RNA–Protein interactions for RNA: ENST00000608107.1

ITGB5-211, Transcript of integrin subunit beta 5, humanhuman

TSL 3

Gene ITGB5, Length 548 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB5-211ENST00000608107 NISCHQ9Y2I1 1504 aa24.32■■□□□ 1.48
ITGB5-211ENST00000608107 CCDC180Q9P1Z9 1646 aa21.44■■□□□ 1.02
ITGB5-211ENST00000608107 ABCC9O60706 1549 aa20.73■□□□□ 0.91
ITGB5-211ENST00000608107 ZCCHC6Q5VYS8 1495 aaKnown RBP20.33■□□□□ 0.85
ITGB5-211ENST00000608107 DCAF8L2P0C7V8 631 aa20.24■□□□□ 0.83
ITGB5-211ENST00000608107 DCAF1Q9Y4B6 1507 aa20.08■□□□□ 0.81
ITGB5-211ENST00000608107 NACADO15069 1562 aa20.06■□□□□ 0.8
ITGB5-211ENST00000608107 RB1CC1Q8TDY2 1594 aa20.01■□□□□ 0.79
ITGB5-211ENST00000608107 MYO15BQ96JP2 1530 aa20■□□□□ 0.79
ITGB5-211ENST00000608107 UNC13AQ9UPW8 1703 aa19.69■□□□□ 0.74
ITGB5-211ENST00000608107 SCRIBQ14160 1630 aa19.67■□□□□ 0.74
ITGB5-211ENST00000608107 SHROOM4Q9ULL8 1493 aa19.54■□□□□ 0.72
ITGB5-211ENST00000608107 BICRAQ9NZM4 1560 aa19.46■□□□□ 0.71
ITGB5-211ENST00000608107 PABPN1Q86U42 306 aaKnown RBP eCLIP19.45■□□□□ 0.7
ITGB5-211ENST00000608107 CECR2Q9BXF3 1484 aa18.97■□□□□ 0.63
ITGB5-211ENST00000608107 EIF4G1Q04637 1599 aaKnown RBP18.88■□□□□ 0.61
ITGB5-211ENST00000608107 SMARCA4P51532 1647 aa18.81■□□□□ 0.6
ITGB5-211ENST00000608107 MROH2BQ7Z745 1585 aa18.8■□□□□ 0.6
ITGB5-211ENST00000608107 BAZ1AQ9NRL2 1556 aaPredicted RBP18.8■□□□□ 0.6
ITGB5-211ENST00000608107 DNAJC5BQ9UF47 199 aa18.75■□□□□ 0.59
ITGB5-211ENST00000608107 CC2D2AQ9P2K1 1620 aa18.74■□□□□ 0.59
ITGB5-211ENST00000608107 RSF1Q96T23 1441 aaPredicted RBP18.68■□□□□ 0.58
ITGB5-211ENST00000608107 WIZO95785 1651 aa18.64■□□□□ 0.57
ITGB5-211ENST00000608107 ATAD2BQ9ULI0 1458 aa18.61■□□□□ 0.57
ITGB5-211ENST00000608107 PEG3Q9GZU2 1588 aa18.58■□□□□ 0.56
ITGB5-211ENST00000608107 SMARCA2P51531 1590 aa18.56■□□□□ 0.56
ITGB5-211ENST00000608107 SUPT5HO00267 1087 aaKnown RBP18.54■□□□□ 0.56
ITGB5-211ENST00000608107 NCAPD3P42695 1498 aa18.52■□□□□ 0.55
ITGB5-211ENST00000608107 BAZ1BQ9UIG0 1483 aaKnown RBP18.46■□□□□ 0.55
ITGB5-211ENST00000608107 HMGXB3Q12766 1538 aa18.44■□□□□ 0.54
ITGB5-211ENST00000608107 TOP2AP11388 1531 aaKnown RBP18.39■□□□□ 0.53
ITGB5-211ENST00000608107 CCDC88BA6NC98 1476 aa18.2■□□□□ 0.5
ITGB5-211ENST00000608107 NESP48681 1621 aa18.06■□□□□ 0.48
ITGB5-211ENST00000608107 CADPSQ9ULU8 1353 aa18■□□□□ 0.47
ITGB5-211ENST00000608107 LAMC3Q9Y6N6 1575 aa17.97■□□□□ 0.47
ITGB5-211ENST00000608107 CFTRP13569 1480 aa17.97■□□□□ 0.47
ITGB5-211ENST00000608107 PRDM2Q13029 1718 aa17.92■□□□□ 0.46
ITGB5-211ENST00000608107 KIF21AQ7Z4S6 1674 aa17.86■□□□□ 0.45
ITGB5-211ENST00000608107 FANCD2Q9BXW9 1451 aa17.82■□□□□ 0.44
ITGB5-211ENST00000608107 PDS5BQ9NTI5 1447 aa17.81■□□□□ 0.44
ITGB5-211ENST00000608107 ERCC6Q03468 1493 aa17.77■□□□□ 0.44
ITGB5-211ENST00000608107 CEP164Q9UPV0 1460 aa17.75■□□□□ 0.43
ITGB5-211ENST00000608107 ABCC8Q09428 1581 aa17.69■□□□□ 0.42
ITGB5-211ENST00000608107 THOC2Q8NI27 1593 aaKnown RBP17.66■□□□□ 0.42
ITGB5-211ENST00000608107 URB2Q14146 1524 aaKnown RBP17.65■□□□□ 0.42
ITGB5-211ENST00000608107 MRC2Q9UBG0 1479 aa17.64■□□□□ 0.41
ITGB5-211ENST00000608107 CUX1P39880 1505 aa17.61■□□□□ 0.41
ITGB5-211ENST00000608107 TOPBP1Q92547 1522 aa17.58■□□□□ 0.41
ITGB5-211ENST00000608107 WRNQ14191 1432 aaPredicted RBP eCLIP17.58■□□□□ 0.41
ITGB5-211ENST00000608107 WDR62O43379 1518 aa17.57■□□□□ 0.4
ITGB5-211ENST00000608107 SYNJ1O43426 1573 aa17.57■□□□□ 0.4
ITGB5-211ENST00000608107 DNMBPQ6XZF7 1577 aa17.57■□□□□ 0.4
ITGB5-211ENST00000608107 BIVM-ERCC5R4GMW8 1640 aa17.52■□□□□ 0.4
ITGB5-211ENST00000608107 TOP2BQ02880 1626 aa17.51■□□□□ 0.39
ITGB5-211ENST00000608107 CHIC1Q5VXU3 224 aa17.49■□□□□ 0.39
ITGB5-211ENST00000608107 FGD5Q6ZNL6 1462 aa17.47■□□□□ 0.39
ITGB5-211ENST00000608107 POLA1P09884 1462 aaPredicted RBP17.45■□□□□ 0.38
ITGB5-211ENST00000608107 CUX2O14529 1486 aa17.44■□□□□ 0.38
ITGB5-211ENST00000608107 TRIM41Q8WV44 630 aa17.42■□□□□ 0.38
ITGB5-211ENST00000608107 RAD54L2Q9Y4B4 1467 aa17.42■□□□□ 0.38
ITGB5-211ENST00000608107 SOGA1O94964 1423 aa17.38■□□□□ 0.37
ITGB5-211ENST00000608107 TARBP1Q13395 1621 aaKnown RBP17.38■□□□□ 0.37
ITGB5-211ENST00000608107 IFT140Q96RY7 1462 aa17.34■□□□□ 0.37
ITGB5-211ENST00000608107 WDR97A6NE52 1622 aa17.32■□□□□ 0.36
ITGB5-211ENST00000608107 ZNF608Q9ULD9 1512 aaPredicted RBP17.31■□□□□ 0.36
ITGB5-211ENST00000608107 ABCA10Q8WWZ4 1543 aa17.29■□□□□ 0.36
ITGB5-211ENST00000608107 TDRD9Q8NDG6 1382 aaKnown RBP17.28■□□□□ 0.36
ITGB5-211ENST00000608107 AQRO60306 1485 aaKnown RBP eCLIP17.24■□□□□ 0.35
ITGB5-211ENST00000608107 RUSC2Q8N2Y8 1516 aa17.24■□□□□ 0.35
ITGB5-211ENST00000608107 EIF4G3O43432 1585 aaKnown RBP17.23■□□□□ 0.35
ITGB5-211ENST00000608107 ABCA5Q8WWZ7 1642 aa17.21■□□□□ 0.35
ITGB5-211ENST00000608107 GAPVD1Q14C86 1478 aa17.18■□□□□ 0.34
ITGB5-211ENST00000608107 PBRM1Q86U86 1689 aa17.17■□□□□ 0.34
ITGB5-211ENST00000608107 KIF27Q86VH2 1401 aa17.16■□□□□ 0.34
ITGB5-211ENST00000608107 FAM9AQ8IZU1 332 aaPredicted RBP17.14■□□□□ 0.33
ITGB5-211ENST00000608107 GRIN2BQ13224 1484 aa17.12■□□□□ 0.33
ITGB5-211ENST00000608107 IGF1RP08069 1367 aa17.1■□□□□ 0.33
ITGB5-211ENST00000608107 SNAPC4Q5SXM2 1469 aa17.08■□□□□ 0.32
ITGB5-211ENST00000608107 ERICH3Q5RHP9 1530 aa17.07■□□□□ 0.32
ITGB5-211ENST00000608107 EEA1Q15075 1411 aa17.04■□□□□ 0.32
ITGB5-211ENST00000608107 CSRNP3Q8WYN3 585 aa17.03■□□□□ 0.32
ITGB5-211ENST00000608107 ADAMTS12P58397 1594 aa17.02■□□□□ 0.32
ITGB5-211ENST00000608107 MAGI1Q96QZ7 1491 aaPredicted RBP17.01■□□□□ 0.31
ITGB5-211ENST00000608107 CHD1O14646 1710 aa16.99■□□□□ 0.31
ITGB5-211ENST00000608107 CUL7Q14999 1698 aa16.99■□□□□ 0.31
ITGB5-211ENST00000608107 CARMIL1Q5VZK9 1371 aa16.99■□□□□ 0.31
ITGB5-211ENST00000608107 FHAD1B1AJZ9 1412 aa16.98■□□□□ 0.31
ITGB5-211ENST00000608107 FBLN2P98095 1184 aa16.97■□□□□ 0.31
ITGB5-211ENST00000608107 SYNJ2O15056 1496 aa16.95■□□□□ 0.3
ITGB5-211ENST00000608107 PRXQ9BXM0 1461 aa16.95■□□□□ 0.3
ITGB5-211ENST00000608107 CHMP7Q8WUX9 453 aaPredicted RBP16.94■□□□□ 0.3
ITGB5-211ENST00000608107 EHMT2Q96KQ7 1210 aa16.94■□□□□ 0.3
ITGB5-211ENST00000608107 RAPGEF2Q9Y4G8 1499 aa16.92■□□□□ 0.3
ITGB5-211ENST00000608107 GRIN2AQ12879 1464 aa16.91■□□□□ 0.3
ITGB5-211ENST00000608107 KIF21BO75037 1637 aa16.89■□□□□ 0.29
ITGB5-211ENST00000608107 CEP170Q5SW79 1584 aa16.85■□□□□ 0.29
ITGB5-211ENST00000608107 LOC105371045A0A1W2PR82 267 aa16.83■□□□□ 0.28
ITGB5-211ENST00000608107 NUP160Q12769 1436 aa16.81■□□□□ 0.28
ITGB5-211ENST00000608107 GOLGA3Q08378 1498 aa16.8■□□□□ 0.28
ITGB5-211ENST00000608107 OSCARQ8IYS5 282 aa16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms