RNA–Protein interactions for RNA: ENST00000602544.5

SFXN2-206, Transcript of sideroflexin 2, humanhuman

TSL 4

Gene SFXN2, Length 606 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN2-206ENST00000602544 NISCHQ9Y2I1 1504 aa35.6■■■■□ 3.29
SFXN2-206ENST00000602544 CCDC180Q9P1Z9 1646 aa31.56■■■□□ 2.64
SFXN2-206ENST00000602544 ABCC9O60706 1549 aa31.19■■■□□ 2.58
SFXN2-206ENST00000602544 DCAF8L2P0C7V8 631 aa30.11■■■□□ 2.41
SFXN2-206ENST00000602544 RB1CC1Q8TDY2 1594 aa29.89■■■□□ 2.38
SFXN2-206ENST00000602544 NACADO15069 1562 aa29.82■■■□□ 2.36
SFXN2-206ENST00000602544 ZCCHC6Q5VYS8 1495 aaKnown RBP29.6■■■□□ 2.33
SFXN2-206ENST00000602544 MYO15BQ96JP2 1530 aa29.56■■■□□ 2.32
SFXN2-206ENST00000602544 DCAF1Q9Y4B6 1507 aa29.4■■■□□ 2.3
SFXN2-206ENST00000602544 PABPN1Q86U42 306 aaKnown RBP eCLIP29.23■■■□□ 2.27
SFXN2-206ENST00000602544 UNC13AQ9UPW8 1703 aa28.94■■■□□ 2.22
SFXN2-206ENST00000602544 SCRIBQ14160 1630 aa28.91■■■□□ 2.22
SFXN2-206ENST00000602544 BICRAQ9NZM4 1560 aa28.86■■■□□ 2.21
SFXN2-206ENST00000602544 DNAJC5BQ9UF47 199 aa28.7■■■□□ 2.18
SFXN2-206ENST00000602544 SHROOM4Q9ULL8 1493 aa28.65■■■□□ 2.18
SFXN2-206ENST00000602544 EIF4G1Q04637 1599 aaKnown RBP28.19■■■□□ 2.1
SFXN2-206ENST00000602544 CC2D2AQ9P2K1 1620 aa28.1■■■□□ 2.09
SFXN2-206ENST00000602544 CECR2Q9BXF3 1484 aa28.04■■■□□ 2.08
SFXN2-206ENST00000602544 BAZ1AQ9NRL2 1556 aaPredicted RBP27.61■■■□□ 2.01
SFXN2-206ENST00000602544 SMARCA4P51532 1647 aa27.59■■■□□ 2.01
SFXN2-206ENST00000602544 NCAPD3P42695 1498 aa27.55■■■□□ 2
SFXN2-206ENST00000602544 ATAD2BQ9ULI0 1458 aa27.55■■■□□ 2
SFXN2-206ENST00000602544 SMARCA2P51531 1590 aa27.51■■□□□ 1.99
SFXN2-206ENST00000602544 MROH2BQ7Z745 1585 aa27.42■■□□□ 1.98
SFXN2-206ENST00000602544 BAZ1BQ9UIG0 1483 aaKnown RBP27.36■■□□□ 1.97
SFXN2-206ENST00000602544 HMGXB3Q12766 1538 aa27.34■■□□□ 1.97
SFXN2-206ENST00000602544 PEG3Q9GZU2 1588 aa27.28■■□□□ 1.96
SFXN2-206ENST00000602544 RSF1Q96T23 1441 aaPredicted RBP27.13■■□□□ 1.93
SFXN2-206ENST00000602544 WIZO95785 1651 aa27.07■■□□□ 1.92
SFXN2-206ENST00000602544 ERCC6Q03468 1493 aa26.97■■□□□ 1.91
SFXN2-206ENST00000602544 NESP48681 1621 aa26.9■■□□□ 1.9
SFXN2-206ENST00000602544 TOP2AP11388 1531 aaKnown RBP26.83■■□□□ 1.89
SFXN2-206ENST00000602544 CADPSQ9ULU8 1353 aa26.81■■□□□ 1.88
SFXN2-206ENST00000602544 LAMC3Q9Y6N6 1575 aa26.78■■□□□ 1.88
SFXN2-206ENST00000602544 PDS5BQ9NTI5 1447 aa26.75■■□□□ 1.87
SFXN2-206ENST00000602544 CUX2O14529 1486 aa26.62■■□□□ 1.85
SFXN2-206ENST00000602544 SUPT5HO00267 1087 aaKnown RBP26.58■■□□□ 1.85
SFXN2-206ENST00000602544 CCDC88BA6NC98 1476 aa26.56■■□□□ 1.84
SFXN2-206ENST00000602544 CFTRP13569 1480 aa26.56■■□□□ 1.84
SFXN2-206ENST00000602544 FANCD2Q9BXW9 1451 aa26.47■■□□□ 1.83
SFXN2-206ENST00000602544 KIF21AQ7Z4S6 1674 aa26.44■■□□□ 1.82
SFXN2-206ENST00000602544 CEP164Q9UPV0 1460 aa26.44■■□□□ 1.82
SFXN2-206ENST00000602544 MRC2Q9UBG0 1479 aa26.42■■□□□ 1.82
SFXN2-206ENST00000602544 THOC2Q8NI27 1593 aaKnown RBP26.4■■□□□ 1.82
SFXN2-206ENST00000602544 WDR62O43379 1518 aa26.24■■□□□ 1.79
SFXN2-206ENST00000602544 URB2Q14146 1524 aaKnown RBP26.14■■□□□ 1.78
SFXN2-206ENST00000602544 PRDM2Q13029 1718 aa26.11■■□□□ 1.77
SFXN2-206ENST00000602544 ABCC8Q09428 1581 aa26.04■■□□□ 1.76
SFXN2-206ENST00000602544 DNAJC5Q9H3Z4 198 aa26■■□□□ 1.75
SFXN2-206ENST00000602544 TOPBP1Q92547 1522 aa25.99■■□□□ 1.75
SFXN2-206ENST00000602544 DNMBPQ6XZF7 1577 aa25.92■■□□□ 1.74
SFXN2-206ENST00000602544 IFT140Q96RY7 1462 aa25.91■■□□□ 1.74
SFXN2-206ENST00000602544 POLA1P09884 1462 aaPredicted RBP25.77■■□□□ 1.72
SFXN2-206ENST00000602544 SOGA1O94964 1423 aa25.76■■□□□ 1.71
SFXN2-206ENST00000602544 ZNF608Q9ULD9 1512 aaPredicted RBP25.75■■□□□ 1.71
SFXN2-206ENST00000602544 CUX1P39880 1505 aa25.73■■□□□ 1.71
SFXN2-206ENST00000602544 FGD5Q6ZNL6 1462 aa25.7■■□□□ 1.7
SFXN2-206ENST00000602544 RAD54L2Q9Y4B4 1467 aa25.69■■□□□ 1.7
SFXN2-206ENST00000602544 OSCARQ8IYS5 282 aa25.66■■□□□ 1.7
SFXN2-206ENST00000602544 AQRO60306 1485 aaKnown RBP eCLIP25.65■■□□□ 1.74e-7■■■■■ 31.4
SFXN2-206ENST00000602544 WRNQ14191 1432 aaPredicted RBP eCLIP25.63■■□□□ 1.69
SFXN2-206ENST00000602544 TDRD9Q8NDG6 1382 aaKnown RBP25.63■■□□□ 1.69
SFXN2-206ENST00000602544 TARBP1Q13395 1621 aaKnown RBP25.61■■□□□ 1.69
SFXN2-206ENST00000602544 EIF4G3O43432 1585 aaKnown RBP25.56■■□□□ 1.68
SFXN2-206ENST00000602544 FBLN2P98095 1184 aa25.55■■□□□ 1.68
SFXN2-206ENST00000602544 TOP2BQ02880 1626 aa25.45■■□□□ 1.67
SFXN2-206ENST00000602544 ABCA10Q8WWZ4 1543 aa25.44■■□□□ 1.66
SFXN2-206ENST00000602544 WDR97A6NE52 1622 aa25.44■■□□□ 1.66
SFXN2-206ENST00000602544 SYNJ1O43426 1573 aa25.44■■□□□ 1.66
SFXN2-206ENST00000602544 GRIN2BQ13224 1484 aa25.43■■□□□ 1.66
SFXN2-206ENST00000602544 CHMP7Q8WUX9 453 aaPredicted RBP25.43■■□□□ 1.66
SFXN2-206ENST00000602544 GAPVD1Q14C86 1478 aa25.41■■□□□ 1.66
SFXN2-206ENST00000602544 BIVM-ERCC5R4GMW8 1640 aa25.39■■□□□ 1.66
SFXN2-206ENST00000602544 SNAPC4Q5SXM2 1469 aa25.39■■□□□ 1.65
SFXN2-206ENST00000602544 MAGI1Q96QZ7 1491 aaPredicted RBP25.34■■□□□ 1.65
SFXN2-206ENST00000602544 SYNJ2O15056 1496 aa25.25■■□□□ 1.63
SFXN2-206ENST00000602544 ABCA5Q8WWZ7 1642 aa25.24■■□□□ 1.63
SFXN2-206ENST00000602544 TRIM41Q8WV44 630 aa25.22■■□□□ 1.63
SFXN2-206ENST00000602544 CHD1O14646 1710 aa25.2■■□□□ 1.62
SFXN2-206ENST00000602544 PBRM1Q86U86 1689 aa25.17■■□□□ 1.62
SFXN2-206ENST00000602544 KIF27Q86VH2 1401 aa25.14■■□□□ 1.62
SFXN2-206ENST00000602544 FHAD1B1AJZ9 1412 aa25.13■■□□□ 1.61
SFXN2-206ENST00000602544 ERICH3Q5RHP9 1530 aa25.12■■□□□ 1.61
SFXN2-206ENST00000602544 GRIN2AQ12879 1464 aa25.06■■□□□ 1.6
SFXN2-206ENST00000602544 ARHGEF11O15085 1522 aa25.06■■□□□ 1.6
SFXN2-206ENST00000602544 ADAMTS12P58397 1594 aa25.05■■□□□ 1.6
SFXN2-206ENST00000602544 IGF1RP08069 1367 aa25.03■■□□□ 1.6
SFXN2-206ENST00000602544 CYB5RLQ6IPT4 315 aa25.02■■□□□ 1.6
SFXN2-206ENST00000602544 RIMBP3CA6NJZ7 1639 aa25.01■■□□□ 1.59
SFXN2-206ENST00000602544 RIMBP3BA6NNM3 1639 aa25.01■■□□□ 1.59
SFXN2-206ENST00000602544 RIMBP3Q9UFD9 1639 aa25.01■■□□□ 1.59
SFXN2-206ENST00000602544 CLASP1Q7Z460 1538 aa24.98■■□□□ 1.59
SFXN2-206ENST00000602544 NUP160Q12769 1436 aa24.94■■□□□ 1.58
SFXN2-206ENST00000602544 CARMIL1Q5VZK9 1371 aa24.92■■□□□ 1.58
SFXN2-206ENST00000602544 CEP170Q5SW79 1584 aa24.87■■□□□ 1.57
SFXN2-206ENST00000602544 ARAP1Q96P48 1450 aa24.84■■□□□ 1.57
SFXN2-206ENST00000602544 JPH4Q96JJ6 628 aa24.84■■□□□ 1.57
SFXN2-206ENST00000602544 CUL7Q14999 1698 aa24.82■■□□□ 1.56
SFXN2-206ENST00000602544 RUSC2Q8N2Y8 1516 aa24.77■■□□□ 1.56
SFXN2-206ENST00000602544 PRG4Q92954 1404 aaPredicted RBP24.74■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms