RNA–Protein interactions for RNA: ENST00000611183.4

TMC4-205, Transcript of transmembrane channel like 4, humanhuman

TSL 2

Gene TMC4, Length 450 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMC4-205ENST00000611183 NISCHQ9Y2I1 1504 aa31.91■■■□□ 2.7
TMC4-205ENST00000611183 CCDC180Q9P1Z9 1646 aa28.14■■■□□ 2.09
TMC4-205ENST00000611183 ABCC9O60706 1549 aa27.13■■□□□ 1.93
TMC4-205ENST00000611183 ZCCHC6Q5VYS8 1495 aaKnown RBP26.7■■□□□ 1.87
TMC4-205ENST00000611183 DCAF1Q9Y4B6 1507 aa26.39■■□□□ 1.82
TMC4-205ENST00000611183 DCAF8L2P0C7V8 631 aa26.38■■□□□ 1.81
TMC4-205ENST00000611183 MYO15BQ96JP2 1530 aa26.32■■□□□ 1.8
TMC4-205ENST00000611183 NACADO15069 1562 aa26.32■■□□□ 1.8
TMC4-205ENST00000611183 RB1CC1Q8TDY2 1594 aa26.23■■□□□ 1.79
TMC4-205ENST00000611183 UNC13AQ9UPW8 1703 aa25.77■■□□□ 1.72
TMC4-205ENST00000611183 SCRIBQ14160 1630 aa25.76■■□□□ 1.71
TMC4-205ENST00000611183 BICRAQ9NZM4 1560 aa25.56■■□□□ 1.68
TMC4-205ENST00000611183 SHROOM4Q9ULL8 1493 aa25.5■■□□□ 1.67
TMC4-205ENST00000611183 PABPN1Q86U42 306 aaKnown RBP eCLIP25.43■■□□□ 1.66
TMC4-205ENST00000611183 CECR2Q9BXF3 1484 aa24.89■■□□□ 1.57
TMC4-205ENST00000611183 EIF4G1Q04637 1599 aaKnown RBP24.77■■□□□ 1.56
TMC4-205ENST00000611183 SMARCA4P51532 1647 aa24.68■■□□□ 1.54
TMC4-205ENST00000611183 MROH2BQ7Z745 1585 aa24.66■■□□□ 1.54
TMC4-205ENST00000611183 BAZ1AQ9NRL2 1556 aaPredicted RBP24.66■■□□□ 1.54
TMC4-205ENST00000611183 DNAJC5BQ9UF47 199 aa24.57■■□□□ 1.52
TMC4-205ENST00000611183 CC2D2AQ9P2K1 1620 aa24.57■■□□□ 1.52
TMC4-205ENST00000611183 RSF1Q96T23 1441 aaPredicted RBP24.51■■□□□ 1.51
TMC4-205ENST00000611183 PEG3Q9GZU2 1588 aa24.42■■□□□ 1.5
TMC4-205ENST00000611183 WIZO95785 1651 aa24.41■■□□□ 1.5
TMC4-205ENST00000611183 ATAD2BQ9ULI0 1458 aa24.41■■□□□ 1.5
TMC4-205ENST00000611183 SMARCA2P51531 1590 aa24.34■■□□□ 1.49
TMC4-205ENST00000611183 NCAPD3P42695 1498 aa24.32■■□□□ 1.48
TMC4-205ENST00000611183 HMGXB3Q12766 1538 aa24.23■■□□□ 1.47
TMC4-205ENST00000611183 BAZ1BQ9UIG0 1483 aaKnown RBP24.19■■□□□ 1.46
TMC4-205ENST00000611183 SUPT5HO00267 1087 aaKnown RBP24.17■■□□□ 1.46
TMC4-205ENST00000611183 TOP2AP11388 1531 aaKnown RBP24.13■■□□□ 1.45
TMC4-205ENST00000611183 CCDC88BA6NC98 1476 aa23.87■■□□□ 1.41
TMC4-205ENST00000611183 NESP48681 1621 aa23.66■■□□□ 1.38
TMC4-205ENST00000611183 CADPSQ9ULU8 1353 aa23.61■■□□□ 1.37
TMC4-205ENST00000611183 CFTRP13569 1480 aa23.59■■□□□ 1.37
TMC4-205ENST00000611183 LAMC3Q9Y6N6 1575 aa23.57■■□□□ 1.36
TMC4-205ENST00000611183 PRDM2Q13029 1718 aa23.45■■□□□ 1.34
TMC4-205ENST00000611183 KIF21AQ7Z4S6 1674 aa23.38■■□□□ 1.33
TMC4-205ENST00000611183 FANCD2Q9BXW9 1451 aa23.35■■□□□ 1.33
TMC4-205ENST00000611183 PDS5BQ9NTI5 1447 aa23.34■■□□□ 1.33
TMC4-205ENST00000611183 ERCC6Q03468 1493 aa23.25■■□□□ 1.31
TMC4-205ENST00000611183 CEP164Q9UPV0 1460 aa23.24■■□□□ 1.31
TMC4-205ENST00000611183 THOC2Q8NI27 1593 aaKnown RBP23.18■■□□□ 1.3
TMC4-205ENST00000611183 ABCC8Q09428 1581 aa23.16■■□□□ 1.3
TMC4-205ENST00000611183 URB2Q14146 1524 aaKnown RBP23.15■■□□□ 1.3
TMC4-205ENST00000611183 MRC2Q9UBG0 1479 aa23.14■■□□□ 1.29
TMC4-205ENST00000611183 WDR62O43379 1518 aa23.08■■□□□ 1.29
TMC4-205ENST00000611183 CUX1P39880 1505 aa23.08■■□□□ 1.29
TMC4-205ENST00000611183 TOPBP1Q92547 1522 aa23.06■■□□□ 1.28
TMC4-205ENST00000611183 SYNJ1O43426 1573 aa23.05■■□□□ 1.28
TMC4-205ENST00000611183 DNMBPQ6XZF7 1577 aa23.05■■□□□ 1.28
TMC4-205ENST00000611183 WRNQ14191 1432 aaPredicted RBP eCLIP23.04■■□□□ 1.28
TMC4-205ENST00000611183 BIVM-ERCC5R4GMW8 1640 aa22.98■■□□□ 1.27
TMC4-205ENST00000611183 TOP2BQ02880 1626 aa22.97■■□□□ 1.27
TMC4-205ENST00000611183 FGD5Q6ZNL6 1462 aa22.91■■□□□ 1.26
TMC4-205ENST00000611183 CUX2O14529 1486 aa22.9■■□□□ 1.26
TMC4-205ENST00000611183 POLA1P09884 1462 aaPredicted RBP22.9■■□□□ 1.26
TMC4-205ENST00000611183 CHIC1Q5VXU3 224 aa22.87■■□□□ 1.25
TMC4-205ENST00000611183 RAD54L2Q9Y4B4 1467 aa22.81■■□□□ 1.24
TMC4-205ENST00000611183 TARBP1Q13395 1621 aaKnown RBP22.8■■□□□ 1.24
TMC4-205ENST00000611183 SOGA1O94964 1423 aa22.76■■□□□ 1.23
TMC4-205ENST00000611183 TRIM41Q8WV44 630 aa22.75■■□□□ 1.23
TMC4-205ENST00000611183 IFT140Q96RY7 1462 aa22.74■■□□□ 1.23
TMC4-205ENST00000611183 WDR97A6NE52 1622 aa22.74■■□□□ 1.23
TMC4-205ENST00000611183 ZNF608Q9ULD9 1512 aaPredicted RBP22.7■■□□□ 1.22
TMC4-205ENST00000611183 ABCA10Q8WWZ4 1543 aa22.69■■□□□ 1.22
TMC4-205ENST00000611183 TDRD9Q8NDG6 1382 aaKnown RBP22.62■■□□□ 1.21
TMC4-205ENST00000611183 ABCA5Q8WWZ7 1642 aa22.6■■□□□ 1.21
TMC4-205ENST00000611183 AQRO60306 1485 aaKnown RBP eCLIP22.6■■□□□ 1.21
TMC4-205ENST00000611183 EIF4G3O43432 1585 aaKnown RBP22.59■■□□□ 1.21
TMC4-205ENST00000611183 RUSC2Q8N2Y8 1516 aa22.58■■□□□ 1.21
TMC4-205ENST00000611183 GAPVD1Q14C86 1478 aa22.51■■□□□ 1.19
TMC4-205ENST00000611183 KIF27Q86VH2 1401 aa22.48■■□□□ 1.19
TMC4-205ENST00000611183 PBRM1Q86U86 1689 aa22.47■■□□□ 1.19
TMC4-205ENST00000611183 GRIN2BQ13224 1484 aa22.43■■□□□ 1.18
TMC4-205ENST00000611183 IGF1RP08069 1367 aa22.41■■□□□ 1.18
TMC4-205ENST00000611183 ERICH3Q5RHP9 1530 aa22.4■■□□□ 1.18
TMC4-205ENST00000611183 SNAPC4Q5SXM2 1469 aa22.38■■□□□ 1.17
TMC4-205ENST00000611183 FAM9AQ8IZU1 332 aaPredicted RBP22.34■■□□□ 1.17
TMC4-205ENST00000611183 ADAMTS12P58397 1594 aa22.33■■□□□ 1.17
TMC4-205ENST00000611183 EEA1Q15075 1411 aa22.33■■□□□ 1.17
TMC4-205ENST00000611183 MAGI1Q96QZ7 1491 aaPredicted RBP22.32■■□□□ 1.16
TMC4-205ENST00000611183 CUL7Q14999 1698 aa22.28■■□□□ 1.16
TMC4-205ENST00000611183 CSRNP3Q8WYN3 585 aa22.28■■□□□ 1.16
TMC4-205ENST00000611183 FHAD1B1AJZ9 1412 aa22.26■■□□□ 1.15
TMC4-205ENST00000611183 PRXQ9BXM0 1461 aa22.25■■□□□ 1.15
TMC4-205ENST00000611183 SYNJ2O15056 1496 aa22.24■■□□□ 1.15
TMC4-205ENST00000611183 CARMIL1Q5VZK9 1371 aa22.24■■□□□ 1.15
TMC4-205ENST00000611183 CHD1O14646 1710 aa22.23■■□□□ 1.15
TMC4-205ENST00000611183 GRIN2AQ12879 1464 aa22.18■■□□□ 1.14
TMC4-205ENST00000611183 RAPGEF2Q9Y4G8 1499 aa22.15■■□□□ 1.14
TMC4-205ENST00000611183 KIF21BO75037 1637 aa22.15■■□□□ 1.14
TMC4-205ENST00000611183 FBLN2P98095 1184 aa22.13■■□□□ 1.13
TMC4-205ENST00000611183 CHMP7Q8WUX9 453 aaPredicted RBP22.13■■□□□ 1.13
TMC4-205ENST00000611183 CEP170Q5SW79 1584 aa22.1■■□□□ 1.13
TMC4-205ENST00000611183 NUP160Q12769 1436 aa22.07■■□□□ 1.12
TMC4-205ENST00000611183 EHMT2Q96KQ7 1210 aa22.03■■□□□ 1.12
TMC4-205ENST00000611183 GOLGA3Q08378 1498 aa22.02■■□□□ 1.12
TMC4-205ENST00000611183 CLASP1Q7Z460 1538 aa22.01■■□□□ 1.11
TMC4-205ENST00000611183 LOC105371045A0A1W2PR82 267 aa21.97■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 81.2 ms