RNA–Protein interactions for RNA: ENST00000608669.1

LINC00963-212, long intergenic non-protein coding RNA 963, humanhuman

TSL 5

Gene LINC00963, Length 531 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00963-212ENST00000608669 NISCHQ9Y2I1 1504 aa29.44■■■□□ 2.3
LINC00963-212ENST00000608669 CCDC180Q9P1Z9 1646 aa26.08■■□□□ 1.77
LINC00963-212ENST00000608669 ABCC9O60706 1549 aa25.53■■□□□ 1.68
LINC00963-212ENST00000608669 DCAF8L2P0C7V8 631 aa24.67■■□□□ 1.54
LINC00963-212ENST00000608669 ZCCHC6Q5VYS8 1495 aaKnown RBP24.58■■□□□ 1.52
LINC00963-212ENST00000608669 RB1CC1Q8TDY2 1594 aa24.46■■□□□ 1.51
LINC00963-212ENST00000608669 NACADO15069 1562 aa24.42■■□□□ 1.5
LINC00963-212ENST00000608669 DCAF1Q9Y4B6 1507 aa24.21■■□□□ 1.47
LINC00963-212ENST00000608669 MYO15BQ96JP2 1530 aa24.2■■□□□ 1.46
LINC00963-212ENST00000608669 UNC13AQ9UPW8 1703 aa24.11■■□□□ 1.45
LINC00963-212ENST00000608669 SCRIBQ14160 1630 aa24.02■■□□□ 1.44
LINC00963-212ENST00000608669 PABPN1Q86U42 306 aaKnown RBP eCLIP23.88■■□□□ 1.41
LINC00963-212ENST00000608669 BICRAQ9NZM4 1560 aa23.82■■□□□ 1.4
LINC00963-212ENST00000608669 SHROOM4Q9ULL8 1493 aa23.62■■□□□ 1.37
LINC00963-212ENST00000608669 DNAJC5BQ9UF47 199 aa23.26■■□□□ 1.31
LINC00963-212ENST00000608669 EIF4G1Q04637 1599 aaKnown RBP23.15■■□□□ 1.3
LINC00963-212ENST00000608669 CC2D2AQ9P2K1 1620 aa23.06■■□□□ 1.28
LINC00963-212ENST00000608669 CECR2Q9BXF3 1484 aa23.04■■□□□ 1.28
LINC00963-212ENST00000608669 SMARCA4P51532 1647 aa22.87■■□□□ 1.25
LINC00963-212ENST00000608669 MROH2BQ7Z745 1585 aa22.8■■□□□ 1.24
LINC00963-212ENST00000608669 BAZ1AQ9NRL2 1556 aaPredicted RBP22.78■■□□□ 1.24
LINC00963-212ENST00000608669 ATAD2BQ9ULI0 1458 aa22.65■■□□□ 1.22
LINC00963-212ENST00000608669 WIZO95785 1651 aa22.62■■□□□ 1.21
LINC00963-212ENST00000608669 SMARCA2P51531 1590 aa22.58■■□□□ 1.2
LINC00963-212ENST00000608669 PEG3Q9GZU2 1588 aa22.51■■□□□ 1.19
LINC00963-212ENST00000608669 RSF1Q96T23 1441 aaPredicted RBP22.51■■□□□ 1.19
LINC00963-212ENST00000608669 NCAPD3P42695 1498 aa22.51■■□□□ 1.19
LINC00963-212ENST00000608669 BAZ1BQ9UIG0 1483 aaKnown RBP22.49■■□□□ 1.19
LINC00963-212ENST00000608669 HMGXB3Q12766 1538 aa22.47■■□□□ 1.19
LINC00963-212ENST00000608669 TOP2AP11388 1531 aaKnown RBP22.26■■□□□ 1.15
LINC00963-212ENST00000608669 SUPT5HO00267 1087 aaKnown RBP22.2■■□□□ 1.14
LINC00963-212ENST00000608669 NESP48681 1621 aa22.17■■□□□ 1.14
LINC00963-212ENST00000608669 CCDC88BA6NC98 1476 aa22.02■■□□□ 1.12
LINC00963-212ENST00000608669 LAMC3Q9Y6N6 1575 aa21.95■■□□□ 1.1
LINC00963-212ENST00000608669 KIF21AQ7Z4S6 1674 aa21.92■■□□□ 1.1
LINC00963-212ENST00000608669 ERCC6Q03468 1493 aa21.92■■□□□ 1.1
LINC00963-212ENST00000608669 CADPSQ9ULU8 1353 aa21.9■■□□□ 1.1
LINC00963-212ENST00000608669 CFTRP13569 1480 aa21.82■■□□□ 1.08
LINC00963-212ENST00000608669 PRDM2Q13029 1718 aa21.78■■□□□ 1.08
LINC00963-212ENST00000608669 THOC2Q8NI27 1593 aaKnown RBP21.74■■□□□ 1.07
LINC00963-212ENST00000608669 PDS5BQ9NTI5 1447 aa21.74■■□□□ 1.07
LINC00963-212ENST00000608669 FANCD2Q9BXW9 1451 aa21.73■■□□□ 1.07
LINC00963-212ENST00000608669 CEP164Q9UPV0 1460 aa21.69■■□□□ 1.06
LINC00963-212ENST00000608669 MRC2Q9UBG0 1479 aa21.61■■□□□ 1.05
LINC00963-212ENST00000608669 URB2Q14146 1524 aaKnown RBP21.55■■□□□ 1.04
LINC00963-212ENST00000608669 WDR62O43379 1518 aa21.54■■□□□ 1.04
LINC00963-212ENST00000608669 CUX2O14529 1486 aa21.5■■□□□ 1.03
LINC00963-212ENST00000608669 TOPBP1Q92547 1522 aa21.42■■□□□ 1.02
LINC00963-212ENST00000608669 ABCC8Q09428 1581 aa21.41■■□□□ 1.02
LINC00963-212ENST00000608669 DNMBPQ6XZF7 1577 aa21.39■■□□□ 1.01
LINC00963-212ENST00000608669 CUX1P39880 1505 aa21.37■■□□□ 1.01
LINC00963-212ENST00000608669 SYNJ1O43426 1573 aa21.28■■□□□ 1
LINC00963-212ENST00000608669 FGD5Q6ZNL6 1462 aa21.26■□□□□ 0.99
LINC00963-212ENST00000608669 POLA1P09884 1462 aaPredicted RBP21.25■□□□□ 0.99
LINC00963-212ENST00000608669 RAD54L2Q9Y4B4 1467 aa21.24■□□□□ 0.99
LINC00963-212ENST00000608669 WRNQ14191 1432 aaPredicted RBP eCLIP21.21■□□□□ 0.99
LINC00963-212ENST00000608669 ZNF608Q9ULD9 1512 aaPredicted RBP21.21■□□□□ 0.99
LINC00963-212ENST00000608669 TARBP1Q13395 1621 aaKnown RBP21.18■□□□□ 0.98
LINC00963-212ENST00000608669 BIVM-ERCC5R4GMW8 1640 aa21.18■□□□□ 0.98
LINC00963-212ENST00000608669 TOP2BQ02880 1626 aa21.16■□□□□ 0.98
LINC00963-212ENST00000608669 IFT140Q96RY7 1462 aa21.16■□□□□ 0.98
LINC00963-212ENST00000608669 EIF4G3O43432 1585 aaKnown RBP21.14■□□□□ 0.97
LINC00963-212ENST00000608669 SOGA1O94964 1423 aa21.12■□□□□ 0.97
LINC00963-212ENST00000608669 WDR97A6NE52 1622 aa21.11■□□□□ 0.97
LINC00963-212ENST00000608669 AQRO60306 1485 aaKnown RBP eCLIP21.07■□□□□ 0.96
LINC00963-212ENST00000608669 TDRD9Q8NDG6 1382 aaKnown RBP21.06■□□□□ 0.96
LINC00963-212ENST00000608669 PBRM1Q86U86 1689 aa20.96■□□□□ 0.95
LINC00963-212ENST00000608669 ABCA10Q8WWZ4 1543 aa20.96■□□□□ 0.95
LINC00963-212ENST00000608669 ABCA5Q8WWZ7 1642 aa20.95■□□□□ 0.94
LINC00963-212ENST00000608669 GAPVD1Q14C86 1478 aa20.89■□□□□ 0.94
LINC00963-212ENST00000608669 SNAPC4Q5SXM2 1469 aa20.89■□□□□ 0.94
LINC00963-212ENST00000608669 CHD1O14646 1710 aa20.88■□□□□ 0.93
LINC00963-212ENST00000608669 GRIN2BQ13224 1484 aa20.83■□□□□ 0.93
LINC00963-212ENST00000608669 TRIM41Q8WV44 630 aa20.83■□□□□ 0.93
LINC00963-212ENST00000608669 FBLN2P98095 1184 aa20.8■□□□□ 0.92
LINC00963-212ENST00000608669 RUSC2Q8N2Y8 1516 aa20.78■□□□□ 0.92
LINC00963-212ENST00000608669 ADAMTS12P58397 1594 aa20.76■□□□□ 0.91
LINC00963-212ENST00000608669 MAGI1Q96QZ7 1491 aaPredicted RBP20.74■□□□□ 0.91
LINC00963-212ENST00000608669 CHIC1Q5VXU3 224 aa20.71■□□□□ 0.91
LINC00963-212ENST00000608669 KIF27Q86VH2 1401 aa20.7■□□□□ 0.9
LINC00963-212ENST00000608669 ERICH3Q5RHP9 1530 aa20.69■□□□□ 0.9
LINC00963-212ENST00000608669 SYNJ2O15056 1496 aa20.69■□□□□ 0.9
LINC00963-212ENST00000608669 CHMP7Q8WUX9 453 aaPredicted RBP20.65■□□□□ 0.9
LINC00963-212ENST00000608669 DNAJC5Q9H3Z4 198 aa20.64■□□□□ 0.89
LINC00963-212ENST00000608669 OSCARQ8IYS5 282 aa20.62■□□□□ 0.89
LINC00963-212ENST00000608669 GRIN2AQ12879 1464 aa20.62■□□□□ 0.89
LINC00963-212ENST00000608669 IGF1RP08069 1367 aa20.61■□□□□ 0.89
LINC00963-212ENST00000608669 FHAD1B1AJZ9 1412 aa20.61■□□□□ 0.89
LINC00963-212ENST00000608669 FAM9AQ8IZU1 332 aaPredicted RBP20.59■□□□□ 0.89
LINC00963-212ENST00000608669 CEP170Q5SW79 1584 aa20.59■□□□□ 0.89
LINC00963-212ENST00000608669 CUL7Q14999 1698 aa20.58■□□□□ 0.89
LINC00963-212ENST00000608669 CLASP1Q7Z460 1538 aa20.54■□□□□ 0.88
LINC00963-212ENST00000608669 CARMIL1Q5VZK9 1371 aa20.5■□□□□ 0.87
LINC00963-212ENST00000608669 RIMBP3CA6NJZ7 1639 aa20.46■□□□□ 0.87
LINC00963-212ENST00000608669 RIMBP3BA6NNM3 1639 aa20.46■□□□□ 0.87
LINC00963-212ENST00000608669 RIMBP3Q9UFD9 1639 aa20.46■□□□□ 0.87
LINC00963-212ENST00000608669 NUP160Q12769 1436 aa20.46■□□□□ 0.87
LINC00963-212ENST00000608669 EHMT2Q96KQ7 1210 aa20.46■□□□□ 0.87
LINC00963-212ENST00000608669 ARHGEF11O15085 1522 aa20.43■□□□□ 0.86
LINC00963-212ENST00000608669 ERCC6L2Q5T890 1561 aa20.42■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms