RNA–Protein interactions for RNA: ENST00000606885.1

AP002856.2-202, humanhuman

TSL 1 (best) BASIC

Gene AP002856.2, Length 755 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP002856.2-202ENST00000606885 AEBP2Q6ZN18 517 aaPredicted RBP23.83■■□□□ 1.41
AP002856.2-202ENST00000606885 CHIC1Q5VXU3 224 aa23.4■■□□□ 1.34
AP002856.2-202ENST00000606885 NISCHQ9Y2I1 1504 aa23.33■■□□□ 1.33
AP002856.2-202ENST00000606885 ABCC9O60706 1549 aa22.47■■□□□ 1.19
AP002856.2-202ENST00000606885 DNAJC5BQ9UF47 199 aa22.11■■□□□ 1.13
AP002856.2-202ENST00000606885 CCDC180Q9P1Z9 1646 aa21.44■■□□□ 1.02
AP002856.2-202ENST00000606885 DNAJC5Q9H3Z4 198 aa21.24■□□□□ 0.99
AP002856.2-202ENST00000606885 RB1CC1Q8TDY2 1594 aa20.97■□□□□ 0.95
AP002856.2-202ENST00000606885 PABPN1Q86U42 306 aaKnown RBP eCLIP20.76■□□□□ 0.91
AP002856.2-202ENST00000606885 PHF23Q9BUL5 403 aaPredicted RBP20.62■□□□□ 0.89
AP002856.2-202ENST00000606885 NACADO15069 1562 aa20.58■□□□□ 0.88
AP002856.2-202ENST00000606885 CECR2Q9BXF3 1484 aa20.42■□□□□ 0.86
AP002856.2-202ENST00000606885 UNC13AQ9UPW8 1703 aa20.4■□□□□ 0.86
AP002856.2-202ENST00000606885 BICRAQ9NZM4 1560 aa20.34■□□□□ 0.85
AP002856.2-202ENST00000606885 CC2D2AQ9P2K1 1620 aa20.27■□□□□ 0.83
AP002856.2-202ENST00000606885 DCAF8L2P0C7V8 631 aa20.19■□□□□ 0.82
AP002856.2-202ENST00000606885 SENP3Q9H4L4 574 aaPredicted RBP20.16■□□□□ 0.82
AP002856.2-202ENST00000606885 SHROOM4Q9ULL8 1493 aa20.09■□□□□ 0.81
AP002856.2-202ENST00000606885 MYO15BQ96JP2 1530 aa19.97■□□□□ 0.79
AP002856.2-202ENST00000606885 EIF4G1Q04637 1599 aaKnown RBP19.95■□□□□ 0.78
AP002856.2-202ENST00000606885 CUX2O14529 1486 aa19.94■□□□□ 0.78
AP002856.2-202ENST00000606885 TRIM41Q8WV44 630 aa19.75■□□□□ 0.75
AP002856.2-202ENST00000606885 ERCC6Q03468 1493 aa19.55■□□□□ 0.72
AP002856.2-202ENST00000606885 SCRIBQ14160 1630 aa19.42■□□□□ 0.7
AP002856.2-202ENST00000606885 DCAF1Q9Y4B6 1507 aa19.26■□□□□ 0.67
AP002856.2-202ENST00000606885 ZCCHC6Q5VYS8 1495 aaKnown RBP19.08■□□□□ 0.64
AP002856.2-202ENST00000606885 PLPPR3Q6T4P5 718 aa19.05■□□□□ 0.64
AP002856.2-202ENST00000606885 NCAPD3P42695 1498 aa19.02■□□□□ 0.63
AP002856.2-202ENST00000606885 THOC2Q8NI27 1593 aaKnown RBP19.02■□□□□ 0.63
AP002856.2-202ENST00000606885 NESP48681 1621 aa18.96■□□□□ 0.63
AP002856.2-202ENST00000606885 OSCARQ8IYS5 282 aa18.89■□□□□ 0.61
AP002856.2-202ENST00000606885 SMARCA2P51531 1590 aa18.78■□□□□ 0.6
AP002856.2-202ENST00000606885 POTEDQ86YR6 584 aa18.78■□□□□ 0.6
AP002856.2-202ENST00000606885 BAZ1AQ9NRL2 1556 aaPredicted RBP18.76■□□□□ 0.59
AP002856.2-202ENST00000606885 ATAD2BQ9ULI0 1458 aa18.76■□□□□ 0.59
AP002856.2-202ENST00000606885 LAMC3Q9Y6N6 1575 aa18.76■□□□□ 0.59
AP002856.2-202ENST00000606885 HMGXB3Q12766 1538 aa18.74■□□□□ 0.59
AP002856.2-202ENST00000606885 PDS5BQ9NTI5 1447 aa18.73■□□□□ 0.59
AP002856.2-202ENST00000606885 FOXD1Q16676 465 aa18.71■□□□□ 0.59
AP002856.2-202ENST00000606885 KIF21AQ7Z4S6 1674 aa18.67■□□□□ 0.58
AP002856.2-202ENST00000606885 RIMBP3CA6NJZ7 1639 aa18.63■□□□□ 0.57
AP002856.2-202ENST00000606885 RIMBP3BA6NNM3 1639 aa18.63■□□□□ 0.57
AP002856.2-202ENST00000606885 RIMBP3Q9UFD9 1639 aa18.63■□□□□ 0.57
AP002856.2-202ENST00000606885 TRHP20396 242 aaPredicted RBP18.63■□□□□ 0.57
AP002856.2-202ENST00000606885 MRC2Q9UBG0 1479 aa18.57■□□□□ 0.56
AP002856.2-202ENST00000606885 WDR62O43379 1518 aa18.54■□□□□ 0.56
AP002856.2-202ENST00000606885 BAZ1BQ9UIG0 1483 aaKnown RBP18.52■□□□□ 0.55
AP002856.2-202ENST00000606885 ARHGEF11O15085 1522 aa18.48■□□□□ 0.55
AP002856.2-202ENST00000606885 CYB5RLQ6IPT4 315 aa18.46■□□□□ 0.55
AP002856.2-202ENST00000606885 SMARCA4P51532 1647 aa18.41■□□□□ 0.54
AP002856.2-202ENST00000606885 CADPSQ9ULU8 1353 aa18.39■□□□□ 0.53
AP002856.2-202ENST00000606885 ILDR1Q86SU0 546 aaPredicted RBP18.31■□□□□ 0.52
AP002856.2-202ENST00000606885 PEG3Q9GZU2 1588 aa18.3■□□□□ 0.52
AP002856.2-202ENST00000606885 CEP164Q9UPV0 1460 aa18.26■□□□□ 0.51
AP002856.2-202ENST00000606885 ARAP1Q96P48 1450 aa18.2■□□□□ 0.5
AP002856.2-202ENST00000606885 PPP6R1Q9UPN7 881 aa18.14■□□□□ 0.49
AP002856.2-202ENST00000606885 FANCD2Q9BXW9 1451 aa18.14■□□□□ 0.49
AP002856.2-202ENST00000606885 ADRA2BP18089 450 aa18.1■□□□□ 0.49
AP002856.2-202ENST00000606885 RSF1Q96T23 1441 aaPredicted RBP18.08■□□□□ 0.49
AP002856.2-202ENST00000606885 URB2Q14146 1524 aaKnown RBP18.03■□□□□ 0.48
AP002856.2-202ENST00000606885 IFT140Q96RY7 1462 aa17.97■□□□□ 0.47
AP002856.2-202ENST00000606885 ZNF608Q9ULD9 1512 aaPredicted RBP17.97■□□□□ 0.47
AP002856.2-202ENST00000606885 CFTRP13569 1480 aa17.92■□□□□ 0.46
AP002856.2-202ENST00000606885 MROH2BQ7Z745 1585 aa17.91■□□□□ 0.46
AP002856.2-202ENST00000606885 CHD1O14646 1710 aa17.88■□□□□ 0.45
AP002856.2-202ENST00000606885 FBLN2P98095 1184 aa17.84■□□□□ 0.45
AP002856.2-202ENST00000606885 EIF4G3O43432 1585 aaKnown RBP17.81■□□□□ 0.44
AP002856.2-202ENST00000606885 AQRO60306 1485 aaKnown RBP eCLIP17.69■□□□□ 0.42
AP002856.2-202ENST00000606885 CLASP1Q7Z460 1538 aa17.69■□□□□ 0.42
AP002856.2-202ENST00000606885 KDM4FA0A1W2PPD8 638 aa17.69■□□□□ 0.42
AP002856.2-202ENST00000606885 PIAS4Q8N2W9 510 aaPredicted RBP17.65■□□□□ 0.42
AP002856.2-202ENST00000606885 TOPBP1Q92547 1522 aa17.65■□□□□ 0.42
AP002856.2-202ENST00000606885 ABCC8Q09428 1581 aa17.65■□□□□ 0.42
AP002856.2-202ENST00000606885 MSH5O43196 834 aa17.64■□□□□ 0.41
AP002856.2-202ENST00000606885 GAPVD1Q14C86 1478 aa17.63■□□□□ 0.41
AP002856.2-202ENST00000606885 WIZO95785 1651 aa17.62■□□□□ 0.41
AP002856.2-202ENST00000606885 SYNJ1O43426 1573 aa17.62■□□□□ 0.41
AP002856.2-202ENST00000606885 PRDM2Q13029 1718 aa17.59■□□□□ 0.41
AP002856.2-202ENST00000606885 CHMP7Q8WUX9 453 aaPredicted RBP17.57■□□□□ 0.4
AP002856.2-202ENST00000606885 TARBP1Q13395 1621 aaKnown RBP17.56■□□□□ 0.4
AP002856.2-202ENST00000606885 FBXO41Q8TF61 875 aa17.52■□□□□ 0.4
AP002856.2-202ENST00000606885 ERCC6L2Q5T890 1561 aa17.5■□□□□ 0.39
AP002856.2-202ENST00000606885 KIF13AQ9H1H9 1805 aa17.49■□□□□ 0.39
AP002856.2-202ENST00000606885 DNMBPQ6XZF7 1577 aa17.49■□□□□ 0.39
AP002856.2-202ENST00000606885 SNAPC4Q5SXM2 1469 aa17.47■□□□□ 0.39
AP002856.2-202ENST00000606885 MAGI1Q96QZ7 1491 aaPredicted RBP17.44■□□□□ 0.38
AP002856.2-202ENST00000606885 TDRD9Q8NDG6 1382 aaKnown RBP17.41■□□□□ 0.38
AP002856.2-202ENST00000606885 WDR97A6NE52 1622 aa17.39■□□□□ 0.38
AP002856.2-202ENST00000606885 SYNJ2O15056 1496 aa17.39■□□□□ 0.37
AP002856.2-202ENST00000606885 POLA1P09884 1462 aaPredicted RBP17.38■□□□□ 0.37
AP002856.2-202ENST00000606885 TOP2AP11388 1531 aaKnown RBP17.37■□□□□ 0.37
AP002856.2-202ENST00000606885 LMTK3Q96Q04 1460 aa17.36■□□□□ 0.37
AP002856.2-202ENST00000606885 HECW2Q9P2P5 1572 aa17.36■□□□□ 0.37
AP002856.2-202ENST00000606885 FAM69CQ0P6D2 419 aa17.35■□□□□ 0.37
AP002856.2-202ENST00000606885 SOGA1O94964 1423 aa17.34■□□□□ 0.37
AP002856.2-202ENST00000606885 KDM6BO15054 1643 aa17.33■□□□□ 0.37
AP002856.2-202ENST00000606885 RAD54L2Q9Y4B4 1467 aa17.32■□□□□ 0.36
AP002856.2-202ENST00000606885 GRIN2BQ13224 1484 aa17.31■□□□□ 0.36
AP002856.2-202ENST00000606885 ABCC10Q5T3U5 1492 aa17.31■□□□□ 0.36
AP002856.2-202ENST00000606885 SOCS7O14512 581 aa17.29■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms