RNA–Protein interactions for RNA: ENST00000610194.1

LINC00454-207, long intergenic non-protein coding RNA 454, humanhuman

TSL 5

Gene LINC00454, Length 710 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00454-207ENST00000610194 NISCHQ9Y2I1 1504 aa27.7■■■□□ 2.02
LINC00454-207ENST00000610194 CCDC180Q9P1Z9 1646 aa24.54■■□□□ 1.52
LINC00454-207ENST00000610194 ABCC9O60706 1549 aa23.95■■□□□ 1.43
LINC00454-207ENST00000610194 DCAF8L2P0C7V8 631 aa23.25■■□□□ 1.31
LINC00454-207ENST00000610194 ZCCHC6Q5VYS8 1495 aaKnown RBP23.1■■□□□ 1.29
LINC00454-207ENST00000610194 RB1CC1Q8TDY2 1594 aa23.03■■□□□ 1.28
LINC00454-207ENST00000610194 NACADO15069 1562 aa23.01■■□□□ 1.27
LINC00454-207ENST00000610194 DCAF1Q9Y4B6 1507 aa22.82■■□□□ 1.24
LINC00454-207ENST00000610194 MYO15BQ96JP2 1530 aa22.82■■□□□ 1.24
LINC00454-207ENST00000610194 UNC13AQ9UPW8 1703 aa22.62■■□□□ 1.21
LINC00454-207ENST00000610194 SCRIBQ14160 1630 aa22.54■■□□□ 1.2
LINC00454-207ENST00000610194 PABPN1Q86U42 306 aaKnown RBP eCLIP22.44■■□□□ 1.18
LINC00454-207ENST00000610194 BICRAQ9NZM4 1560 aa22.33■■□□□ 1.16
LINC00454-207ENST00000610194 SHROOM4Q9ULL8 1493 aa22.19■■□□□ 1.14
LINC00454-207ENST00000610194 DNAJC5BQ9UF47 199 aa21.78■■□□□ 1.08
LINC00454-207ENST00000610194 EIF4G1Q04637 1599 aaKnown RBP21.74■■□□□ 1.07
LINC00454-207ENST00000610194 CC2D2AQ9P2K1 1620 aa21.64■■□□□ 1.05
LINC00454-207ENST00000610194 CECR2Q9BXF3 1484 aa21.62■■□□□ 1.05
LINC00454-207ENST00000610194 SMARCA4P51532 1647 aa21.49■■□□□ 1.03
LINC00454-207ENST00000610194 BAZ1AQ9NRL2 1556 aaPredicted RBP21.46■■□□□ 1.03
LINC00454-207ENST00000610194 MROH2BQ7Z745 1585 aa21.4■■□□□ 1.02
LINC00454-207ENST00000610194 ATAD2BQ9ULI0 1458 aa21.29■■□□□ 1
LINC00454-207ENST00000610194 SMARCA2P51531 1590 aa21.27■□□□□ 0.99
LINC00454-207ENST00000610194 WIZO95785 1651 aa21.24■□□□□ 0.99
LINC00454-207ENST00000610194 NCAPD3P42695 1498 aa21.2■□□□□ 0.98
LINC00454-207ENST00000610194 PEG3Q9GZU2 1588 aa21.19■□□□□ 0.98
LINC00454-207ENST00000610194 RSF1Q96T23 1441 aaPredicted RBP21.18■□□□□ 0.98
LINC00454-207ENST00000610194 BAZ1BQ9UIG0 1483 aaKnown RBP21.17■□□□□ 0.98
LINC00454-207ENST00000610194 HMGXB3Q12766 1538 aa21.13■□□□□ 0.97
LINC00454-207ENST00000610194 TOP2AP11388 1531 aaKnown RBP20.94■□□□□ 0.94
LINC00454-207ENST00000610194 SUPT5HO00267 1087 aaKnown RBP20.94■□□□□ 0.94
LINC00454-207ENST00000610194 NESP48681 1621 aa20.78■□□□□ 0.92
LINC00454-207ENST00000610194 CCDC88BA6NC98 1476 aa20.71■□□□□ 0.91
LINC00454-207ENST00000610194 LAMC3Q9Y6N6 1575 aa20.65■□□□□ 0.9
LINC00454-207ENST00000610194 ERCC6Q03468 1493 aa20.62■□□□□ 0.89
LINC00454-207ENST00000610194 CADPSQ9ULU8 1353 aa20.62■□□□□ 0.89
LINC00454-207ENST00000610194 KIF21AQ7Z4S6 1674 aa20.57■□□□□ 0.88
LINC00454-207ENST00000610194 CFTRP13569 1480 aa20.53■□□□□ 0.88
LINC00454-207ENST00000610194 PDS5BQ9NTI5 1447 aa20.51■□□□□ 0.87
LINC00454-207ENST00000610194 PRDM2Q13029 1718 aa20.5■□□□□ 0.87
LINC00454-207ENST00000610194 FANCD2Q9BXW9 1451 aa20.44■□□□□ 0.86
LINC00454-207ENST00000610194 CEP164Q9UPV0 1460 aa20.4■□□□□ 0.86
LINC00454-207ENST00000610194 THOC2Q8NI27 1593 aaKnown RBP20.37■□□□□ 0.85
LINC00454-207ENST00000610194 MRC2Q9UBG0 1479 aa20.31■□□□□ 0.84
LINC00454-207ENST00000610194 URB2Q14146 1524 aaKnown RBP20.23■□□□□ 0.83
LINC00454-207ENST00000610194 WDR62O43379 1518 aa20.22■□□□□ 0.83
LINC00454-207ENST00000610194 CUX2O14529 1486 aa20.22■□□□□ 0.83
LINC00454-207ENST00000610194 TOPBP1Q92547 1522 aa20.13■□□□□ 0.81
LINC00454-207ENST00000610194 DNMBPQ6XZF7 1577 aa20.12■□□□□ 0.81
LINC00454-207ENST00000610194 ABCC8Q09428 1581 aa20.09■□□□□ 0.81
LINC00454-207ENST00000610194 CUX1P39880 1505 aa20.07■□□□□ 0.8
LINC00454-207ENST00000610194 WRNQ14191 1432 aaPredicted RBP eCLIP19.99■□□□□ 0.79
LINC00454-207ENST00000610194 SYNJ1O43426 1573 aa19.98■□□□□ 0.79
LINC00454-207ENST00000610194 FGD5Q6ZNL6 1462 aa19.98■□□□□ 0.79
LINC00454-207ENST00000610194 POLA1P09884 1462 aaPredicted RBP19.97■□□□□ 0.79
LINC00454-207ENST00000610194 RAD54L2Q9Y4B4 1467 aa19.93■□□□□ 0.78
LINC00454-207ENST00000610194 IFT140Q96RY7 1462 aa19.92■□□□□ 0.78
LINC00454-207ENST00000610194 TOP2BQ02880 1626 aa19.92■□□□□ 0.78
LINC00454-207ENST00000610194 BIVM-ERCC5R4GMW8 1640 aa19.92■□□□□ 0.78
LINC00454-207ENST00000610194 SOGA1O94964 1423 aa19.9■□□□□ 0.78
LINC00454-207ENST00000610194 TARBP1Q13395 1621 aaKnown RBP19.89■□□□□ 0.77
LINC00454-207ENST00000610194 ZNF608Q9ULD9 1512 aaPredicted RBP19.89■□□□□ 0.77
LINC00454-207ENST00000610194 EIF4G3O43432 1585 aaKnown RBP19.83■□□□□ 0.76
LINC00454-207ENST00000610194 TDRD9Q8NDG6 1382 aaKnown RBP19.81■□□□□ 0.76
LINC00454-207ENST00000610194 AQRO60306 1485 aaKnown RBP eCLIP19.8■□□□□ 0.76
LINC00454-207ENST00000610194 WDR97A6NE52 1622 aa19.8■□□□□ 0.76
LINC00454-207ENST00000610194 ABCA10Q8WWZ4 1543 aa19.72■□□□□ 0.75
LINC00454-207ENST00000610194 TRIM41Q8WV44 630 aa19.7■□□□□ 0.74
LINC00454-207ENST00000610194 PBRM1Q86U86 1689 aa19.69■□□□□ 0.74
LINC00454-207ENST00000610194 ABCA5Q8WWZ7 1642 aa19.67■□□□□ 0.74
LINC00454-207ENST00000610194 GAPVD1Q14C86 1478 aa19.67■□□□□ 0.74
LINC00454-207ENST00000610194 GRIN2BQ13224 1484 aa19.62■□□□□ 0.73
LINC00454-207ENST00000610194 SNAPC4Q5SXM2 1469 aa19.62■□□□□ 0.73
LINC00454-207ENST00000610194 FBLN2P98095 1184 aa19.61■□□□□ 0.73
LINC00454-207ENST00000610194 CHD1O14646 1710 aa19.59■□□□□ 0.73
LINC00454-207ENST00000610194 CHIC1Q5VXU3 224 aa19.55■□□□□ 0.72
LINC00454-207ENST00000610194 KIF27Q86VH2 1401 aa19.54■□□□□ 0.72
LINC00454-207ENST00000610194 MAGI1Q96QZ7 1491 aaPredicted RBP19.53■□□□□ 0.72
LINC00454-207ENST00000610194 RUSC2Q8N2Y8 1516 aa19.51■□□□□ 0.71
LINC00454-207ENST00000610194 CHMP7Q8WUX9 453 aaPredicted RBP19.5■□□□□ 0.71
LINC00454-207ENST00000610194 ADAMTS12P58397 1594 aa19.49■□□□□ 0.71
LINC00454-207ENST00000610194 ERICH3Q5RHP9 1530 aa19.49■□□□□ 0.71
LINC00454-207ENST00000610194 SYNJ2O15056 1496 aa19.47■□□□□ 0.71
LINC00454-207ENST00000610194 OSCARQ8IYS5 282 aa19.46■□□□□ 0.71
LINC00454-207ENST00000610194 IGF1RP08069 1367 aa19.43■□□□□ 0.7
LINC00454-207ENST00000610194 FHAD1B1AJZ9 1412 aa19.42■□□□□ 0.7
LINC00454-207ENST00000610194 DNAJC5Q9H3Z4 198 aa19.41■□□□□ 0.7
LINC00454-207ENST00000610194 FAM9AQ8IZU1 332 aaPredicted RBP19.4■□□□□ 0.7
LINC00454-207ENST00000610194 CUL7Q14999 1698 aa19.4■□□□□ 0.7
LINC00454-207ENST00000610194 GRIN2AQ12879 1464 aa19.38■□□□□ 0.69
LINC00454-207ENST00000610194 CARMIL1Q5VZK9 1371 aa19.33■□□□□ 0.69
LINC00454-207ENST00000610194 CEP170Q5SW79 1584 aa19.32■□□□□ 0.68
LINC00454-207ENST00000610194 CLASP1Q7Z460 1538 aa19.27■□□□□ 0.68
LINC00454-207ENST00000610194 CSRNP3Q8WYN3 585 aa19.25■□□□□ 0.67
LINC00454-207ENST00000610194 RAPGEF2Q9Y4G8 1499 aa19.24■□□□□ 0.67
LINC00454-207ENST00000610194 EHMT2Q96KQ7 1210 aa19.24■□□□□ 0.67
LINC00454-207ENST00000610194 NUP160Q12769 1436 aa19.24■□□□□ 0.67
LINC00454-207ENST00000610194 EEA1Q15075 1411 aa19.24■□□□□ 0.67
LINC00454-207ENST00000610194 RIMBP3CA6NJZ7 1639 aa19.19■□□□□ 0.66
LINC00454-207ENST00000610194 RIMBP3BA6NNM3 1639 aa19.19■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms