RNA–Protein interactions for RNA: ENST00000609492.1

RIT1-206, Transcript of Ras like without CAAX 1, humanhuman

TSL 1 (best)

Gene RIT1, Length 574 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIT1-206ENST00000609492 NISCHQ9Y2I1 1504 aa19.69■□□□□ 0.74
RIT1-206ENST00000609492 ABCC9O60706 1549 aa19.35■□□□□ 0.69
RIT1-206ENST00000609492 DNAJC5BQ9UF47 199 aa19.21■□□□□ 0.67
RIT1-206ENST00000609492 DNAJC5Q9H3Z4 198 aa18.41■□□□□ 0.54
RIT1-206ENST00000609492 CCDC180Q9P1Z9 1646 aa18.23■□□□□ 0.51
RIT1-206ENST00000609492 RB1CC1Q8TDY2 1594 aa17.87■□□□□ 0.45
RIT1-206ENST00000609492 PABPN1Q86U42 306 aaKnown RBP eCLIP17.78■□□□□ 0.44
RIT1-206ENST00000609492 UNC13AQ9UPW8 1703 aa17.64■□□□□ 0.41
RIT1-206ENST00000609492 CECR2Q9BXF3 1484 aa17.52■□□□□ 0.4
RIT1-206ENST00000609492 BICRAQ9NZM4 1560 aa17.49■□□□□ 0.39
RIT1-206ENST00000609492 CC2D2AQ9P2K1 1620 aa17.45■□□□□ 0.38
RIT1-206ENST00000609492 NACADO15069 1562 aa17.45■□□□□ 0.38
RIT1-206ENST00000609492 TRIM41Q8WV44 630 aa17.13■□□□□ 0.33
RIT1-206ENST00000609492 CUX2O14529 1486 aa17.12■□□□□ 0.33
RIT1-206ENST00000609492 EIF4G1Q04637 1599 aaKnown RBP17.11■□□□□ 0.33
RIT1-206ENST00000609492 DCAF8L2P0C7V8 631 aa17.02■□□□□ 0.32
RIT1-206ENST00000609492 SHROOM4Q9ULL8 1493 aa16.99■□□□□ 0.31
RIT1-206ENST00000609492 MYO15BQ96JP2 1530 aa16.79■□□□□ 0.28
RIT1-206ENST00000609492 ERCC6Q03468 1493 aa16.73■□□□□ 0.27
RIT1-206ENST00000609492 SCRIBQ14160 1630 aa16.56■□□□□ 0.24
RIT1-206ENST00000609492 THOC2Q8NI27 1593 aaKnown RBP16.43■□□□□ 0.22
RIT1-206ENST00000609492 AEBP2Q6ZN18 517 aaPredicted RBP16.35■□□□□ 0.21
RIT1-206ENST00000609492 NESP48681 1621 aa16.32■□□□□ 0.2
RIT1-206ENST00000609492 BAZ1AQ9NRL2 1556 aaPredicted RBP16.2■□□□□ 0.18
RIT1-206ENST00000609492 SMARCA2P51531 1590 aa16.18■□□□□ 0.18
RIT1-206ENST00000609492 DCAF1Q9Y4B6 1507 aa16.16■□□□□ 0.18
RIT1-206ENST00000609492 RIMBP3CA6NJZ7 1639 aa16.15■□□□□ 0.18
RIT1-206ENST00000609492 RIMBP3BA6NNM3 1639 aa16.15■□□□□ 0.18
RIT1-206ENST00000609492 RIMBP3Q9UFD9 1639 aa16.15■□□□□ 0.18
RIT1-206ENST00000609492 KIF21AQ7Z4S6 1674 aa16.13■□□□□ 0.17
RIT1-206ENST00000609492 NCAPD3P42695 1498 aa16.1■□□□□ 0.17
RIT1-206ENST00000609492 ZCCHC6Q5VYS8 1495 aaKnown RBP16.09■□□□□ 0.17
RIT1-206ENST00000609492 OSCARQ8IYS5 282 aa16.05■□□□□ 0.16
RIT1-206ENST00000609492 ILDR1Q86SU0 546 aaPredicted RBP15.99■□□□□ 0.15
RIT1-206ENST00000609492 TRHP20396 242 aaPredicted RBP15.98■□□□□ 0.15
RIT1-206ENST00000609492 LAMC3Q9Y6N6 1575 aa15.96■□□□□ 0.15
RIT1-206ENST00000609492 ARHGEF11O15085 1522 aa15.94■□□□□ 0.14
RIT1-206ENST00000609492 HMGXB3Q12766 1538 aa15.92■□□□□ 0.14
RIT1-206ENST00000609492 ATAD2BQ9ULI0 1458 aa15.91■□□□□ 0.14
RIT1-206ENST00000609492 WDR62O43379 1518 aa15.88■□□□□ 0.13
RIT1-206ENST00000609492 PDS5BQ9NTI5 1447 aa15.84■□□□□ 0.13
RIT1-206ENST00000609492 MRC2Q9UBG0 1479 aa15.84■□□□□ 0.13
RIT1-206ENST00000609492 CYB5RLQ6IPT4 315 aa15.8■□□□□ 0.12
RIT1-206ENST00000609492 ARAP1Q96P48 1450 aa15.71■□□□□ 0.1
RIT1-206ENST00000609492 BAZ1BQ9UIG0 1483 aaKnown RBP15.69■□□□□ 0.1
RIT1-206ENST00000609492 SMARCA4P51532 1647 aa15.65■□□□□ 0.1
RIT1-206ENST00000609492 CADPSQ9ULU8 1353 aa15.53■□□□□ 0.08
RIT1-206ENST00000609492 CEP164Q9UPV0 1460 aa15.52■□□□□ 0.08
RIT1-206ENST00000609492 PEG3Q9GZU2 1588 aa15.49■□□□□ 0.07
RIT1-206ENST00000609492 CHD1O14646 1710 aa15.44■□□□□ 0.06
RIT1-206ENST00000609492 ZNF608Q9ULD9 1512 aaPredicted RBP15.42■□□□□ 0.06
RIT1-206ENST00000609492 FANCD2Q9BXW9 1451 aa15.41■□□□□ 0.06
RIT1-206ENST00000609492 URB2Q14146 1524 aaKnown RBP15.41■□□□□ 0.06
RIT1-206ENST00000609492 RSF1Q96T23 1441 aaPredicted RBP15.41■□□□□ 0.06
RIT1-206ENST00000609492 EIF4G3O43432 1585 aaKnown RBP15.29■□□□□ 0.04
RIT1-206ENST00000609492 KDM4FA0A1W2PPD8 638 aa15.26■□□□□ 0.03
RIT1-206ENST00000609492 IFT140Q96RY7 1462 aa15.24■□□□□ 0.03
RIT1-206ENST00000609492 MROH2BQ7Z745 1585 aa15.19■□□□□ 0.02
RIT1-206ENST00000609492 CLASP1Q7Z460 1538 aa15.18■□□□□ 0.02
RIT1-206ENST00000609492 KIF13AQ9H1H9 1805 aa15.15■□□□□ 0.02
RIT1-206ENST00000609492 CFTRP13569 1480 aa15.15■□□□□ 0.02
RIT1-206ENST00000609492 ERCC6L2Q5T890 1561 aa15.15■□□□□ 0.02
RIT1-206ENST00000609492 FBLN2P98095 1184 aa15.14■□□□□ 0.01
RIT1-206ENST00000609492 LMTK3Q96Q04 1460 aa15.11■□□□□ 0.01
RIT1-206ENST00000609492 HECW2Q9P2P5 1572 aa15.1■□□□□ 0.01
RIT1-206ENST00000609492 AQRO60306 1485 aaKnown RBP eCLIP15.08■□□□□ 0.015e-6■■□□□ 14.3
RIT1-206ENST00000609492 FBXO41Q8TF61 875 aa15.08■□□□□ 0
RIT1-206ENST00000609492 GAPVD1Q14C86 1478 aa15.06■□□□□ 0
RIT1-206ENST00000609492 PRDM2Q13029 1718 aa15.02□□□□□ -0.01
RIT1-206ENST00000609492 TARBP1Q13395 1621 aaKnown RBP15.01□□□□□ -0.01
RIT1-206ENST00000609492 SYNJ1O43426 1573 aa15.01□□□□□ -0.01
RIT1-206ENST00000609492 TOPBP1Q92547 1522 aa15.01□□□□□ -0.01
RIT1-206ENST00000609492 WIZO95785 1651 aa15□□□□□ -0.01
RIT1-206ENST00000609492 SOCS7O14512 581 aa14.99□□□□□ -0.01
RIT1-206ENST00000609492 ILDR2Q71H61 639 aa14.96□□□□□ -0.01
RIT1-206ENST00000609492 KDM6BO15054 1643 aa14.93□□□□□ -0.02
RIT1-206ENST00000609492 SNAPC4Q5SXM2 1469 aa14.9□□□□□ -0.02
RIT1-206ENST00000609492 ADGRL1O94910 1474 aa14.89□□□□□ -0.03
RIT1-206ENST00000609492 SYNJ2O15056 1496 aa14.85□□□□□ -0.03
RIT1-206ENST00000609492 DNMBPQ6XZF7 1577 aa14.85□□□□□ -0.03
RIT1-206ENST00000609492 CHMP7Q8WUX9 453 aaPredicted RBP14.81□□□□□ -0.04
RIT1-206ENST00000609492 ABCC8Q09428 1581 aa14.79□□□□□ -0.04
RIT1-206ENST00000609492 POLA1P09884 1462 aaPredicted RBP14.78□□□□□ -0.04
RIT1-206ENST00000609492 ABCC10Q5T3U5 1492 aa14.78□□□□□ -0.04
RIT1-206ENST00000609492 TDRD9Q8NDG6 1382 aaKnown RBP14.78□□□□□ -0.04
RIT1-206ENST00000609492 DIP2BQ9P265 1576 aa14.77□□□□□ -0.04
RIT1-206ENST00000609492 MAGI1Q96QZ7 1491 aaPredicted RBP14.77□□□□□ -0.04
RIT1-206ENST00000609492 TSPOAP1O95153 1857 aa14.77□□□□□ -0.05
RIT1-206ENST00000609492 FAM69CQ0P6D2 419 aa14.76□□□□□ -0.05
RIT1-206ENST00000609492 RAD54L2Q9Y4B4 1467 aa14.76□□□□□ -0.05
RIT1-206ENST00000609492 DISP3Q9P2K9 1392 aa14.75□□□□□ -0.05
RIT1-206ENST00000609492 CEP170Q5SW79 1584 aa14.7□□□□□ -0.06
RIT1-206ENST00000609492 WDR97A6NE52 1622 aa14.7□□□□□ -0.06
RIT1-206ENST00000609492 TOP2AP11388 1531 aaKnown RBP14.66□□□□□ -0.06
RIT1-206ENST00000609492 MAPKBP1O60336 1514 aa14.65□□□□□ -0.06
RIT1-206ENST00000609492 GRIN2BQ13224 1484 aa14.64□□□□□ -0.07
RIT1-206ENST00000609492 PBRM1Q86U86 1689 aa14.64□□□□□ -0.07
RIT1-206ENST00000609492 SOGA1O94964 1423 aa14.63□□□□□ -0.07
RIT1-206ENST00000609492 SHROOM2Q13796 1616 aa14.62□□□□□ -0.07
RIT1-206ENST00000609492 SPATA31D1Q6ZQQ2 1576 aa14.6□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms