RNA–Protein interactions for RNA: ENST00000608431.1

LINC00649-213, long intergenic non-protein coding RNA 649, humanhuman

TSL 5

Gene LINC00649, Length 260 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00649-213ENST00000608431 AEBP2Q6ZN18 517 aaPredicted RBP16.14■□□□□ 0.17
LINC00649-213ENST00000608431 CHIC1Q5VXU3 224 aa15.94■□□□□ 0.14
LINC00649-213ENST00000608431 NISCHQ9Y2I1 1504 aa14.76□□□□□ -0.05
LINC00649-213ENST00000608431 ABCC9O60706 1549 aa14.2□□□□□ -0.14
LINC00649-213ENST00000608431 PHF23Q9BUL5 403 aaPredicted RBP14.12□□□□□ -0.15
LINC00649-213ENST00000608431 DNAJC5BQ9UF47 199 aa13.86□□□□□ -0.19
LINC00649-213ENST00000608431 CCDC180Q9P1Z9 1646 aa13.7□□□□□ -0.22
LINC00649-213ENST00000608431 SENP3Q9H4L4 574 aaPredicted RBP13.54□□□□□ -0.24
LINC00649-213ENST00000608431 DNAJC5Q9H3Z4 198 aa13.33□□□□□ -0.28
LINC00649-213ENST00000608431 RB1CC1Q8TDY2 1594 aa13.32□□□□□ -0.28
LINC00649-213ENST00000608431 UNC13AQ9UPW8 1703 aa13.09□□□□□ -0.31
LINC00649-213ENST00000608431 NACADO15069 1562 aa13.04□□□□□ -0.32
LINC00649-213ENST00000608431 PABPN1Q86U42 306 aaKnown RBP eCLIP13.03□□□□□ -0.32
LINC00649-213ENST00000608431 PLPPR3Q6T4P5 718 aa13□□□□□ -0.33
LINC00649-213ENST00000608431 BICRAQ9NZM4 1560 aa12.9□□□□□ -0.35
LINC00649-213ENST00000608431 CECR2Q9BXF3 1484 aa12.89□□□□□ -0.35
LINC00649-213ENST00000608431 CC2D2AQ9P2K1 1620 aa12.85□□□□□ -0.35
LINC00649-213ENST00000608431 SHROOM4Q9ULL8 1493 aa12.74□□□□□ -0.37
LINC00649-213ENST00000608431 DCAF8L2P0C7V8 631 aa12.69□□□□□ -0.38
LINC00649-213ENST00000608431 EIF4G1Q04637 1599 aaKnown RBP12.65□□□□□ -0.38
LINC00649-213ENST00000608431 MYO15BQ96JP2 1530 aa12.64□□□□□ -0.39
LINC00649-213ENST00000608431 FOXD1Q16676 465 aa12.61□□□□□ -0.39
LINC00649-213ENST00000608431 CUX2O14529 1486 aa12.6□□□□□ -0.39
LINC00649-213ENST00000608431 TRIM41Q8WV44 630 aa12.41□□□□□ -0.42
LINC00649-213ENST00000608431 PPP6R1Q9UPN7 881 aa12.38□□□□□ -0.43
LINC00649-213ENST00000608431 ERCC6Q03468 1493 aa12.36□□□□□ -0.43
LINC00649-213ENST00000608431 ADRA2BP18089 450 aa12.35□□□□□ -0.43
LINC00649-213ENST00000608431 SCRIBQ14160 1630 aa12.31□□□□□ -0.44
LINC00649-213ENST00000608431 DCAF1Q9Y4B6 1507 aa12.21□□□□□ -0.46
LINC00649-213ENST00000608431 THOC2Q8NI27 1593 aaKnown RBP12.09□□□□□ -0.47
LINC00649-213ENST00000608431 ZCCHC6Q5VYS8 1495 aaKnown RBP12.08□□□□□ -0.48
LINC00649-213ENST00000608431 NCAPD3P42695 1498 aa12□□□□□ -0.49
LINC00649-213ENST00000608431 NESP48681 1621 aa11.98□□□□□ -0.49
LINC00649-213ENST00000608431 BAZ1AQ9NRL2 1556 aaPredicted RBP11.95□□□□□ -0.5
LINC00649-213ENST00000608431 KIF21AQ7Z4S6 1674 aa11.94□□□□□ -0.5
LINC00649-213ENST00000608431 SMARCA2P51531 1590 aa11.92□□□□□ -0.5
LINC00649-213ENST00000608431 LAMC3Q9Y6N6 1575 aa11.92□□□□□ -0.5
LINC00649-213ENST00000608431 HMGXB3Q12766 1538 aa11.9□□□□□ -0.5
LINC00649-213ENST00000608431 PIAS4Q8N2W9 510 aaPredicted RBP11.89□□□□□ -0.51
LINC00649-213ENST00000608431 OSCARQ8IYS5 282 aa11.86□□□□□ -0.51
LINC00649-213ENST00000608431 RIMBP3CA6NJZ7 1639 aa11.84□□□□□ -0.51
LINC00649-213ENST00000608431 RIMBP3BA6NNM3 1639 aa11.84□□□□□ -0.51
LINC00649-213ENST00000608431 RIMBP3Q9UFD9 1639 aa11.84□□□□□ -0.51
LINC00649-213ENST00000608431 ATAD2BQ9ULI0 1458 aa11.83□□□□□ -0.52
LINC00649-213ENST00000608431 PDS5BQ9NTI5 1447 aa11.82□□□□□ -0.52
LINC00649-213ENST00000608431 WDR62O43379 1518 aa11.75□□□□□ -0.53
LINC00649-213ENST00000608431 MRC2Q9UBG0 1479 aa11.74□□□□□ -0.53
LINC00649-213ENST00000608431 TRHP20396 242 aaPredicted RBP11.72□□□□□ -0.53
LINC00649-213ENST00000608431 BAZ1BQ9UIG0 1483 aaKnown RBP11.71□□□□□ -0.53
LINC00649-213ENST00000608431 SMARCA4P51532 1647 aa11.71□□□□□ -0.54
LINC00649-213ENST00000608431 ARHGEF11O15085 1522 aa11.69□□□□□ -0.54
LINC00649-213ENST00000608431 PEG3Q9GZU2 1588 aa11.62□□□□□ -0.55
LINC00649-213ENST00000608431 CYB5RLQ6IPT4 315 aa11.59□□□□□ -0.55
LINC00649-213ENST00000608431 KCNA4P22459 653 aa11.58□□□□□ -0.56
LINC00649-213ENST00000608431 CADPSQ9ULU8 1353 aa11.57□□□□□ -0.56
LINC00649-213ENST00000608431 CEP164Q9UPV0 1460 aa11.57□□□□□ -0.56
LINC00649-213ENST00000608431 PPP4R3CPQ6ZMV5 832 aa11.52□□□□□ -0.57
LINC00649-213ENST00000608431 ARAP1Q96P48 1450 aa11.5□□□□□ -0.57
LINC00649-213ENST00000608431 ILDR1Q86SU0 546 aaPredicted RBP11.49□□□□□ -0.57
LINC00649-213ENST00000608431 FANCD2Q9BXW9 1451 aa11.45□□□□□ -0.58
LINC00649-213ENST00000608431 CHD1O14646 1710 aa11.44□□□□□ -0.58
LINC00649-213ENST00000608431 MSH5O43196 834 aa11.43□□□□□ -0.58
LINC00649-213ENST00000608431 RSF1Q96T23 1441 aaPredicted RBP11.43□□□□□ -0.58
LINC00649-213ENST00000608431 URB2Q14146 1524 aaKnown RBP11.39□□□□□ -0.59
LINC00649-213ENST00000608431 IFT140Q96RY7 1462 aa11.36□□□□□ -0.59
LINC00649-213ENST00000608431 PRDM2Q13029 1718 aa11.35□□□□□ -0.59
LINC00649-213ENST00000608431 EIF4G3O43432 1585 aaKnown RBP11.34□□□□□ -0.59
LINC00649-213ENST00000608431 ZNF608Q9ULD9 1512 aaPredicted RBP11.34□□□□□ -0.59
LINC00649-213ENST00000608431 MROH2BQ7Z745 1585 aa11.33□□□□□ -0.6
LINC00649-213ENST00000608431 CFTRP13569 1480 aa11.31□□□□□ -0.6
LINC00649-213ENST00000608431 FBLN2P98095 1184 aa11.23□□□□□ -0.61
LINC00649-213ENST00000608431 WIZO95785 1651 aa11.21□□□□□ -0.61
LINC00649-213ENST00000608431 CLASP1Q7Z460 1538 aa11.21□□□□□ -0.61
LINC00649-213ENST00000608431 NCBP3Q53F19 620 aaKnown RBP11.21□□□□□ -0.61
LINC00649-213ENST00000608431 SYNJ1O43426 1573 aa11.2□□□□□ -0.62
LINC00649-213ENST00000608431 KIF13AQ9H1H9 1805 aa11.19□□□□□ -0.62
LINC00649-213ENST00000608431 ABCC8Q09428 1581 aa11.17□□□□□ -0.62
LINC00649-213ENST00000608431 TOPBP1Q92547 1522 aa11.17□□□□□ -0.62
LINC00649-213ENST00000608431 TARBP1Q13395 1621 aaKnown RBP11.16□□□□□ -0.62
LINC00649-213ENST00000608431 SCAF1Q9H7N4 1312 aaKnown RBP11.15□□□□□ -0.62
LINC00649-213ENST00000608431 AQRO60306 1485 aaKnown RBP eCLIP11.15□□□□□ -0.62
LINC00649-213ENST00000608431 NPM3O75607 178 aaKnown RBP11.15□□□□□ -0.62
LINC00649-213ENST00000608431 MAPK8IP2Q13387 824 aaPredicted RBP11.14□□□□□ -0.63
LINC00649-213ENST00000608431 GAPVD1Q14C86 1478 aa11.13□□□□□ -0.63
LINC00649-213ENST00000608431 ERCC6L2Q5T890 1561 aa11.12□□□□□ -0.63
LINC00649-213ENST00000608431 CNKSR2Q8WXI2 1034 aa11.11□□□□□ -0.63
LINC00649-213ENST00000608431 DNMBPQ6XZF7 1577 aa11.11□□□□□ -0.63
LINC00649-213ENST00000608431 KDM4FA0A1W2PPD8 638 aa11.1□□□□□ -0.63
LINC00649-213ENST00000608431 WDR97A6NE52 1622 aa11.08□□□□□ -0.64
LINC00649-213ENST00000608431 CHMP7Q8WUX9 453 aaPredicted RBP11.06□□□□□ -0.64
LINC00649-213ENST00000608431 SNAPC4Q5SXM2 1469 aa11.05□□□□□ -0.64
LINC00649-213ENST00000608431 MAGI1Q96QZ7 1491 aaPredicted RBP11.05□□□□□ -0.64
LINC00649-213ENST00000608431 TOP2AP11388 1531 aaKnown RBP11.03□□□□□ -0.64
LINC00649-213ENST00000608431 KDM6BO15054 1643 aa11.02□□□□□ -0.64
LINC00649-213ENST00000608431 FBXO41Q8TF61 875 aa11.02□□□□□ -0.65
LINC00649-213ENST00000608431 SLC4A1APQ9BWU0 796 aaKnown RBP11.01□□□□□ -0.65
LINC00649-213ENST00000608431 HECW2Q9P2P5 1572 aa11.01□□□□□ -0.65
LINC00649-213ENST00000608431 SYNJ2O15056 1496 aa11□□□□□ -0.65
LINC00649-213ENST00000608431 POLA1P09884 1462 aaPredicted RBP11□□□□□ -0.65
LINC00649-213ENST00000608431 EHMT2Q96KQ7 1210 aa10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms