RNA–Protein interactions for RNA: ENST00000610693.4

IVD-213, Transcript of isovaleryl-CoA dehydrogenase, humanhuman

TSL 2

Gene IVD, Length 668 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IVD-213ENST00000610693 NISCHQ9Y2I1 1504 aa42.46■■■■■ 4.39
IVD-213ENST00000610693 CCDC180Q9P1Z9 1646 aa37.69■■■■□ 3.62
IVD-213ENST00000610693 ABCC9O60706 1549 aa36.77■■■■□ 3.48
IVD-213ENST00000610693 DCAF8L2P0C7V8 631 aa35.43■■■■□ 3.26
IVD-213ENST00000610693 ZCCHC6Q5VYS8 1495 aaKnown RBP35.42■■■■□ 3.26
IVD-213ENST00000610693 RB1CC1Q8TDY2 1594 aa35.37■■■■□ 3.25
IVD-213ENST00000610693 NACADO15069 1562 aa35.33■■■■□ 3.25
IVD-213ENST00000610693 MYO15BQ96JP2 1530 aa35.09■■■■□ 3.21
IVD-213ENST00000610693 DCAF1Q9Y4B6 1507 aa35.06■■■■□ 3.2
IVD-213ENST00000610693 UNC13AQ9UPW8 1703 aa34.74■■■■□ 3.15
IVD-213ENST00000610693 SCRIBQ14160 1630 aa34.52■■■■□ 3.12
IVD-213ENST00000610693 PABPN1Q86U42 306 aaKnown RBP eCLIP34.36■■■■□ 3.09
IVD-213ENST00000610693 BICRAQ9NZM4 1560 aa34.36■■■■□ 3.09
IVD-213ENST00000610693 DNAJC5BQ9UF47 199 aa33.93■■■■□ 3.02
IVD-213ENST00000610693 SHROOM4Q9ULL8 1493 aa33.83■■■■□ 3.01
IVD-213ENST00000610693 EIF4G1Q04637 1599 aaKnown RBP33.41■■■□□ 2.94
IVD-213ENST00000610693 CC2D2AQ9P2K1 1620 aa33.25■■■□□ 2.91
IVD-213ENST00000610693 CECR2Q9BXF3 1484 aa33.12■■■□□ 2.89
IVD-213ENST00000610693 SMARCA4P51532 1647 aa32.97■■■□□ 2.87
IVD-213ENST00000610693 BAZ1AQ9NRL2 1556 aaPredicted RBP32.89■■■□□ 2.86
IVD-213ENST00000610693 MROH2BQ7Z745 1585 aa32.79■■■□□ 2.84
IVD-213ENST00000610693 ATAD2BQ9ULI0 1458 aa32.67■■■□□ 2.82
IVD-213ENST00000610693 SMARCA2P51531 1590 aa32.63■■■□□ 2.81
IVD-213ENST00000610693 NCAPD3P42695 1498 aa32.56■■■□□ 2.8
IVD-213ENST00000610693 PEG3Q9GZU2 1588 aa32.55■■■□□ 2.8
IVD-213ENST00000610693 WIZO95785 1651 aa32.5■■■□□ 2.79
IVD-213ENST00000610693 HMGXB3Q12766 1538 aa32.48■■■□□ 2.79
IVD-213ENST00000610693 BAZ1BQ9UIG0 1483 aaKnown RBP32.44■■■□□ 2.78
IVD-213ENST00000610693 RSF1Q96T23 1441 aaPredicted RBP32.42■■■□□ 2.78
IVD-213ENST00000610693 TOP2AP11388 1531 aaKnown RBP32.08■■■□□ 2.73
IVD-213ENST00000610693 NESP48681 1621 aa31.89■■■□□ 2.7
IVD-213ENST00000610693 SUPT5HO00267 1087 aaKnown RBP31.79■■■□□ 2.68
IVD-213ENST00000610693 LAMC3Q9Y6N6 1575 aa31.74■■■□□ 2.67
IVD-213ENST00000610693 CCDC88BA6NC98 1476 aa31.69■■■□□ 2.66
IVD-213ENST00000610693 CADPSQ9ULU8 1353 aa31.64■■■□□ 2.66
IVD-213ENST00000610693 ERCC6Q03468 1493 aa31.64■■■□□ 2.66
IVD-213ENST00000610693 KIF21AQ7Z4S6 1674 aa31.57■■■□□ 2.65
IVD-213ENST00000610693 CFTRP13569 1480 aa31.51■■■□□ 2.63
IVD-213ENST00000610693 PDS5BQ9NTI5 1447 aa31.47■■■□□ 2.63
IVD-213ENST00000610693 PRDM2Q13029 1718 aa31.44■■■□□ 2.62
IVD-213ENST00000610693 THOC2Q8NI27 1593 aaKnown RBP31.36■■■□□ 2.61
IVD-213ENST00000610693 FANCD2Q9BXW9 1451 aa31.35■■■□□ 2.61
IVD-213ENST00000610693 DNAJC5Q9H3Z4 198 aa31.32■■■□□ 2.6
IVD-213ENST00000610693 CEP164Q9UPV0 1460 aa31.3■■■□□ 2.6
IVD-213ENST00000610693 CUX2O14529 1486 aa31.24■■■□□ 2.59
IVD-213ENST00000610693 MRC2Q9UBG0 1479 aa31.21■■■□□ 2.59
IVD-213ENST00000610693 WDR62O43379 1518 aa31.1■■■□□ 2.57
IVD-213ENST00000610693 URB2Q14146 1524 aaKnown RBP31.06■■■□□ 2.56
IVD-213ENST00000610693 TOPBP1Q92547 1522 aa30.88■■■□□ 2.53
IVD-213ENST00000610693 DNMBPQ6XZF7 1577 aa30.87■■■□□ 2.53
IVD-213ENST00000610693 ABCC8Q09428 1581 aa30.76■■■□□ 2.52
IVD-213ENST00000610693 CUX1P39880 1505 aa30.75■■■□□ 2.51
IVD-213ENST00000610693 POLA1P09884 1462 aaPredicted RBP30.63■■■□□ 2.49
IVD-213ENST00000610693 FGD5Q6ZNL6 1462 aa30.61■■■□□ 2.49
IVD-213ENST00000610693 IFT140Q96RY7 1462 aa30.58■■■□□ 2.49
IVD-213ENST00000610693 SYNJ1O43426 1573 aa30.58■■■□□ 2.49
IVD-213ENST00000610693 WRNQ14191 1432 aaPredicted RBP eCLIP30.56■■■□□ 2.48
IVD-213ENST00000610693 TARBP1Q13395 1621 aaKnown RBP30.55■■■□□ 2.48
IVD-213ENST00000610693 BIVM-ERCC5R4GMW8 1640 aa30.54■■■□□ 2.48
IVD-213ENST00000610693 RAD54L2Q9Y4B4 1467 aa30.53■■■□□ 2.48
IVD-213ENST00000610693 ZNF608Q9ULD9 1512 aaPredicted RBP30.52■■■□□ 2.48
IVD-213ENST00000610693 TOP2BQ02880 1626 aa30.51■■■□□ 2.47
IVD-213ENST00000610693 SOGA1O94964 1423 aa30.46■■■□□ 2.47
IVD-213ENST00000610693 EIF4G3O43432 1585 aaKnown RBP30.45■■■□□ 2.46
IVD-213ENST00000610693 WDR97A6NE52 1622 aa30.4■■■□□ 2.46
IVD-213ENST00000610693 AQRO60306 1485 aaKnown RBP eCLIP30.35■■■□□ 2.459e-6■■□□□ 13.1
IVD-213ENST00000610693 TDRD9Q8NDG6 1382 aaKnown RBP30.3■■■□□ 2.44
IVD-213ENST00000610693 ABCA10Q8WWZ4 1543 aa30.25■■■□□ 2.43
IVD-213ENST00000610693 ABCA5Q8WWZ7 1642 aa30.19■■■□□ 2.42
IVD-213ENST00000610693 PBRM1Q86U86 1689 aa30.19■■■□□ 2.42
IVD-213ENST00000610693 GAPVD1Q14C86 1478 aa30.13■■■□□ 2.41
IVD-213ENST00000610693 SNAPC4Q5SXM2 1469 aa30.1■■■□□ 2.41
IVD-213ENST00000610693 GRIN2BQ13224 1484 aa30.09■■■□□ 2.41
IVD-213ENST00000610693 CHD1O14646 1710 aa30.08■■■□□ 2.41
IVD-213ENST00000610693 MAGI1Q96QZ7 1491 aaPredicted RBP29.98■■■□□ 2.39
IVD-213ENST00000610693 FBLN2P98095 1184 aa29.94■■■□□ 2.38
IVD-213ENST00000610693 TRIM41Q8WV44 630 aa29.94■■■□□ 2.38
IVD-213ENST00000610693 ADAMTS12P58397 1594 aa29.91■■■□□ 2.38
IVD-213ENST00000610693 ERICH3Q5RHP9 1530 aa29.89■■■□□ 2.38
IVD-213ENST00000610693 KIF27Q86VH2 1401 aa29.88■■■□□ 2.37
IVD-213ENST00000610693 SYNJ2O15056 1496 aa29.87■■■□□ 2.37
IVD-213ENST00000610693 OSCARQ8IYS5 282 aa29.85■■■□□ 2.37
IVD-213ENST00000610693 CHMP7Q8WUX9 453 aaPredicted RBP29.81■■■□□ 2.36
IVD-213ENST00000610693 RUSC2Q8N2Y8 1516 aa29.79■■■□□ 2.36
IVD-213ENST00000610693 FHAD1B1AJZ9 1412 aa29.76■■■□□ 2.35
IVD-213ENST00000610693 GRIN2AQ12879 1464 aa29.74■■■□□ 2.35
IVD-213ENST00000610693 CHIC1Q5VXU3 224 aa29.72■■■□□ 2.35
IVD-213ENST00000610693 IGF1RP08069 1367 aa29.72■■■□□ 2.35
IVD-213ENST00000610693 CUL7Q14999 1698 aa29.71■■■□□ 2.35
IVD-213ENST00000610693 CLASP1Q7Z460 1538 aa29.65■■■□□ 2.34
IVD-213ENST00000610693 CEP170Q5SW79 1584 aa29.64■■■□□ 2.33
IVD-213ENST00000610693 NUP160Q12769 1436 aa29.56■■■□□ 2.32
IVD-213ENST00000610693 CARMIL1Q5VZK9 1371 aa29.56■■■□□ 2.32
IVD-213ENST00000610693 RIMBP3CA6NJZ7 1639 aa29.53■■■□□ 2.32
IVD-213ENST00000610693 RIMBP3BA6NNM3 1639 aa29.53■■■□□ 2.32
IVD-213ENST00000610693 RIMBP3Q9UFD9 1639 aa29.53■■■□□ 2.32
IVD-213ENST00000610693 ARHGEF11O15085 1522 aa29.5■■■□□ 2.31
IVD-213ENST00000610693 FAM9AQ8IZU1 332 aaPredicted RBP29.44■■■□□ 2.3
IVD-213ENST00000610693 RAPGEF2Q9Y4G8 1499 aa29.42■■■□□ 2.3
IVD-213ENST00000610693 EEA1Q15075 1411 aa29.37■■■□□ 2.29
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms