RNA–Protein interactions for RNA: ENST00000609252.1

LINC00658-207, long intergenic non-protein coding RNA 658, humanhuman

TSL 5

Gene LINC00658, Length 638 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00658-207ENST00000609252 NISCHQ9Y2I1 1504 aa19.32■□□□□ 0.68
LINC00658-207ENST00000609252 CCDC180Q9P1Z9 1646 aa17.19■□□□□ 0.34
LINC00658-207ENST00000609252 ABCC9O60706 1549 aa16.75■□□□□ 0.27
LINC00658-207ENST00000609252 DCAF8L2P0C7V8 631 aa16.23■□□□□ 0.19
LINC00658-207ENST00000609252 RB1CC1Q8TDY2 1594 aa16.13■□□□□ 0.17
LINC00658-207ENST00000609252 ZCCHC6Q5VYS8 1495 aaKnown RBP16.1■□□□□ 0.17
LINC00658-207ENST00000609252 NACADO15069 1562 aa16.1■□□□□ 0.17
LINC00658-207ENST00000609252 MYO15BQ96JP2 1530 aa15.96■□□□□ 0.15
LINC00658-207ENST00000609252 DCAF1Q9Y4B6 1507 aa15.95■□□□□ 0.14
LINC00658-207ENST00000609252 UNC13AQ9UPW8 1703 aa15.84■□□□□ 0.13
LINC00658-207ENST00000609252 SCRIBQ14160 1630 aa15.73■□□□□ 0.11
LINC00658-207ENST00000609252 PABPN1Q86U42 306 aaKnown RBP eCLIP15.66■□□□□ 0.1
LINC00658-207ENST00000609252 BICRAQ9NZM4 1560 aa15.61■□□□□ 0.09
LINC00658-207ENST00000609252 SHROOM4Q9ULL8 1493 aa15.41■□□□□ 0.06
LINC00658-207ENST00000609252 DNAJC5BQ9UF47 199 aa15.22■□□□□ 0.03
LINC00658-207ENST00000609252 EIF4G1Q04637 1599 aaKnown RBP15.21■□□□□ 0.03
LINC00658-207ENST00000609252 CC2D2AQ9P2K1 1620 aa15.15■□□□□ 0.02
LINC00658-207ENST00000609252 CECR2Q9BXF3 1484 aa15.05■□□□□ -0
LINC00658-207ENST00000609252 SMARCA4P51532 1647 aa15.01□□□□□ -0.01
LINC00658-207ENST00000609252 BAZ1AQ9NRL2 1556 aaPredicted RBP14.99□□□□□ -0.01
LINC00658-207ENST00000609252 MROH2BQ7Z745 1585 aa14.91□□□□□ -0.02
LINC00658-207ENST00000609252 SMARCA2P51531 1590 aa14.89□□□□□ -0.03
LINC00658-207ENST00000609252 ATAD2BQ9ULI0 1458 aa14.86□□□□□ -0.03
LINC00658-207ENST00000609252 NCAPD3P42695 1498 aa14.82□□□□□ -0.04
LINC00658-207ENST00000609252 WIZO95785 1651 aa14.81□□□□□ -0.04
LINC00658-207ENST00000609252 PEG3Q9GZU2 1588 aa14.8□□□□□ -0.04
LINC00658-207ENST00000609252 BAZ1BQ9UIG0 1483 aaKnown RBP14.79□□□□□ -0.04
LINC00658-207ENST00000609252 HMGXB3Q12766 1538 aa14.78□□□□□ -0.04
LINC00658-207ENST00000609252 RSF1Q96T23 1441 aaPredicted RBP14.74□□□□□ -0.05
LINC00658-207ENST00000609252 TOP2AP11388 1531 aaKnown RBP14.61□□□□□ -0.07
LINC00658-207ENST00000609252 SUPT5HO00267 1087 aaKnown RBP14.54□□□□□ -0.08
LINC00658-207ENST00000609252 NESP48681 1621 aa14.5□□□□□ -0.09
LINC00658-207ENST00000609252 LAMC3Q9Y6N6 1575 aa14.47□□□□□ -0.09
LINC00658-207ENST00000609252 ERCC6Q03468 1493 aa14.45□□□□□ -0.1
LINC00658-207ENST00000609252 CCDC88BA6NC98 1476 aa14.43□□□□□ -0.1
LINC00658-207ENST00000609252 CADPSQ9ULU8 1353 aa14.41□□□□□ -0.1
LINC00658-207ENST00000609252 KIF21AQ7Z4S6 1674 aa14.39□□□□□ -0.11
LINC00658-207ENST00000609252 PRDM2Q13029 1718 aa14.37□□□□□ -0.11
LINC00658-207ENST00000609252 PDS5BQ9NTI5 1447 aa14.36□□□□□ -0.11
LINC00658-207ENST00000609252 CFTRP13569 1480 aa14.33□□□□□ -0.12
LINC00658-207ENST00000609252 FANCD2Q9BXW9 1451 aa14.28□□□□□ -0.12
LINC00658-207ENST00000609252 CEP164Q9UPV0 1460 aa14.27□□□□□ -0.12
LINC00658-207ENST00000609252 THOC2Q8NI27 1593 aaKnown RBP14.26□□□□□ -0.13
LINC00658-207ENST00000609252 MRC2Q9UBG0 1479 aa14.21□□□□□ -0.13
LINC00658-207ENST00000609252 CUX2O14529 1486 aa14.19□□□□□ -0.14
LINC00658-207ENST00000609252 WDR62O43379 1518 aa14.15□□□□□ -0.14
LINC00658-207ENST00000609252 URB2Q14146 1524 aaKnown RBP14.12□□□□□ -0.15
LINC00658-207ENST00000609252 TOPBP1Q92547 1522 aa14.06□□□□□ -0.16
LINC00658-207ENST00000609252 DNMBPQ6XZF7 1577 aa14.06□□□□□ -0.16
LINC00658-207ENST00000609252 ABCC8Q09428 1581 aa14.05□□□□□ -0.16
LINC00658-207ENST00000609252 CUX1P39880 1505 aa13.99□□□□□ -0.17
LINC00658-207ENST00000609252 IFT140Q96RY7 1462 aa13.94□□□□□ -0.18
LINC00658-207ENST00000609252 POLA1P09884 1462 aaPredicted RBP13.93□□□□□ -0.18
LINC00658-207ENST00000609252 FGD5Q6ZNL6 1462 aa13.93□□□□□ -0.18
LINC00658-207ENST00000609252 WRNQ14191 1432 aaPredicted RBP eCLIP13.92□□□□□ -0.18
LINC00658-207ENST00000609252 BIVM-ERCC5R4GMW8 1640 aa13.91□□□□□ -0.18
LINC00658-207ENST00000609252 SYNJ1O43426 1573 aa13.91□□□□□ -0.18
LINC00658-207ENST00000609252 TARBP1Q13395 1621 aaKnown RBP13.9□□□□□ -0.18
LINC00658-207ENST00000609252 TOP2BQ02880 1626 aa13.9□□□□□ -0.19
LINC00658-207ENST00000609252 SOGA1O94964 1423 aa13.9□□□□□ -0.19
LINC00658-207ENST00000609252 RAD54L2Q9Y4B4 1467 aa13.89□□□□□ -0.19
LINC00658-207ENST00000609252 ZNF608Q9ULD9 1512 aaPredicted RBP13.88□□□□□ -0.19
LINC00658-207ENST00000609252 EIF4G3O43432 1585 aaKnown RBP13.87□□□□□ -0.19
LINC00658-207ENST00000609252 WDR97A6NE52 1622 aa13.83□□□□□ -0.2
LINC00658-207ENST00000609252 AQRO60306 1485 aaKnown RBP eCLIP13.81□□□□□ -0.2
LINC00658-207ENST00000609252 TDRD9Q8NDG6 1382 aaKnown RBP13.81□□□□□ -0.2
LINC00658-207ENST00000609252 PBRM1Q86U86 1689 aa13.79□□□□□ -0.2
LINC00658-207ENST00000609252 ABCA10Q8WWZ4 1543 aa13.77□□□□□ -0.21
LINC00658-207ENST00000609252 GAPVD1Q14C86 1478 aa13.74□□□□□ -0.21
LINC00658-207ENST00000609252 ABCA5Q8WWZ7 1642 aa13.74□□□□□ -0.21
LINC00658-207ENST00000609252 CHD1O14646 1710 aa13.73□□□□□ -0.21
LINC00658-207ENST00000609252 GRIN2BQ13224 1484 aa13.72□□□□□ -0.21
LINC00658-207ENST00000609252 FBLN2P98095 1184 aa13.71□□□□□ -0.21
LINC00658-207ENST00000609252 SNAPC4Q5SXM2 1469 aa13.71□□□□□ -0.21
LINC00658-207ENST00000609252 TRIM41Q8WV44 630 aa13.7□□□□□ -0.22
LINC00658-207ENST00000609252 MAGI1Q96QZ7 1491 aaPredicted RBP13.67□□□□□ -0.22
LINC00658-207ENST00000609252 DNAJC5Q9H3Z4 198 aa13.65□□□□□ -0.22
LINC00658-207ENST00000609252 OSCARQ8IYS5 282 aa13.64□□□□□ -0.23
LINC00658-207ENST00000609252 CHMP7Q8WUX9 453 aaPredicted RBP13.64□□□□□ -0.23
LINC00658-207ENST00000609252 KIF27Q86VH2 1401 aa13.64□□□□□ -0.23
LINC00658-207ENST00000609252 ERICH3Q5RHP9 1530 aa13.62□□□□□ -0.23
LINC00658-207ENST00000609252 ADAMTS12P58397 1594 aa13.62□□□□□ -0.23
LINC00658-207ENST00000609252 SYNJ2O15056 1496 aa13.61□□□□□ -0.23
LINC00658-207ENST00000609252 CUL7Q14999 1698 aa13.56□□□□□ -0.24
LINC00658-207ENST00000609252 FHAD1B1AJZ9 1412 aa13.56□□□□□ -0.24
LINC00658-207ENST00000609252 CHIC1Q5VXU3 224 aa13.55□□□□□ -0.24
LINC00658-207ENST00000609252 GRIN2AQ12879 1464 aa13.55□□□□□ -0.24
LINC00658-207ENST00000609252 RUSC2Q8N2Y8 1516 aa13.54□□□□□ -0.24
LINC00658-207ENST00000609252 IGF1RP08069 1367 aa13.53□□□□□ -0.24
LINC00658-207ENST00000609252 CEP170Q5SW79 1584 aa13.49□□□□□ -0.25
LINC00658-207ENST00000609252 CLASP1Q7Z460 1538 aa13.49□□□□□ -0.25
LINC00658-207ENST00000609252 CARMIL1Q5VZK9 1371 aa13.48□□□□□ -0.25
LINC00658-207ENST00000609252 FAM9AQ8IZU1 332 aaPredicted RBP13.47□□□□□ -0.25
LINC00658-207ENST00000609252 RIMBP3CA6NJZ7 1639 aa13.46□□□□□ -0.26
LINC00658-207ENST00000609252 RIMBP3BA6NNM3 1639 aa13.46□□□□□ -0.26
LINC00658-207ENST00000609252 RIMBP3Q9UFD9 1639 aa13.46□□□□□ -0.26
LINC00658-207ENST00000609252 NUP160Q12769 1436 aa13.44□□□□□ -0.26
LINC00658-207ENST00000609252 ARHGEF11O15085 1522 aa13.43□□□□□ -0.26
LINC00658-207ENST00000609252 RAPGEF2Q9Y4G8 1499 aa13.42□□□□□ -0.26
LINC00658-207ENST00000609252 EEA1Q15075 1411 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 149.6 ms