RNA–Protein interactions for RNA: ENST00000606225.1

CSNK1G1-203, Transcript of casein kinase 1 gamma 1, humanhuman

TSL 1 (best)

Gene CSNK1G1, Length 1,950 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1G1-203ENST00000606225 NISCHQ9Y2I1 1504 aa27.37■■□□□ 1.97
CSNK1G1-203ENST00000606225 CCDC180Q9P1Z9 1646 aa24.19■■□□□ 1.46
CSNK1G1-203ENST00000606225 ABCC9O60706 1549 aa23.46■■□□□ 1.35
CSNK1G1-203ENST00000606225 ZCCHC6Q5VYS8 1495 aaKnown RBP22.89■■□□□ 1.25
CSNK1G1-203ENST00000606225 DCAF8L2P0C7V8 631 aa22.78■■□□□ 1.24
CSNK1G1-203ENST00000606225 NACADO15069 1562 aa22.62■■□□□ 1.21
CSNK1G1-203ENST00000606225 RB1CC1Q8TDY2 1594 aa22.6■■□□□ 1.21
CSNK1G1-203ENST00000606225 DCAF1Q9Y4B6 1507 aa22.58■■□□□ 1.2
CSNK1G1-203ENST00000606225 MYO15BQ96JP2 1530 aa22.53■■□□□ 1.2
CSNK1G1-203ENST00000606225 UNC13AQ9UPW8 1703 aa22.28■■□□□ 1.16
CSNK1G1-203ENST00000606225 SCRIBQ14160 1630 aa22.22■■□□□ 1.15
CSNK1G1-203ENST00000606225 BICRAQ9NZM4 1560 aa22.01■■□□□ 1.11
CSNK1G1-203ENST00000606225 PABPN1Q86U42 306 aaKnown RBP eCLIP21.97■■□□□ 1.11
CSNK1G1-203ENST00000606225 SHROOM4Q9ULL8 1493 aa21.94■■□□□ 1.1
CSNK1G1-203ENST00000606225 CECR2Q9BXF3 1484 aa21.38■■□□□ 1.01
CSNK1G1-203ENST00000606225 EIF4G1Q04637 1599 aaKnown RBP21.37■■□□□ 1.01
CSNK1G1-203ENST00000606225 DNAJC5BQ9UF47 199 aa21.28■■□□□ 1
CSNK1G1-203ENST00000606225 CC2D2AQ9P2K1 1620 aa21.23■□□□□ 0.99
CSNK1G1-203ENST00000606225 SMARCA4P51532 1647 aa21.22■□□□□ 0.99
CSNK1G1-203ENST00000606225 BAZ1AQ9NRL2 1556 aaPredicted RBP21.18■□□□□ 0.98
CSNK1G1-203ENST00000606225 MROH2BQ7Z745 1585 aa21.17■□□□□ 0.98
CSNK1G1-203ENST00000606225 WIZO95785 1651 aa21■□□□□ 0.95
CSNK1G1-203ENST00000606225 RSF1Q96T23 1441 aaPredicted RBP20.98■□□□□ 0.95
CSNK1G1-203ENST00000606225 ATAD2BQ9ULI0 1458 aa20.98■□□□□ 0.95
CSNK1G1-203ENST00000606225 PEG3Q9GZU2 1588 aa20.95■□□□□ 0.94
CSNK1G1-203ENST00000606225 SMARCA2P51531 1590 aa20.93■□□□□ 0.94
CSNK1G1-203ENST00000606225 NCAPD3P42695 1498 aa20.87■□□□□ 0.93
CSNK1G1-203ENST00000606225 HMGXB3Q12766 1538 aa20.83■□□□□ 0.92
CSNK1G1-203ENST00000606225 BAZ1BQ9UIG0 1483 aaKnown RBP20.83■□□□□ 0.92
CSNK1G1-203ENST00000606225 SUPT5HO00267 1087 aaKnown RBP20.72■□□□□ 0.91
CSNK1G1-203ENST00000606225 TOP2AP11388 1531 aaKnown RBP20.69■□□□□ 0.9
CSNK1G1-203ENST00000606225 CCDC88BA6NC98 1476 aa20.47■□□□□ 0.87
CSNK1G1-203ENST00000606225 NESP48681 1621 aa20.43■□□□□ 0.86
CSNK1G1-203ENST00000606225 LAMC3Q9Y6N6 1575 aa20.3■□□□□ 0.84
CSNK1G1-203ENST00000606225 CADPSQ9ULU8 1353 aa20.29■□□□□ 0.84
CSNK1G1-203ENST00000606225 CFTRP13569 1480 aa20.26■□□□□ 0.83
CSNK1G1-203ENST00000606225 KIF21AQ7Z4S6 1674 aa20.22■□□□□ 0.83
CSNK1G1-203ENST00000606225 PRDM2Q13029 1718 aa20.21■□□□□ 0.83
CSNK1G1-203ENST00000606225 ERCC6Q03468 1493 aa20.13■□□□□ 0.81
CSNK1G1-203ENST00000606225 FANCD2Q9BXW9 1451 aa20.11■□□□□ 0.81
CSNK1G1-203ENST00000606225 PDS5BQ9NTI5 1447 aa20.1■□□□□ 0.81
CSNK1G1-203ENST00000606225 CEP164Q9UPV0 1460 aa20.03■□□□□ 0.8
CSNK1G1-203ENST00000606225 THOC2Q8NI27 1593 aaKnown RBP20.03■□□□□ 0.8
CSNK1G1-203ENST00000606225 MRC2Q9UBG0 1479 aa19.93■□□□□ 0.78
CSNK1G1-203ENST00000606225 URB2Q14146 1524 aaKnown RBP19.93■□□□□ 0.78
CSNK1G1-203ENST00000606225 ABCC8Q09428 1581 aa19.92■□□□□ 0.78
CSNK1G1-203ENST00000606225 WDR62O43379 1518 aa19.88■□□□□ 0.77
CSNK1G1-203ENST00000606225 CUX1P39880 1505 aa19.83■□□□□ 0.77
CSNK1G1-203ENST00000606225 TOPBP1Q92547 1522 aa19.83■□□□□ 0.77
CSNK1G1-203ENST00000606225 DNMBPQ6XZF7 1577 aa19.82■□□□□ 0.76
CSNK1G1-203ENST00000606225 SYNJ1O43426 1573 aa19.8■□□□□ 0.76
CSNK1G1-203ENST00000606225 WRNQ14191 1432 aaPredicted RBP eCLIP19.76■□□□□ 0.75
CSNK1G1-203ENST00000606225 CUX2O14529 1486 aa19.74■□□□□ 0.75
CSNK1G1-203ENST00000606225 BIVM-ERCC5R4GMW8 1640 aa19.72■□□□□ 0.75
CSNK1G1-203ENST00000606225 TOP2BQ02880 1626 aa19.71■□□□□ 0.75
CSNK1G1-203ENST00000606225 POLA1P09884 1462 aaPredicted RBP19.7■□□□□ 0.74
CSNK1G1-203ENST00000606225 FGD5Q6ZNL6 1462 aa19.7■□□□□ 0.74
CSNK1G1-203ENST00000606225 RAD54L2Q9Y4B4 1467 aa19.64■□□□□ 0.74
CSNK1G1-203ENST00000606225 TARBP1Q13395 1621 aaKnown RBP19.63■□□□□ 0.73
CSNK1G1-203ENST00000606225 ZNF608Q9ULD9 1512 aaPredicted RBP19.58■□□□□ 0.72
CSNK1G1-203ENST00000606225 WDR97A6NE52 1622 aa19.57■□□□□ 0.72
CSNK1G1-203ENST00000606225 IFT140Q96RY7 1462 aa19.56■□□□□ 0.72
CSNK1G1-203ENST00000606225 SOGA1O94964 1423 aa19.56■□□□□ 0.72
CSNK1G1-203ENST00000606225 EIF4G3O43432 1585 aaKnown RBP19.51■□□□□ 0.71
CSNK1G1-203ENST00000606225 CHIC1Q5VXU3 224 aa19.48■□□□□ 0.71
CSNK1G1-203ENST00000606225 AQRO60306 1485 aaKnown RBP eCLIP19.48■□□□□ 0.715e-7■■■■■ 30.5
CSNK1G1-203ENST00000606225 ABCA10Q8WWZ4 1543 aa19.47■□□□□ 0.71
CSNK1G1-203ENST00000606225 TDRD9Q8NDG6 1382 aaKnown RBP19.47■□□□□ 0.71
CSNK1G1-203ENST00000606225 TRIM41Q8WV44 630 aa19.47■□□□□ 0.71
CSNK1G1-203ENST00000606225 ABCA5Q8WWZ7 1642 aa19.43■□□□□ 0.7
CSNK1G1-203ENST00000606225 PBRM1Q86U86 1689 aa19.39■□□□□ 0.69
CSNK1G1-203ENST00000606225 GAPVD1Q14C86 1478 aa19.36■□□□□ 0.69
CSNK1G1-203ENST00000606225 RUSC2Q8N2Y8 1516 aa19.36■□□□□ 0.69
CSNK1G1-203ENST00000606225 SNAPC4Q5SXM2 1469 aa19.29■□□□□ 0.68
CSNK1G1-203ENST00000606225 GRIN2BQ13224 1484 aa19.29■□□□□ 0.68
CSNK1G1-203ENST00000606225 KIF27Q86VH2 1401 aa19.28■□□□□ 0.68
CSNK1G1-203ENST00000606225 CHD1O14646 1710 aa19.24■□□□□ 0.67
CSNK1G1-203ENST00000606225 ERICH3Q5RHP9 1530 aa19.23■□□□□ 0.67
CSNK1G1-203ENST00000606225 ADAMTS12P58397 1594 aa19.22■□□□□ 0.67
CSNK1G1-203ENST00000606225 MAGI1Q96QZ7 1491 aaPredicted RBP19.2■□□□□ 0.66
CSNK1G1-203ENST00000606225 IGF1RP08069 1367 aa19.19■□□□□ 0.66
CSNK1G1-203ENST00000606225 FAM9AQ8IZU1 332 aaPredicted RBP19.18■□□□□ 0.66
CSNK1G1-203ENST00000606225 FBLN2P98095 1184 aa19.15■□□□□ 0.66
CSNK1G1-203ENST00000606225 SYNJ2O15056 1496 aa19.14■□□□□ 0.65
CSNK1G1-203ENST00000606225 CUL7Q14999 1698 aa19.14■□□□□ 0.65
CSNK1G1-203ENST00000606225 FHAD1B1AJZ9 1412 aa19.11■□□□□ 0.65
CSNK1G1-203ENST00000606225 GRIN2AQ12879 1464 aa19.08■□□□□ 0.65
CSNK1G1-203ENST00000606225 CHMP7Q8WUX9 453 aaPredicted RBP19.08■□□□□ 0.64
CSNK1G1-203ENST00000606225 CARMIL1Q5VZK9 1371 aa19.07■□□□□ 0.64
CSNK1G1-203ENST00000606225 EEA1Q15075 1411 aa19.04■□□□□ 0.64
CSNK1G1-203ENST00000606225 CEP170Q5SW79 1584 aa19.04■□□□□ 0.64
CSNK1G1-203ENST00000606225 CSRNP3Q8WYN3 585 aa19.03■□□□□ 0.64
CSNK1G1-203ENST00000606225 PRXQ9BXM0 1461 aa19.02■□□□□ 0.64
CSNK1G1-203ENST00000606225 RAPGEF2Q9Y4G8 1499 aa19■□□□□ 0.63
CSNK1G1-203ENST00000606225 EHMT2Q96KQ7 1210 aa18.99■□□□□ 0.63
CSNK1G1-203ENST00000606225 OSCARQ8IYS5 282 aa18.97■□□□□ 0.63
CSNK1G1-203ENST00000606225 NUP160Q12769 1436 aa18.96■□□□□ 0.63
CSNK1G1-203ENST00000606225 CLASP1Q7Z460 1538 aa18.96■□□□□ 0.63
CSNK1G1-203ENST00000606225 KIF21BO75037 1637 aa18.94■□□□□ 0.62
CSNK1G1-203ENST00000606225 CTTNBP2Q8WZ74 1663 aa18.9■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms