RNA–Protein interactions for RNA: ENST00000605961.1

LMO7-227, Transcript of LIM domain 7, humanhuman

Gene LMO7, Length 2,039 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO7-227ENST00000605961 NISCHQ9Y2I1 1504 aa18.58■□□□□ 0.56
LMO7-227ENST00000605961 CCDC180Q9P1Z9 1646 aa16.4■□□□□ 0.22
LMO7-227ENST00000605961 ABCC9O60706 1549 aa15.95■□□□□ 0.14
LMO7-227ENST00000605961 DCAF8L2P0C7V8 631 aa15.58■□□□□ 0.08
LMO7-227ENST00000605961 ZCCHC6Q5VYS8 1495 aaKnown RBP15.49■□□□□ 0.07
LMO7-227ENST00000605961 NACADO15069 1562 aa15.42■□□□□ 0.06
LMO7-227ENST00000605961 RB1CC1Q8TDY2 1594 aa15.4■□□□□ 0.06
LMO7-227ENST00000605961 DCAF1Q9Y4B6 1507 aa15.36■□□□□ 0.05
LMO7-227ENST00000605961 MYO15BQ96JP2 1530 aa15.35■□□□□ 0.05
LMO7-227ENST00000605961 SCRIBQ14160 1630 aa15.02□□□□□ -0.01
LMO7-227ENST00000605961 PABPN1Q86U42 306 aaKnown RBP eCLIP14.97□□□□□ -0.01
LMO7-227ENST00000605961 UNC13AQ9UPW8 1703 aa14.97□□□□□ -0.01
LMO7-227ENST00000605961 BICRAQ9NZM4 1560 aa14.88□□□□□ -0.03
LMO7-227ENST00000605961 SHROOM4Q9ULL8 1493 aa14.85□□□□□ -0.03
LMO7-227ENST00000605961 DNAJC5BQ9UF47 199 aa14.73□□□□□ -0.05
LMO7-227ENST00000605961 EIF4G1Q04637 1599 aaKnown RBP14.5□□□□□ -0.09
LMO7-227ENST00000605961 CECR2Q9BXF3 1484 aa14.46□□□□□ -0.1
LMO7-227ENST00000605961 CC2D2AQ9P2K1 1620 aa14.4□□□□□ -0.1
LMO7-227ENST00000605961 AEBP2Q6ZN18 517 aaPredicted RBP14.39□□□□□ -0.11
LMO7-227ENST00000605961 BAZ1AQ9NRL2 1556 aaPredicted RBP14.39□□□□□ -0.11
LMO7-227ENST00000605961 SMARCA4P51532 1647 aa14.36□□□□□ -0.11
LMO7-227ENST00000605961 MROH2BQ7Z745 1585 aa14.32□□□□□ -0.12
LMO7-227ENST00000605961 ATAD2BQ9ULI0 1458 aa14.27□□□□□ -0.13
LMO7-227ENST00000605961 SMARCA2P51531 1590 aa14.26□□□□□ -0.13
LMO7-227ENST00000605961 RSF1Q96T23 1441 aaPredicted RBP14.23□□□□□ -0.13
LMO7-227ENST00000605961 NCAPD3P42695 1498 aa14.23□□□□□ -0.13
LMO7-227ENST00000605961 PEG3Q9GZU2 1588 aa14.2□□□□□ -0.14
LMO7-227ENST00000605961 BAZ1BQ9UIG0 1483 aaKnown RBP14.17□□□□□ -0.14
LMO7-227ENST00000605961 WIZO95785 1651 aa14.16□□□□□ -0.14
LMO7-227ENST00000605961 HMGXB3Q12766 1538 aa14.15□□□□□ -0.14
LMO7-227ENST00000605961 SUPT5HO00267 1087 aaKnown RBP14.09□□□□□ -0.15
LMO7-227ENST00000605961 TOP2AP11388 1531 aaKnown RBP14.03□□□□□ -0.16
LMO7-227ENST00000605961 CHIC1Q5VXU3 224 aa13.96□□□□□ -0.17
LMO7-227ENST00000605961 CCDC88BA6NC98 1476 aa13.88□□□□□ -0.19
LMO7-227ENST00000605961 CUX2O14529 1486 aa13.88□□□□□ -0.19
LMO7-227ENST00000605961 CADPSQ9ULU8 1353 aa13.85□□□□□ -0.19
LMO7-227ENST00000605961 NESP48681 1621 aa13.83□□□□□ -0.2
LMO7-227ENST00000605961 LAMC3Q9Y6N6 1575 aa13.81□□□□□ -0.2
LMO7-227ENST00000605961 DNAJC5Q9H3Z4 198 aa13.78□□□□□ -0.2
LMO7-227ENST00000605961 CFTRP13569 1480 aa13.78□□□□□ -0.2
LMO7-227ENST00000605961 ERCC6Q03468 1493 aa13.76□□□□□ -0.21
LMO7-227ENST00000605961 PDS5BQ9NTI5 1447 aa13.76□□□□□ -0.21
LMO7-227ENST00000605961 FANCD2Q9BXW9 1451 aa13.68□□□□□ -0.22
LMO7-227ENST00000605961 CEP164Q9UPV0 1460 aa13.65□□□□□ -0.22
LMO7-227ENST00000605961 KIF21AQ7Z4S6 1674 aa13.64□□□□□ -0.23
LMO7-227ENST00000605961 PRDM2Q13029 1718 aa13.63□□□□□ -0.23
LMO7-227ENST00000605961 MRC2Q9UBG0 1479 aa13.59□□□□□ -0.23
LMO7-227ENST00000605961 THOC2Q8NI27 1593 aaKnown RBP13.56□□□□□ -0.24
LMO7-227ENST00000605961 WDR62O43379 1518 aa13.51□□□□□ -0.25
LMO7-227ENST00000605961 URB2Q14146 1524 aaKnown RBP13.51□□□□□ -0.25
LMO7-227ENST00000605961 ABCC8Q09428 1581 aa13.5□□□□□ -0.25
LMO7-227ENST00000605961 TOPBP1Q92547 1522 aa13.47□□□□□ -0.25
LMO7-227ENST00000605961 DNMBPQ6XZF7 1577 aa13.46□□□□□ -0.25
LMO7-227ENST00000605961 WRNQ14191 1432 aaPredicted RBP eCLIP13.43□□□□□ -0.26
LMO7-227ENST00000605961 CUX1P39880 1505 aa13.42□□□□□ -0.26
LMO7-227ENST00000605961 POLA1P09884 1462 aaPredicted RBP13.36□□□□□ -0.27
LMO7-227ENST00000605961 FGD5Q6ZNL6 1462 aa13.36□□□□□ -0.27
LMO7-227ENST00000605961 IFT140Q96RY7 1462 aa13.36□□□□□ -0.27
LMO7-227ENST00000605961 SOGA1O94964 1423 aa13.35□□□□□ -0.27
LMO7-227ENST00000605961 SYNJ1O43426 1573 aa13.34□□□□□ -0.27
LMO7-227ENST00000605961 TOP2BQ02880 1626 aa13.34□□□□□ -0.27
LMO7-227ENST00000605961 BIVM-ERCC5R4GMW8 1640 aa13.32□□□□□ -0.28
LMO7-227ENST00000605961 RAD54L2Q9Y4B4 1467 aa13.32□□□□□ -0.28
LMO7-227ENST00000605961 TRIM41Q8WV44 630 aa13.3□□□□□ -0.28
LMO7-227ENST00000605961 TARBP1Q13395 1621 aaKnown RBP13.27□□□□□ -0.28
LMO7-227ENST00000605961 ZNF608Q9ULD9 1512 aaPredicted RBP13.26□□□□□ -0.29
LMO7-227ENST00000605961 TDRD9Q8NDG6 1382 aaKnown RBP13.25□□□□□ -0.29
LMO7-227ENST00000605961 AQRO60306 1485 aaKnown RBP eCLIP13.24□□□□□ -0.29
LMO7-227ENST00000605961 ABCA10Q8WWZ4 1543 aa13.23□□□□□ -0.29
LMO7-227ENST00000605961 EIF4G3O43432 1585 aaKnown RBP13.2□□□□□ -0.3
LMO7-227ENST00000605961 WDR97A6NE52 1622 aa13.19□□□□□ -0.3
LMO7-227ENST00000605961 GAPVD1Q14C86 1478 aa13.18□□□□□ -0.3
LMO7-227ENST00000605961 GRIN2BQ13224 1484 aa13.16□□□□□ -0.3
LMO7-227ENST00000605961 KIF27Q86VH2 1401 aa13.15□□□□□ -0.3
LMO7-227ENST00000605961 ABCA5Q8WWZ7 1642 aa13.14□□□□□ -0.31
LMO7-227ENST00000605961 FBLN2P98095 1184 aa13.12□□□□□ -0.31
LMO7-227ENST00000605961 SNAPC4Q5SXM2 1469 aa13.11□□□□□ -0.31
LMO7-227ENST00000605961 PBRM1Q86U86 1689 aa13.09□□□□□ -0.31
LMO7-227ENST00000605961 OSCARQ8IYS5 282 aa13.09□□□□□ -0.31
LMO7-227ENST00000605961 CHMP7Q8WUX9 453 aaPredicted RBP13.09□□□□□ -0.31
LMO7-227ENST00000605961 MAGI1Q96QZ7 1491 aaPredicted RBP13.09□□□□□ -0.31
LMO7-227ENST00000605961 ERICH3Q5RHP9 1530 aa13.08□□□□□ -0.32
LMO7-227ENST00000605961 IGF1RP08069 1367 aa13.07□□□□□ -0.32
LMO7-227ENST00000605961 RUSC2Q8N2Y8 1516 aa13.06□□□□□ -0.32
LMO7-227ENST00000605961 FHAD1B1AJZ9 1412 aa13.04□□□□□ -0.32
LMO7-227ENST00000605961 SYNJ2O15056 1496 aa13.04□□□□□ -0.32
LMO7-227ENST00000605961 FAM9AQ8IZU1 332 aaPredicted RBP13.03□□□□□ -0.32
LMO7-227ENST00000605961 ADAMTS12P58397 1594 aa13.01□□□□□ -0.33
LMO7-227ENST00000605961 CARMIL1Q5VZK9 1371 aa13.01□□□□□ -0.33
LMO7-227ENST00000605961 EEA1Q15075 1411 aa13.01□□□□□ -0.33
LMO7-227ENST00000605961 CSRNP3Q8WYN3 585 aa13□□□□□ -0.33
LMO7-227ENST00000605961 CHD1O14646 1710 aa12.99□□□□□ -0.33
LMO7-227ENST00000605961 CUL7Q14999 1698 aa12.98□□□□□ -0.33
LMO7-227ENST00000605961 GRIN2AQ12879 1464 aa12.97□□□□□ -0.33
LMO7-227ENST00000605961 RIMBP3CA6NJZ7 1639 aa12.94□□□□□ -0.34
LMO7-227ENST00000605961 RIMBP3BA6NNM3 1639 aa12.94□□□□□ -0.34
LMO7-227ENST00000605961 RIMBP3Q9UFD9 1639 aa12.94□□□□□ -0.34
LMO7-227ENST00000605961 RAPGEF2Q9Y4G8 1499 aa12.94□□□□□ -0.34
LMO7-227ENST00000605961 PRXQ9BXM0 1461 aa12.9□□□□□ -0.34
LMO7-227ENST00000605961 NUP160Q12769 1436 aa12.9□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 192.9 ms