RNA–Protein interactions for RNA: ENST00000606983.5

CNN2-211, Transcript of calponin 2, humanhuman

TSL 3

Gene CNN2, Length 537 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN2-211ENST00000606983 NISCHQ9Y2I1 1504 aa26.53■■□□□ 1.84
CNN2-211ENST00000606983 CCDC180Q9P1Z9 1646 aa23.45■■□□□ 1.34
CNN2-211ENST00000606983 ABCC9O60706 1549 aa22.55■■□□□ 1.2
CNN2-211ENST00000606983 ZCCHC6Q5VYS8 1495 aaKnown RBP22.19■■□□□ 1.14
CNN2-211ENST00000606983 DCAF8L2P0C7V8 631 aa22.03■■□□□ 1.12
CNN2-211ENST00000606983 DCAF1Q9Y4B6 1507 aa22.01■■□□□ 1.11
CNN2-211ENST00000606983 NACADO15069 1562 aa21.98■■□□□ 1.11
CNN2-211ENST00000606983 MYO15BQ96JP2 1530 aa21.97■■□□□ 1.11
CNN2-211ENST00000606983 RB1CC1Q8TDY2 1594 aa21.91■■□□□ 1.1
CNN2-211ENST00000606983 SCRIBQ14160 1630 aa21.39■■□□□ 1.01
CNN2-211ENST00000606983 UNC13AQ9UPW8 1703 aa21.27■■□□□ 1
CNN2-211ENST00000606983 SHROOM4Q9ULL8 1493 aa21.15■□□□□ 0.98
CNN2-211ENST00000606983 BICRAQ9NZM4 1560 aa21.13■□□□□ 0.97
CNN2-211ENST00000606983 PABPN1Q86U42 306 aaKnown RBP eCLIP21.11■□□□□ 0.97
CNN2-211ENST00000606983 EIF4G1Q04637 1599 aaKnown RBP20.59■□□□□ 0.89
CNN2-211ENST00000606983 BAZ1AQ9NRL2 1556 aaPredicted RBP20.59■□□□□ 0.89
CNN2-211ENST00000606983 CECR2Q9BXF3 1484 aa20.56■□□□□ 0.88
CNN2-211ENST00000606983 SMARCA4P51532 1647 aa20.49■□□□□ 0.87
CNN2-211ENST00000606983 MROH2BQ7Z745 1585 aa20.42■□□□□ 0.86
CNN2-211ENST00000606983 CC2D2AQ9P2K1 1620 aa20.41■□□□□ 0.86
CNN2-211ENST00000606983 SMARCA2P51531 1590 aa20.35■□□□□ 0.85
CNN2-211ENST00000606983 RSF1Q96T23 1441 aaPredicted RBP20.33■□□□□ 0.84
CNN2-211ENST00000606983 PEG3Q9GZU2 1588 aa20.31■□□□□ 0.84
CNN2-211ENST00000606983 ATAD2BQ9ULI0 1458 aa20.3■□□□□ 0.84
CNN2-211ENST00000606983 NCAPD3P42695 1498 aa20.24■□□□□ 0.83
CNN2-211ENST00000606983 DNAJC5BQ9UF47 199 aa20.24■□□□□ 0.83
CNN2-211ENST00000606983 WIZO95785 1651 aa20.2■□□□□ 0.82
CNN2-211ENST00000606983 HMGXB3Q12766 1538 aa20.2■□□□□ 0.82
CNN2-211ENST00000606983 BAZ1BQ9UIG0 1483 aaKnown RBP20.19■□□□□ 0.82
CNN2-211ENST00000606983 SUPT5HO00267 1087 aaKnown RBP20.12■□□□□ 0.81
CNN2-211ENST00000606983 TOP2AP11388 1531 aaKnown RBP20.08■□□□□ 0.81
CNN2-211ENST00000606983 CCDC88BA6NC98 1476 aa19.8■□□□□ 0.76
CNN2-211ENST00000606983 LAMC3Q9Y6N6 1575 aa19.68■□□□□ 0.74
CNN2-211ENST00000606983 CADPSQ9ULU8 1353 aa19.68■□□□□ 0.74
CNN2-211ENST00000606983 CFTRP13569 1480 aa19.64■□□□□ 0.73
CNN2-211ENST00000606983 NESP48681 1621 aa19.58■□□□□ 0.72
CNN2-211ENST00000606983 PDS5BQ9NTI5 1447 aa19.56■□□□□ 0.72
CNN2-211ENST00000606983 PRDM2Q13029 1718 aa19.5■□□□□ 0.71
CNN2-211ENST00000606983 ERCC6Q03468 1493 aa19.48■□□□□ 0.71
CNN2-211ENST00000606983 FANCD2Q9BXW9 1451 aa19.46■□□□□ 0.71
CNN2-211ENST00000606983 CEP164Q9UPV0 1460 aa19.43■□□□□ 0.7
CNN2-211ENST00000606983 KIF21AQ7Z4S6 1674 aa19.36■□□□□ 0.69
CNN2-211ENST00000606983 MRC2Q9UBG0 1479 aa19.31■□□□□ 0.68
CNN2-211ENST00000606983 ABCC8Q09428 1581 aa19.27■□□□□ 0.68
CNN2-211ENST00000606983 THOC2Q8NI27 1593 aaKnown RBP19.23■□□□□ 0.67
CNN2-211ENST00000606983 WDR62O43379 1518 aa19.21■□□□□ 0.67
CNN2-211ENST00000606983 WRNQ14191 1432 aaPredicted RBP eCLIP19.21■□□□□ 0.67
CNN2-211ENST00000606983 DNMBPQ6XZF7 1577 aa19.2■□□□□ 0.66
CNN2-211ENST00000606983 URB2Q14146 1524 aaKnown RBP19.2■□□□□ 0.66
CNN2-211ENST00000606983 TOPBP1Q92547 1522 aa19.17■□□□□ 0.66
CNN2-211ENST00000606983 CUX1P39880 1505 aa19.14■□□□□ 0.65
CNN2-211ENST00000606983 CUX2O14529 1486 aa19.13■□□□□ 0.65
CNN2-211ENST00000606983 TOP2BQ02880 1626 aa19.11■□□□□ 0.65
CNN2-211ENST00000606983 BIVM-ERCC5R4GMW8 1640 aa19.09■□□□□ 0.65
CNN2-211ENST00000606983 SYNJ1O43426 1573 aa19.08■□□□□ 0.65
CNN2-211ENST00000606983 FGD5Q6ZNL6 1462 aa19.05■□□□□ 0.64
CNN2-211ENST00000606983 TRIM41Q8WV44 630 aa19.04■□□□□ 0.64
CNN2-211ENST00000606983 POLA1P09884 1462 aaPredicted RBP19.03■□□□□ 0.64
CNN2-211ENST00000606983 IFT140Q96RY7 1462 aa19■□□□□ 0.63
CNN2-211ENST00000606983 SOGA1O94964 1423 aa18.99■□□□□ 0.63
CNN2-211ENST00000606983 CHIC1Q5VXU3 224 aa18.96■□□□□ 0.63
CNN2-211ENST00000606983 RAD54L2Q9Y4B4 1467 aa18.91■□□□□ 0.62
CNN2-211ENST00000606983 TARBP1Q13395 1621 aaKnown RBP18.9■□□□□ 0.62
CNN2-211ENST00000606983 ABCA10Q8WWZ4 1543 aa18.9■□□□□ 0.62
CNN2-211ENST00000606983 WDR97A6NE52 1622 aa18.88■□□□□ 0.61
CNN2-211ENST00000606983 KIF27Q86VH2 1401 aa18.82■□□□□ 0.6
CNN2-211ENST00000606983 TDRD9Q8NDG6 1382 aaKnown RBP18.8■□□□□ 0.6
CNN2-211ENST00000606983 ZNF608Q9ULD9 1512 aaPredicted RBP18.79■□□□□ 0.6
CNN2-211ENST00000606983 EIF4G3O43432 1585 aaKnown RBP18.79■□□□□ 0.6
CNN2-211ENST00000606983 GAPVD1Q14C86 1478 aa18.77■□□□□ 0.6
CNN2-211ENST00000606983 ABCA5Q8WWZ7 1642 aa18.77■□□□□ 0.6
CNN2-211ENST00000606983 AQRO60306 1485 aaKnown RBP eCLIP18.76■□□□□ 0.591e-6■■■□□ 16.4
CNN2-211ENST00000606983 GRIN2BQ13224 1484 aa18.74■□□□□ 0.59
CNN2-211ENST00000606983 EEA1Q15075 1411 aa18.74■□□□□ 0.59
CNN2-211ENST00000606983 ERICH3Q5RHP9 1530 aa18.69■□□□□ 0.58
CNN2-211ENST00000606983 PBRM1Q86U86 1689 aa18.67■□□□□ 0.58
CNN2-211ENST00000606983 MAGI1Q96QZ7 1491 aaPredicted RBP18.66■□□□□ 0.58
CNN2-211ENST00000606983 SNAPC4Q5SXM2 1469 aa18.63■□□□□ 0.57
CNN2-211ENST00000606983 RUSC2Q8N2Y8 1516 aa18.62■□□□□ 0.57
CNN2-211ENST00000606983 IGF1RP08069 1367 aa18.61■□□□□ 0.57
CNN2-211ENST00000606983 CUL7Q14999 1698 aa18.6■□□□□ 0.57
CNN2-211ENST00000606983 FHAD1B1AJZ9 1412 aa18.59■□□□□ 0.57
CNN2-211ENST00000606983 CSRNP3Q8WYN3 585 aa18.59■□□□□ 0.57
CNN2-211ENST00000606983 ADAMTS12P58397 1594 aa18.57■□□□□ 0.56
CNN2-211ENST00000606983 FAM9AQ8IZU1 332 aaPredicted RBP18.57■□□□□ 0.56
CNN2-211ENST00000606983 SYNJ2O15056 1496 aa18.57■□□□□ 0.56
CNN2-211ENST00000606983 CARMIL1Q5VZK9 1371 aa18.55■□□□□ 0.56
CNN2-211ENST00000606983 CHMP7Q8WUX9 453 aaPredicted RBP18.54■□□□□ 0.56
CNN2-211ENST00000606983 FBLN2P98095 1184 aa18.52■□□□□ 0.56
CNN2-211ENST00000606983 RAPGEF2Q9Y4G8 1499 aa18.5■□□□□ 0.55
CNN2-211ENST00000606983 PRXQ9BXM0 1461 aa18.49■□□□□ 0.55
CNN2-211ENST00000606983 GRIN2AQ12879 1464 aa18.48■□□□□ 0.55
CNN2-211ENST00000606983 KIF21BO75037 1637 aa18.45■□□□□ 0.54
CNN2-211ENST00000606983 CHD1O14646 1710 aa18.43■□□□□ 0.54
CNN2-211ENST00000606983 GOLGA3Q08378 1498 aa18.4■□□□□ 0.54
CNN2-211ENST00000606983 OSCARQ8IYS5 282 aa18.39■□□□□ 0.53
CNN2-211ENST00000606983 NUP160Q12769 1436 aa18.37■□□□□ 0.53
CNN2-211ENST00000606983 CEP170Q5SW79 1584 aa18.33■□□□□ 0.52
CNN2-211ENST00000606983 UBTFP17480 764 aaKnown RBP18.31■□□□□ 0.52
CNN2-211ENST00000606983 KIAA0586Q9BVV6 1533 aa18.31■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms