RNA–Protein interactions for RNA: ENST00000610955.1

GTF2IRD2-204, Transcript of GTF2I repeat domain containing 2, humanhuman

TSL 3

Gene GTF2IRD2, Length 646 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2IRD2-204ENST00000610955 NISCHQ9Y2I1 1504 aa28.56■■■□□ 2.16
GTF2IRD2-204ENST00000610955 AEBP2Q6ZN18 517 aaPredicted RBP26.54■■□□□ 1.84
GTF2IRD2-204ENST00000610955 CCDC180Q9P1Z9 1646 aa25.25■■□□□ 1.63
GTF2IRD2-204ENST00000610955 CHIC1Q5VXU3 224 aa24.79■■□□□ 1.56
GTF2IRD2-204ENST00000610955 ABCC9O60706 1549 aa24.28■■□□□ 1.48
GTF2IRD2-204ENST00000610955 ZCCHC6Q5VYS8 1495 aaKnown RBP23.87■■□□□ 1.41
GTF2IRD2-204ENST00000610955 DCAF8L2P0C7V8 631 aa23.74■■□□□ 1.39
GTF2IRD2-204ENST00000610955 DCAF1Q9Y4B6 1507 aa23.68■■□□□ 1.38
GTF2IRD2-204ENST00000610955 NACADO15069 1562 aa23.65■■□□□ 1.38
GTF2IRD2-204ENST00000610955 MYO15BQ96JP2 1530 aa23.64■■□□□ 1.37
GTF2IRD2-204ENST00000610955 RB1CC1Q8TDY2 1594 aa23.58■■□□□ 1.37
GTF2IRD2-204ENST00000610955 SCRIBQ14160 1630 aa23.04■■□□□ 1.28
GTF2IRD2-204ENST00000610955 UNC13AQ9UPW8 1703 aa22.97■■□□□ 1.27
GTF2IRD2-204ENST00000610955 SHROOM4Q9ULL8 1493 aa22.79■■□□□ 1.24
GTF2IRD2-204ENST00000610955 BICRAQ9NZM4 1560 aa22.77■■□□□ 1.24
GTF2IRD2-204ENST00000610955 PABPN1Q86U42 306 aaKnown RBP eCLIP22.74■■□□□ 1.23
GTF2IRD2-204ENST00000610955 SENP3Q9H4L4 574 aaPredicted RBP22.69■■□□□ 1.22
GTF2IRD2-204ENST00000610955 PHF23Q9BUL5 403 aaPredicted RBP22.35■■□□□ 1.17
GTF2IRD2-204ENST00000610955 DNAJC5BQ9UF47 199 aa22.32■■□□□ 1.16
GTF2IRD2-204ENST00000610955 EIF4G1Q04637 1599 aaKnown RBP22.18■■□□□ 1.14
GTF2IRD2-204ENST00000610955 CECR2Q9BXF3 1484 aa22.15■■□□□ 1.14
GTF2IRD2-204ENST00000610955 BAZ1AQ9NRL2 1556 aaPredicted RBP22.14■■□□□ 1.13
GTF2IRD2-204ENST00000610955 SMARCA4P51532 1647 aa22.08■■□□□ 1.13
GTF2IRD2-204ENST00000610955 MROH2BQ7Z745 1585 aa21.99■■□□□ 1.11
GTF2IRD2-204ENST00000610955 CC2D2AQ9P2K1 1620 aa21.98■■□□□ 1.11
GTF2IRD2-204ENST00000610955 SMARCA2P51531 1590 aa21.9■■□□□ 1.1
GTF2IRD2-204ENST00000610955 RSF1Q96T23 1441 aaPredicted RBP21.89■■□□□ 1.1
GTF2IRD2-204ENST00000610955 PEG3Q9GZU2 1588 aa21.86■■□□□ 1.09
GTF2IRD2-204ENST00000610955 ATAD2BQ9ULI0 1458 aa21.85■■□□□ 1.09
GTF2IRD2-204ENST00000610955 NCAPD3P42695 1498 aa21.79■■□□□ 1.08
GTF2IRD2-204ENST00000610955 WIZO95785 1651 aa21.78■■□□□ 1.08
GTF2IRD2-204ENST00000610955 HMGXB3Q12766 1538 aa21.74■■□□□ 1.07
GTF2IRD2-204ENST00000610955 BAZ1BQ9UIG0 1483 aaKnown RBP21.73■■□□□ 1.07
GTF2IRD2-204ENST00000610955 SUPT5HO00267 1087 aaKnown RBP21.68■■□□□ 1.06
GTF2IRD2-204ENST00000610955 TOP2AP11388 1531 aaKnown RBP21.61■■□□□ 1.05
GTF2IRD2-204ENST00000610955 CCDC88BA6NC98 1476 aa21.32■■□□□ 1
GTF2IRD2-204ENST00000610955 FOXD1Q16676 465 aa21.21■□□□□ 0.99
GTF2IRD2-204ENST00000610955 CADPSQ9ULU8 1353 aa21.19■□□□□ 0.98
GTF2IRD2-204ENST00000610955 LAMC3Q9Y6N6 1575 aa21.17■□□□□ 0.98
GTF2IRD2-204ENST00000610955 CFTRP13569 1480 aa21.13■□□□□ 0.97
GTF2IRD2-204ENST00000610955 NESP48681 1621 aa21.1■□□□□ 0.97
GTF2IRD2-204ENST00000610955 PDS5BQ9NTI5 1447 aa21.05■□□□□ 0.96
GTF2IRD2-204ENST00000610955 PRDM2Q13029 1718 aa21.03■□□□□ 0.96
GTF2IRD2-204ENST00000610955 ERCC6Q03468 1493 aa20.96■□□□□ 0.95
GTF2IRD2-204ENST00000610955 FANCD2Q9BXW9 1451 aa20.94■□□□□ 0.94
GTF2IRD2-204ENST00000610955 DNAJC5Q9H3Z4 198 aa20.94■□□□□ 0.94
GTF2IRD2-204ENST00000610955 CEP164Q9UPV0 1460 aa20.9■□□□□ 0.94
GTF2IRD2-204ENST00000610955 KIF21AQ7Z4S6 1674 aa20.88■□□□□ 0.93
GTF2IRD2-204ENST00000610955 MRC2Q9UBG0 1479 aa20.77■□□□□ 0.92
GTF2IRD2-204ENST00000610955 ABCC8Q09428 1581 aa20.72■□□□□ 0.91
GTF2IRD2-204ENST00000610955 THOC2Q8NI27 1593 aaKnown RBP20.72■□□□□ 0.91
GTF2IRD2-204ENST00000610955 WRNQ14191 1432 aaPredicted RBP eCLIP20.68■□□□□ 0.9
GTF2IRD2-204ENST00000610955 WDR62O43379 1518 aa20.68■□□□□ 0.9
GTF2IRD2-204ENST00000610955 URB2Q14146 1524 aaKnown RBP20.68■□□□□ 0.9
GTF2IRD2-204ENST00000610955 DNMBPQ6XZF7 1577 aa20.67■□□□□ 0.9
GTF2IRD2-204ENST00000610955 TOPBP1Q92547 1522 aa20.64■□□□□ 0.9
GTF2IRD2-204ENST00000610955 CUX1P39880 1505 aa20.62■□□□□ 0.89
GTF2IRD2-204ENST00000610955 CUX2O14529 1486 aa20.58■□□□□ 0.89
GTF2IRD2-204ENST00000610955 TOP2BQ02880 1626 aa20.57■□□□□ 0.88
GTF2IRD2-204ENST00000610955 BIVM-ERCC5R4GMW8 1640 aa20.56■□□□□ 0.88
GTF2IRD2-204ENST00000610955 SYNJ1O43426 1573 aa20.55■□□□□ 0.88
GTF2IRD2-204ENST00000610955 FGD5Q6ZNL6 1462 aa20.5■□□□□ 0.87
GTF2IRD2-204ENST00000610955 TRIM41Q8WV44 630 aa20.49■□□□□ 0.87
GTF2IRD2-204ENST00000610955 POLA1P09884 1462 aaPredicted RBP20.49■□□□□ 0.87
GTF2IRD2-204ENST00000610955 IFT140Q96RY7 1462 aa20.44■□□□□ 0.86
GTF2IRD2-204ENST00000610955 SOGA1O94964 1423 aa20.44■□□□□ 0.86
GTF2IRD2-204ENST00000610955 RAD54L2Q9Y4B4 1467 aa20.37■□□□□ 0.85
GTF2IRD2-204ENST00000610955 TARBP1Q13395 1621 aaKnown RBP20.36■□□□□ 0.85
GTF2IRD2-204ENST00000610955 ABCA10Q8WWZ4 1543 aa20.34■□□□□ 0.85
GTF2IRD2-204ENST00000610955 WDR97A6NE52 1622 aa20.31■□□□□ 0.84
GTF2IRD2-204ENST00000610955 ZNF608Q9ULD9 1512 aaPredicted RBP20.26■□□□□ 0.83
GTF2IRD2-204ENST00000610955 TDRD9Q8NDG6 1382 aaKnown RBP20.25■□□□□ 0.83
GTF2IRD2-204ENST00000610955 POTEDQ86YR6 584 aa20.25■□□□□ 0.83
GTF2IRD2-204ENST00000610955 KIF27Q86VH2 1401 aa20.24■□□□□ 0.83
GTF2IRD2-204ENST00000610955 EIF4G3O43432 1585 aaKnown RBP20.22■□□□□ 0.83
GTF2IRD2-204ENST00000610955 AQRO60306 1485 aaKnown RBP eCLIP20.21■□□□□ 0.83
GTF2IRD2-204ENST00000610955 GAPVD1Q14C86 1478 aa20.21■□□□□ 0.83
GTF2IRD2-204ENST00000610955 ABCA5Q8WWZ7 1642 aa20.2■□□□□ 0.82
GTF2IRD2-204ENST00000610955 GRIN2BQ13224 1484 aa20.17■□□□□ 0.82
GTF2IRD2-204ENST00000610955 EEA1Q15075 1411 aa20.14■□□□□ 0.81
GTF2IRD2-204ENST00000610955 PBRM1Q86U86 1689 aa20.13■□□□□ 0.81
GTF2IRD2-204ENST00000610955 ERICH3Q5RHP9 1530 aa20.12■□□□□ 0.81
GTF2IRD2-204ENST00000610955 MAGI1Q96QZ7 1491 aaPredicted RBP20.07■□□□□ 0.8
GTF2IRD2-204ENST00000610955 RUSC2Q8N2Y8 1516 aa20.07■□□□□ 0.8
GTF2IRD2-204ENST00000610955 IGF1RP08069 1367 aa20.06■□□□□ 0.8
GTF2IRD2-204ENST00000610955 SNAPC4Q5SXM2 1469 aa20.05■□□□□ 0.8
GTF2IRD2-204ENST00000610955 CUL7Q14999 1698 aa20.03■□□□□ 0.8
GTF2IRD2-204ENST00000610955 FAM9AQ8IZU1 332 aaPredicted RBP20.01■□□□□ 0.79
GTF2IRD2-204ENST00000610955 CSRNP3Q8WYN3 585 aa20.01■□□□□ 0.79
GTF2IRD2-204ENST00000610955 FHAD1B1AJZ9 1412 aa20■□□□□ 0.79
GTF2IRD2-204ENST00000610955 ADAMTS12P58397 1594 aa20■□□□□ 0.79
GTF2IRD2-204ENST00000610955 MSH5O43196 834 aa19.99■□□□□ 0.79
GTF2IRD2-204ENST00000610955 SYNJ2O15056 1496 aa19.98■□□□□ 0.79
GTF2IRD2-204ENST00000610955 CARMIL1Q5VZK9 1371 aa19.97■□□□□ 0.79
GTF2IRD2-204ENST00000610955 CHMP7Q8WUX9 453 aaPredicted RBP19.96■□□□□ 0.79
GTF2IRD2-204ENST00000610955 FBLN2P98095 1184 aa19.95■□□□□ 0.78
GTF2IRD2-204ENST00000610955 RAPGEF2Q9Y4G8 1499 aa19.91■□□□□ 0.78
GTF2IRD2-204ENST00000610955 PRXQ9BXM0 1461 aa19.9■□□□□ 0.78
GTF2IRD2-204ENST00000610955 CHD1O14646 1710 aa19.89■□□□□ 0.77
GTF2IRD2-204ENST00000610955 GRIN2AQ12879 1464 aa19.88■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms