RNA–Protein interactions for RNA: ENST00000602155.5

PRKD2-217, Transcript of protein kinase D2, humanhuman

TSL 2

Gene PRKD2, Length 1,043 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKD2-217ENST00000602155 NISCHQ9Y2I1 1504 aa32.63■■■□□ 2.81
PRKD2-217ENST00000602155 ABCC9O60706 1549 aa29.53■■■□□ 2.32
PRKD2-217ENST00000602155 DNAJC5BQ9UF47 199 aa29.1■■■□□ 2.25
PRKD2-217ENST00000602155 CCDC180Q9P1Z9 1646 aa29.02■■■□□ 2.24
PRKD2-217ENST00000602155 DNAJC5Q9H3Z4 198 aa27.76■■■□□ 2.03
PRKD2-217ENST00000602155 RB1CC1Q8TDY2 1594 aa27.67■■■□□ 2.02
PRKD2-217ENST00000602155 DCAF8L2P0C7V8 631 aa27.64■■■□□ 2.02
PRKD2-217ENST00000602155 NACADO15069 1562 aa27.46■■□□□ 1.99
PRKD2-217ENST00000602155 PABPN1Q86U42 306 aaKnown RBP eCLIP27.3■■□□□ 1.96
PRKD2-217ENST00000602155 UNC13AQ9UPW8 1703 aa27.13■■□□□ 1.93
PRKD2-217ENST00000602155 MYO15BQ96JP2 1530 aa27.12■■□□□ 1.93
PRKD2-217ENST00000602155 ZCCHC6Q5VYS8 1495 aaKnown RBP27.09■■□□□ 1.93
PRKD2-217ENST00000602155 BICRAQ9NZM4 1560 aa26.92■■□□□ 1.9
PRKD2-217ENST00000602155 DCAF1Q9Y4B6 1507 aa26.88■■□□□ 1.89
PRKD2-217ENST00000602155 CECR2Q9BXF3 1484 aa26.74■■□□□ 1.87
PRKD2-217ENST00000602155 SCRIBQ14160 1630 aa26.64■■□□□ 1.85
PRKD2-217ENST00000602155 CC2D2AQ9P2K1 1620 aa26.57■■□□□ 1.84
PRKD2-217ENST00000602155 SHROOM4Q9ULL8 1493 aa26.45■■□□□ 1.82
PRKD2-217ENST00000602155 EIF4G1Q04637 1599 aaKnown RBP26.29■■□□□ 1.8
PRKD2-217ENST00000602155 CUX2O14529 1486 aa26.01■■□□□ 1.75
PRKD2-217ENST00000602155 TRIM41Q8WV44 630 aa25.93■■□□□ 1.74
PRKD2-217ENST00000602155 ERCC6Q03468 1493 aa25.56■■□□□ 1.68
PRKD2-217ENST00000602155 NCAPD3P42695 1498 aa25.42■■□□□ 1.66
PRKD2-217ENST00000602155 ATAD2BQ9ULI0 1458 aa25.41■■□□□ 1.66
PRKD2-217ENST00000602155 SMARCA4P51532 1647 aa25.37■■□□□ 1.65
PRKD2-217ENST00000602155 BAZ1AQ9NRL2 1556 aaPredicted RBP25.27■■□□□ 1.64
PRKD2-217ENST00000602155 SMARCA2P51531 1590 aa25.26■■□□□ 1.63
PRKD2-217ENST00000602155 MROH2BQ7Z745 1585 aa25.2■■□□□ 1.62
PRKD2-217ENST00000602155 HMGXB3Q12766 1538 aa25.18■■□□□ 1.62
PRKD2-217ENST00000602155 BAZ1BQ9UIG0 1483 aaKnown RBP25.15■■□□□ 1.62
PRKD2-217ENST00000602155 PEG3Q9GZU2 1588 aa25.07■■□□□ 1.6
PRKD2-217ENST00000602155 NESP48681 1621 aa25.06■■□□□ 1.6
PRKD2-217ENST00000602155 THOC2Q8NI27 1593 aaKnown RBP24.96■■□□□ 1.59
PRKD2-217ENST00000602155 WIZO95785 1651 aa24.86■■□□□ 1.57
PRKD2-217ENST00000602155 RSF1Q96T23 1441 aaPredicted RBP24.78■■□□□ 1.56
PRKD2-217ENST00000602155 LAMC3Q9Y6N6 1575 aa24.77■■□□□ 1.56
PRKD2-217ENST00000602155 KIF21AQ7Z4S6 1674 aa24.77■■□□□ 1.56
PRKD2-217ENST00000602155 AEBP2Q6ZN18 517 aaPredicted RBP24.74■■□□□ 1.55
PRKD2-217ENST00000602155 CADPSQ9ULU8 1353 aa24.7■■□□□ 1.55
PRKD2-217ENST00000602155 PDS5BQ9NTI5 1447 aa24.66■■□□□ 1.54
PRKD2-217ENST00000602155 OSCARQ8IYS5 282 aa24.62■■□□□ 1.53
PRKD2-217ENST00000602155 TOP2AP11388 1531 aaKnown RBP24.54■■□□□ 1.52
PRKD2-217ENST00000602155 MRC2Q9UBG0 1479 aa24.46■■□□□ 1.51
PRKD2-217ENST00000602155 RIMBP3CA6NJZ7 1639 aa24.45■■□□□ 1.5
PRKD2-217ENST00000602155 RIMBP3BA6NNM3 1639 aa24.45■■□□□ 1.5
PRKD2-217ENST00000602155 RIMBP3Q9UFD9 1639 aa24.45■■□□□ 1.5
PRKD2-217ENST00000602155 WDR62O43379 1518 aa24.45■■□□□ 1.5
PRKD2-217ENST00000602155 CFTRP13569 1480 aa24.44■■□□□ 1.5
PRKD2-217ENST00000602155 FANCD2Q9BXW9 1451 aa24.41■■□□□ 1.5
PRKD2-217ENST00000602155 CEP164Q9UPV0 1460 aa24.38■■□□□ 1.49
PRKD2-217ENST00000602155 TRHP20396 242 aaPredicted RBP24.37■■□□□ 1.49
PRKD2-217ENST00000602155 CCDC88BA6NC98 1476 aa24.34■■□□□ 1.49
PRKD2-217ENST00000602155 ARHGEF11O15085 1522 aa24.22■■□□□ 1.47
PRKD2-217ENST00000602155 URB2Q14146 1524 aaKnown RBP24.2■■□□□ 1.47
PRKD2-217ENST00000602155 CYB5RLQ6IPT4 315 aa24.17■■□□□ 1.46
PRKD2-217ENST00000602155 ILDR1Q86SU0 546 aaPredicted RBP24.01■■□□□ 1.43
PRKD2-217ENST00000602155 PRDM2Q13029 1718 aa23.98■■□□□ 1.43
PRKD2-217ENST00000602155 SUPT5HO00267 1087 aaKnown RBP23.97■■□□□ 1.43
PRKD2-217ENST00000602155 TOPBP1Q92547 1522 aa23.96■■□□□ 1.43
PRKD2-217ENST00000602155 ZNF608Q9ULD9 1512 aaPredicted RBP23.91■■□□□ 1.42
PRKD2-217ENST00000602155 ARAP1Q96P48 1450 aa23.88■■□□□ 1.41
PRKD2-217ENST00000602155 IFT140Q96RY7 1462 aa23.88■■□□□ 1.41
PRKD2-217ENST00000602155 DNMBPQ6XZF7 1577 aa23.84■■□□□ 1.41
PRKD2-217ENST00000602155 ABCC8Q09428 1581 aa23.83■■□□□ 1.41
PRKD2-217ENST00000602155 POLA1P09884 1462 aaPredicted RBP23.75■■□□□ 1.39
PRKD2-217ENST00000602155 AQRO60306 1485 aaKnown RBP eCLIP23.74■■□□□ 1.391e-7■■■□□ 17
PRKD2-217ENST00000602155 RAD54L2Q9Y4B4 1467 aa23.72■■□□□ 1.39
PRKD2-217ENST00000602155 EIF4G3O43432 1585 aaKnown RBP23.72■■□□□ 1.39
PRKD2-217ENST00000602155 TARBP1Q13395 1621 aaKnown RBP23.67■■□□□ 1.38
PRKD2-217ENST00000602155 SOGA1O94964 1423 aa23.67■■□□□ 1.38
PRKD2-217ENST00000602155 CHD1O14646 1710 aa23.66■■□□□ 1.38
PRKD2-217ENST00000602155 CUX1P39880 1505 aa23.65■■□□□ 1.38
PRKD2-217ENST00000602155 TDRD9Q8NDG6 1382 aaKnown RBP23.65■■□□□ 1.38
PRKD2-217ENST00000602155 FGD5Q6ZNL6 1462 aa23.63■■□□□ 1.37
PRKD2-217ENST00000602155 FBLN2P98095 1184 aa23.58■■□□□ 1.37
PRKD2-217ENST00000602155 SNAPC4Q5SXM2 1469 aa23.46■■□□□ 1.35
PRKD2-217ENST00000602155 CHMP7Q8WUX9 453 aaPredicted RBP23.39■■□□□ 1.33
PRKD2-217ENST00000602155 GRIN2BQ13224 1484 aa23.38■■□□□ 1.33
PRKD2-217ENST00000602155 GAPVD1Q14C86 1478 aa23.35■■□□□ 1.33
PRKD2-217ENST00000602155 WRNQ14191 1432 aaPredicted RBP eCLIP23.34■■□□□ 1.33
PRKD2-217ENST00000602155 ABCA10Q8WWZ4 1543 aa23.34■■□□□ 1.33
PRKD2-217ENST00000602155 CLASP1Q7Z460 1538 aa23.33■■□□□ 1.33
PRKD2-217ENST00000602155 WDR97A6NE52 1622 aa23.33■■□□□ 1.33
PRKD2-217ENST00000602155 MAGI1Q96QZ7 1491 aaPredicted RBP23.32■■□□□ 1.32
PRKD2-217ENST00000602155 SYNJ1O43426 1573 aa23.3■■□□□ 1.32
PRKD2-217ENST00000602155 SYNJ2O15056 1496 aa23.27■■□□□ 1.32
PRKD2-217ENST00000602155 TOP2BQ02880 1626 aa23.25■■□□□ 1.31
PRKD2-217ENST00000602155 ABCA5Q8WWZ7 1642 aa23.24■■□□□ 1.31
PRKD2-217ENST00000602155 BIVM-ERCC5R4GMW8 1640 aa23.21■■□□□ 1.31
PRKD2-217ENST00000602155 PBRM1Q86U86 1689 aa23.2■■□□□ 1.3
PRKD2-217ENST00000602155 KDM4FA0A1W2PPD8 638 aa23.2■■□□□ 1.3
PRKD2-217ENST00000602155 GRIN2AQ12879 1464 aa23.09■■□□□ 1.29
PRKD2-217ENST00000602155 ADAMTS12P58397 1594 aa23.07■■□□□ 1.28
PRKD2-217ENST00000602155 FHAD1B1AJZ9 1412 aa23.06■■□□□ 1.28
PRKD2-217ENST00000602155 NUP160Q12769 1436 aa23.01■■□□□ 1.27
PRKD2-217ENST00000602155 ERICH3Q5RHP9 1530 aa23.01■■□□□ 1.27
PRKD2-217ENST00000602155 CEP170Q5SW79 1584 aa23■■□□□ 1.27
PRKD2-217ENST00000602155 ERCC6L2Q5T890 1561 aa22.96■■□□□ 1.27
PRKD2-217ENST00000602155 KIF13AQ9H1H9 1805 aa22.94■■□□□ 1.26
PRKD2-217ENST00000602155 IGF1RP08069 1367 aa22.9■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms