RNA–Protein interactions for RNA: ENST00000608713.1

POLR2F-214, Transcript of RNA polymerase II subunit F, humanhuman

Gene POLR2F, Length 1,612 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2F-214ENST00000608713 NISCHQ9Y2I1 1504 aa40.18■■■■■ 4.02
POLR2F-214ENST00000608713 CCDC180Q9P1Z9 1646 aa35.34■■■■□ 3.25
POLR2F-214ENST00000608713 ABCC9O60706 1549 aa34.21■■■■□ 3.07
POLR2F-214ENST00000608713 DCAF8L2P0C7V8 631 aa33.58■■■□□ 2.97
POLR2F-214ENST00000608713 ZCCHC6Q5VYS8 1495 aaKnown RBP33.58■■■□□ 2.97
POLR2F-214ENST00000608713 DCAF1Q9Y4B6 1507 aa33.19■■■□□ 2.9
POLR2F-214ENST00000608713 NACADO15069 1562 aa33.14■■■□□ 2.9
POLR2F-214ENST00000608713 MYO15BQ96JP2 1530 aa33.08■■■□□ 2.89
POLR2F-214ENST00000608713 RB1CC1Q8TDY2 1594 aa33.05■■■□□ 2.88
POLR2F-214ENST00000608713 SCRIBQ14160 1630 aa32.46■■■□□ 2.79
POLR2F-214ENST00000608713 SHROOM4Q9ULL8 1493 aa32.33■■■□□ 2.77
POLR2F-214ENST00000608713 UNC13AQ9UPW8 1703 aa32.25■■■□□ 2.75
POLR2F-214ENST00000608713 PABPN1Q86U42 306 aaKnown RBP eCLIP32.15■■■□□ 2.74
POLR2F-214ENST00000608713 BICRAQ9NZM4 1560 aa32.03■■■□□ 2.72
POLR2F-214ENST00000608713 CECR2Q9BXF3 1484 aa31.31■■■□□ 2.6
POLR2F-214ENST00000608713 EIF4G1Q04637 1599 aaKnown RBP31.16■■■□□ 2.58
POLR2F-214ENST00000608713 BAZ1AQ9NRL2 1556 aaPredicted RBP31.09■■■□□ 2.57
POLR2F-214ENST00000608713 SMARCA4P51532 1647 aa31.03■■■□□ 2.56
POLR2F-214ENST00000608713 MROH2BQ7Z745 1585 aa31.02■■■□□ 2.56
POLR2F-214ENST00000608713 CC2D2AQ9P2K1 1620 aa30.89■■■□□ 2.54
POLR2F-214ENST00000608713 RSF1Q96T23 1441 aaPredicted RBP30.89■■■□□ 2.54
POLR2F-214ENST00000608713 DNAJC5BQ9UF47 199 aa30.87■■■□□ 2.53
POLR2F-214ENST00000608713 ATAD2BQ9ULI0 1458 aa30.75■■■□□ 2.51
POLR2F-214ENST00000608713 SUPT5HO00267 1087 aaKnown RBP30.74■■■□□ 2.51
POLR2F-214ENST00000608713 WIZO95785 1651 aa30.7■■■□□ 2.51
POLR2F-214ENST00000608713 SMARCA2P51531 1590 aa30.7■■■□□ 2.5
POLR2F-214ENST00000608713 PEG3Q9GZU2 1588 aa30.65■■■□□ 2.5
POLR2F-214ENST00000608713 NCAPD3P42695 1498 aa30.6■■■□□ 2.49
POLR2F-214ENST00000608713 BAZ1BQ9UIG0 1483 aaKnown RBP30.55■■■□□ 2.48
POLR2F-214ENST00000608713 HMGXB3Q12766 1538 aa30.47■■■□□ 2.47
POLR2F-214ENST00000608713 TOP2AP11388 1531 aaKnown RBP30.38■■■□□ 2.45
POLR2F-214ENST00000608713 CCDC88BA6NC98 1476 aa30.09■■■□□ 2.41
POLR2F-214ENST00000608713 CADPSQ9ULU8 1353 aa29.8■■■□□ 2.36
POLR2F-214ENST00000608713 NESP48681 1621 aa29.77■■■□□ 2.36
POLR2F-214ENST00000608713 CFTRP13569 1480 aa29.71■■■□□ 2.35
POLR2F-214ENST00000608713 LAMC3Q9Y6N6 1575 aa29.67■■■□□ 2.34
POLR2F-214ENST00000608713 PDS5BQ9NTI5 1447 aa29.53■■■□□ 2.32
POLR2F-214ENST00000608713 FANCD2Q9BXW9 1451 aa29.46■■■□□ 2.31
POLR2F-214ENST00000608713 ERCC6Q03468 1493 aa29.44■■■□□ 2.3
POLR2F-214ENST00000608713 PRDM2Q13029 1718 aa29.41■■■□□ 2.3
POLR2F-214ENST00000608713 CEP164Q9UPV0 1460 aa29.35■■■□□ 2.29
POLR2F-214ENST00000608713 KIF21AQ7Z4S6 1674 aa29.35■■■□□ 2.29
POLR2F-214ENST00000608713 ABCC8Q09428 1581 aa29.19■■■□□ 2.26
POLR2F-214ENST00000608713 MRC2Q9UBG0 1479 aa29.17■■■□□ 2.26
POLR2F-214ENST00000608713 WRNQ14191 1432 aaPredicted RBP eCLIP29.11■■■□□ 2.25
POLR2F-214ENST00000608713 URB2Q14146 1524 aaKnown RBP29.11■■■□□ 2.25
POLR2F-214ENST00000608713 THOC2Q8NI27 1593 aaKnown RBP29.08■■■□□ 2.25
POLR2F-214ENST00000608713 CUX1P39880 1505 aa29.05■■■□□ 2.24
POLR2F-214ENST00000608713 TOPBP1Q92547 1522 aa29.03■■■□□ 2.24
POLR2F-214ENST00000608713 DNMBPQ6XZF7 1577 aa29.03■■■□□ 2.24
POLR2F-214ENST00000608713 WDR62O43379 1518 aa29.01■■■□□ 2.24
POLR2F-214ENST00000608713 SYNJ1O43426 1573 aa28.99■■■□□ 2.23
POLR2F-214ENST00000608713 CHIC1Q5VXU3 224 aa28.97■■■□□ 2.23
POLR2F-214ENST00000608713 TRIM41Q8WV44 630 aa28.96■■■□□ 2.23
POLR2F-214ENST00000608713 TOP2BQ02880 1626 aa28.92■■■□□ 2.22
POLR2F-214ENST00000608713 BIVM-ERCC5R4GMW8 1640 aa28.89■■■□□ 2.21
POLR2F-214ENST00000608713 FGD5Q6ZNL6 1462 aa28.87■■■□□ 2.21
POLR2F-214ENST00000608713 POLA1P09884 1462 aaPredicted RBP28.84■■■□□ 2.21
POLR2F-214ENST00000608713 CUX2O14529 1486 aa28.8■■■□□ 2.2
POLR2F-214ENST00000608713 SOGA1O94964 1423 aa28.78■■■□□ 2.2
POLR2F-214ENST00000608713 RAD54L2Q9Y4B4 1467 aa28.76■■■□□ 2.2
POLR2F-214ENST00000608713 IFT140Q96RY7 1462 aa28.7■■■□□ 2.18
POLR2F-214ENST00000608713 TARBP1Q13395 1621 aaKnown RBP28.63■■■□□ 2.17
POLR2F-214ENST00000608713 ABCA10Q8WWZ4 1543 aa28.58■■■□□ 2.17
POLR2F-214ENST00000608713 TDRD9Q8NDG6 1382 aaKnown RBP28.57■■■□□ 2.16
POLR2F-214ENST00000608713 ZNF608Q9ULD9 1512 aaPredicted RBP28.57■■■□□ 2.16
POLR2F-214ENST00000608713 AQRO60306 1485 aaKnown RBP eCLIP28.51■■■□□ 2.15
POLR2F-214ENST00000608713 WDR97A6NE52 1622 aa28.5■■■□□ 2.15
POLR2F-214ENST00000608713 KIF27Q86VH2 1401 aa28.46■■■□□ 2.15
POLR2F-214ENST00000608713 RUSC2Q8N2Y8 1516 aa28.44■■■□□ 2.14
POLR2F-214ENST00000608713 GAPVD1Q14C86 1478 aa28.43■■■□□ 2.14
POLR2F-214ENST00000608713 FAM9AQ8IZU1 332 aaPredicted RBP28.43■■■□□ 2.14
POLR2F-214ENST00000608713 EIF4G3O43432 1585 aaKnown RBP28.42■■■□□ 2.14
POLR2F-214ENST00000608713 ABCA5Q8WWZ7 1642 aa28.38■■■□□ 2.13
POLR2F-214ENST00000608713 GRIN2BQ13224 1484 aa28.32■■■□□ 2.12
POLR2F-214ENST00000608713 IGF1RP08069 1367 aa28.28■■■□□ 2.12
POLR2F-214ENST00000608713 EEA1Q15075 1411 aa28.28■■■□□ 2.12
POLR2F-214ENST00000608713 PBRM1Q86U86 1689 aa28.25■■■□□ 2.11
POLR2F-214ENST00000608713 CSRNP3Q8WYN3 585 aa28.25■■■□□ 2.11
POLR2F-214ENST00000608713 ERICH3Q5RHP9 1530 aa28.23■■■□□ 2.11
POLR2F-214ENST00000608713 SNAPC4Q5SXM2 1469 aa28.23■■■□□ 2.11
POLR2F-214ENST00000608713 MAGI1Q96QZ7 1491 aaPredicted RBP28.15■■■□□ 2.1
POLR2F-214ENST00000608713 FBLN2P98095 1184 aa28.15■■■□□ 2.1
POLR2F-214ENST00000608713 CARMIL1Q5VZK9 1371 aa28.14■■■□□ 2.1
POLR2F-214ENST00000608713 FHAD1B1AJZ9 1412 aa28.11■■■□□ 2.09
POLR2F-214ENST00000608713 CHMP7Q8WUX9 453 aaPredicted RBP28.1■■■□□ 2.09
POLR2F-214ENST00000608713 EHMT2Q96KQ7 1210 aa28.09■■■□□ 2.09
POLR2F-214ENST00000608713 ADAMTS12P58397 1594 aa28.09■■■□□ 2.09
POLR2F-214ENST00000608713 CUL7Q14999 1698 aa28.08■■■□□ 2.09
POLR2F-214ENST00000608713 SYNJ2O15056 1496 aa28.05■■■□□ 2.08
POLR2F-214ENST00000608713 PRXQ9BXM0 1461 aa28.03■■■□□ 2.08
POLR2F-214ENST00000608713 RAPGEF2Q9Y4G8 1499 aa28.01■■■□□ 2.07
POLR2F-214ENST00000608713 GRIN2AQ12879 1464 aa27.96■■■□□ 2.07
POLR2F-214ENST00000608713 CHD1O14646 1710 aa27.92■■■□□ 2.06
POLR2F-214ENST00000608713 KIF21BO75037 1637 aa27.91■■■□□ 2.06
POLR2F-214ENST00000608713 LOC105371045A0A1W2PR82 267 aa27.87■■■□□ 2.05
POLR2F-214ENST00000608713 GOLGA3Q08378 1498 aa27.87■■■□□ 2.05
POLR2F-214ENST00000608713 UBTFP17480 764 aaKnown RBP27.86■■■□□ 2.05
POLR2F-214ENST00000608713 OSCARQ8IYS5 282 aa27.83■■■□□ 2.05
POLR2F-214ENST00000608713 CEP170Q5SW79 1584 aa27.78■■■□□ 2.04
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms