612959 URB2Q14146 1524 aaKnown RBP13.22□□□□□ -0.29
NSRP1-217ENST00000612959 ABCC8Q09428 1581 aa13.19□□□□□ -0.3
NSRP1-217ENST00000612959 PLPPR3Q6T4P5 718 aa13.19□□□□□ -0.3
NSRP1-217ENST00000612959 WDR62O43379 1518 aa13.16□□□□□ -0.3
NSRP1-217ENST00000612959 TOPBP1Q92547 1522 aa13.16□□□□□ -0.3
NSRP1-217ENST00000612959 CUX1P39880 1505 aa13.14□□□□□ -0.31
NSRP1-217ENST00000612959 WRNQ14191 1432 aaPredicted RBP eCLIP13.14□□□□□ -0.31
NSRP1-217ENST00000612959 DNMBPQ6XZF7 1577 aa13.13□□□□□ -0.31
NSRP1-217ENST00000612959 CUX2O14529 1486 aa13.12□□□□□ -0.31
NSRP1-217ENST00000612959 SYNJ1O43426 1573 aa13.09□□□□□ -0.31
NSRP1-217ENST00000612959 FGD5Q6ZNL6 1462 aa13.08□□□□□ -0.32
NSRP1-217ENST00000612959 POLA1P09884 1462 aaPredicted RBP13.07□□□□□ -0.32
NSRP1-217ENST00000612959 RAD54L2Q9Y4B4 1467 aa13.07□□□□□ -0.32
NSRP1-217ENST00000612959 SOGA1O94964 1423 aa13.05□□□□□ -0.32
NSRP1-217ENST00000612959 TRIM41Q8WV44 630 aa13.04□□□□□ -0.32
NSRP1-217ENST00000612959 TOP2BQ02880 1626 aa13.03□□□□□ -0.32
NSRP1-217ENST00000612959 IFT140Q96RY7 1462 aa13.01□□□□□ -0.33
NSRP1-217ENST00000612959 ZNF608Q9ULD9 1512 aaPredicted RBP13.01□□□□□ -0.33
NSRP1-217ENST00000612959 BIVM-ERCC5R4GMW8 1640 aa13□□□□□ -0.33
NSRP1-217ENST00000612959 TDRD9Q8NDG6 1382 aaKnown RBP13□□□□□ -0.33
NSRP1-217ENST00000612959 AQRO60306 1485 aaKnown RBP eCLIP12.98□□□□□ -0.337e-6■□□□□ 9.8
NSRP1-217ENST00000612959 TARBP1Q13395 1621 aaKnown RBP12.96□□□□□ -0.34
NSRP1-217ENST00000612959 ABCA10Q8WWZ4 1543 aa12.91□□□□□ -0.34
NSRP1-217ENST00000612959 EIF4G3O43432 1585 aaKnown RBP12.91□□□□□ -0.34
NSRP1-217ENST00000612959 MSH5O43196 834 aa12.89□□□□□ -0.35
NSRP1-217ENST00000612959 GAPVD1Q14C86 1478 aa12.88□□□□□ -0.35
NSRP1-217ENST00000612959 FBLN2P98095 1184 aa12.88□□□□□ -0.35
NSRP1-217ENST00000612959 FAM9AQ8IZU1 332 aaPredicted RBP12.88□□□□□ -0.35
NSRP1-217ENST00000612959 WDR97A6NE52 1622 aa12.86□□□□□ -0.35
NSRP1-217ENST00000612959 RUSC2Q8N2Y8 1516 aa12.84□□□□□ -0.35
NSRP1-217ENST00000612959 KIF27Q86VH2 1401 aa12.84□□□□□ -0.35
NSRP1-217ENST00000612959 GRIN2BQ13224 1484 aa12.83□□□□□ -0.35
NSRP1-217ENST00000612959 SNAPC4Q5SXM2 1469 aa12.83□□□□□ -0.36
NSRP1-217ENST00000612959 ABCA5Q8WWZ7 1642 aa12.83□□□□□ -0.36
NSRP1-217ENST00000612959 PIAS4Q8N2W9 510 aaPredicted RBP12.82□□□□□ -0.36
NSRP1-217ENST00000612959 CHMP7Q8WUX9 453 aaPredicted RBP12.79□□□□□ -0.36
NSRP1-217ENST00000612959 EHMT2Q96KQ7 1210 aa12.79□□□□□ -0.36
NSRP1-217ENST00000612959 PBRM1Q86U86 1689 aa12.78□□□□□ -0.36
NSRP1-217ENST00000612959 PPP6R1Q9UPN7 881 aa12.78□□□□□ -0.36
NSRP1-217ENST00000612959 IGF1RP08069 1367 aa12.78□□□□□ -0.36
NSRP1-217ENST00000612959 ADRA2BP18089 450 aa12.77□□□□□ -0.37
NSRP1-217ENST00000612959 MAGI1Q96QZ7 1491 aaPredicted RBP12.75□□□□□ -0.37
NSRP1-217ENST00000612959 ERICH3Q5RHP9 1530 aa12.74□□□□□ -0.37
NSRP1-217ENST00000612959 SYNJ2O15056 1496 aa12.72□□□□□ -0.37
NSRP1-217ENST00000612959 CARMIL1Q5VZK9 1371 aa12.72□□□□□ -0.37
NSRP1-217ENST00000612959 CSRNP3Q8WYN3 585 aa12.72□□□□□ -0.37
NSRP1-217ENST00000612959 FHAD1B1AJZ9 1412 aa12.72□□□□□ -0.37
NSRP1-217ENST00000612959 OSCARQ8IYS5 282 aa12.71□□□□□ -0.37
NSRP1-217ENST00000612959 ADAMTS12P58397 1594 aa12.71□□□□□ -0.37
NSRP1-217ENST00000612959 CHD1O14646 1710 aa12.69□□□□□ -0.38
NSRP1-217ENST00000612959 GRIN2AQ12879 1464 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms