RNA–Protein interactions for RNA: ENST00000601785.5

CD33-207, Transcript of CD33 molecule, humanhuman

TSL 5

Gene CD33, Length 1,522 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD33-207ENST00000601785 NISCHQ9Y2I1 1504 aa45.77■■■■■ 4.92
CD33-207ENST00000601785 CCDC180Q9P1Z9 1646 aa40.04■■■■■ 4
CD33-207ENST00000601785 ZCCHC6Q5VYS8 1495 aaKnown RBP38.43■■■■□ 3.74
CD33-207ENST00000601785 DCAF1Q9Y4B6 1507 aa37.96■■■■□ 3.67
CD33-207ENST00000601785 ABCC9O60706 1549 aa37.77■■■■□ 3.64
CD33-207ENST00000601785 DCAF8L2P0C7V8 631 aa37.7■■■■□ 3.63
CD33-207ENST00000601785 MYO15BQ96JP2 1530 aa37.59■■■■□ 3.61
CD33-207ENST00000601785 NACADO15069 1562 aa37.33■■■■□ 3.57
CD33-207ENST00000601785 SHROOM4Q9ULL8 1493 aa37.06■■■■□ 3.52
CD33-207ENST00000601785 RB1CC1Q8TDY2 1594 aa37.01■■■■□ 3.51
CD33-207ENST00000601785 SCRIBQ14160 1630 aa36.64■■■■□ 3.46
CD33-207ENST00000601785 UNC13AQ9UPW8 1703 aa36.09■■■■□ 3.37
CD33-207ENST00000601785 BICRAQ9NZM4 1560 aa35.78■■■■□ 3.32
CD33-207ENST00000601785 SUPT5HO00267 1087 aaKnown RBP35.67■■■■□ 3.3
CD33-207ENST00000601785 PABPN1Q86U42 306 aaKnown RBP eCLIP35.56■■■■□ 3.28
CD33-207ENST00000601785 CECR2Q9BXF3 1484 aa35.46■■■■□ 3.27
CD33-207ENST00000601785 RSF1Q96T23 1441 aaPredicted RBP35.44■■■■□ 3.26
CD33-207ENST00000601785 BAZ1AQ9NRL2 1556 aaPredicted RBP35.4■■■■□ 3.26
CD33-207ENST00000601785 MROH2BQ7Z745 1585 aa35.28■■■■□ 3.24
CD33-207ENST00000601785 SMARCA4P51532 1647 aa35.19■■■■□ 3.22
CD33-207ENST00000601785 WIZO95785 1651 aa34.96■■■■□ 3.19
CD33-207ENST00000601785 PEG3Q9GZU2 1588 aa34.84■■■■□ 3.17
CD33-207ENST00000601785 EIF4G1Q04637 1599 aaKnown RBP34.75■■■■□ 3.15
CD33-207ENST00000601785 TOP2AP11388 1531 aaKnown RBP34.71■■■■□ 3.15
CD33-207ENST00000601785 SMARCA2P51531 1590 aa34.71■■■■□ 3.15
CD33-207ENST00000601785 ATAD2BQ9ULI0 1458 aa34.65■■■■□ 3.14
CD33-207ENST00000601785 BAZ1BQ9UIG0 1483 aaKnown RBP34.47■■■■□ 3.11
CD33-207ENST00000601785 NCAPD3P42695 1498 aa34.42■■■■□ 3.1
CD33-207ENST00000601785 HMGXB3Q12766 1538 aa34.38■■■■□ 3.09
CD33-207ENST00000601785 DNAJC5BQ9UF47 199 aa34.31■■■■□ 3.08
CD33-207ENST00000601785 CCDC88BA6NC98 1476 aa34.29■■■■□ 3.08
CD33-207ENST00000601785 CC2D2AQ9P2K1 1620 aa34.22■■■■□ 3.07
CD33-207ENST00000601785 CHIC1Q5VXU3 224 aa34.14■■■■□ 3.06
CD33-207ENST00000601785 TRIM41Q8WV44 630 aa33.66■■■□□ 2.98
CD33-207ENST00000601785 CFTRP13569 1480 aa33.61■■■□□ 2.97
CD33-207ENST00000601785 CADPSQ9ULU8 1353 aa33.51■■■□□ 2.96
CD33-207ENST00000601785 ABCC8Q09428 1581 aa33.46■■■□□ 2.95
CD33-207ENST00000601785 PRDM2Q13029 1718 aa33.42■■■□□ 2.94
CD33-207ENST00000601785 WRNQ14191 1432 aaPredicted RBP eCLIP33.39■■■□□ 2.94
CD33-207ENST00000601785 LAMC3Q9Y6N6 1575 aa33.28■■■□□ 2.92
CD33-207ENST00000601785 SYNJ1O43426 1573 aa33.17■■■□□ 2.9
CD33-207ENST00000601785 TOP2BQ02880 1626 aa33.13■■■□□ 2.89
CD33-207ENST00000601785 FANCD2Q9BXW9 1451 aa33.11■■■□□ 2.89
CD33-207ENST00000601785 BIVM-ERCC5R4GMW8 1640 aa33.1■■■□□ 2.89
CD33-207ENST00000601785 NESP48681 1621 aa33.09■■■□□ 2.89
CD33-207ENST00000601785 PDS5BQ9NTI5 1447 aa33.04■■■□□ 2.88
CD33-207ENST00000601785 CUX1P39880 1505 aa33.01■■■□□ 2.88
CD33-207ENST00000601785 EEA1Q15075 1411 aa32.98■■■□□ 2.87
CD33-207ENST00000601785 CEP164Q9UPV0 1460 aa32.94■■■□□ 2.86
CD33-207ENST00000601785 FAM9AQ8IZU1 332 aaPredicted RBP32.88■■■□□ 2.85
CD33-207ENST00000601785 SOGA1O94964 1423 aa32.84■■■□□ 2.85
CD33-207ENST00000601785 DNMBPQ6XZF7 1577 aa32.83■■■□□ 2.85
CD33-207ENST00000601785 KIF21AQ7Z4S6 1674 aa32.74■■■□□ 2.83
CD33-207ENST00000601785 TOPBP1Q92547 1522 aa32.73■■■□□ 2.83
CD33-207ENST00000601785 LOC105371045A0A1W2PR82 267 aa32.72■■■□□ 2.83
CD33-207ENST00000601785 CSRNP3Q8WYN3 585 aa32.69■■■□□ 2.82
CD33-207ENST00000601785 FGD5Q6ZNL6 1462 aa32.69■■■□□ 2.82
CD33-207ENST00000601785 RUSC2Q8N2Y8 1516 aa32.66■■■□□ 2.82
CD33-207ENST00000601785 URB2Q14146 1524 aaKnown RBP32.65■■■□□ 2.82
CD33-207ENST00000601785 KIF27Q86VH2 1401 aa32.61■■■□□ 2.81
CD33-207ENST00000601785 MRC2Q9UBG0 1479 aa32.58■■■□□ 2.81
CD33-207ENST00000601785 POLA1P09884 1462 aaPredicted RBP32.55■■■□□ 2.8
CD33-207ENST00000601785 ERCC6Q03468 1493 aa32.49■■■□□ 2.79
CD33-207ENST00000601785 CUX2O14529 1486 aa32.46■■■□□ 2.79
CD33-207ENST00000601785 KIF21BO75037 1637 aa32.46■■■□□ 2.79
CD33-207ENST00000601785 ABCA10Q8WWZ4 1543 aa32.45■■■□□ 2.79
CD33-207ENST00000601785 GOLGA3Q08378 1498 aa32.43■■■□□ 2.78
CD33-207ENST00000601785 WDR62O43379 1518 aa32.41■■■□□ 2.78
CD33-207ENST00000601785 RAD54L2Q9Y4B4 1467 aa32.38■■■□□ 2.77
CD33-207ENST00000601785 EHMT2Q96KQ7 1210 aa32.31■■■□□ 2.76
CD33-207ENST00000601785 PRXQ9BXM0 1461 aa32.31■■■□□ 2.76
CD33-207ENST00000601785 WDR97A6NE52 1622 aa32.31■■■□□ 2.76
CD33-207ENST00000601785 TNIKQ9UKE5 1360 aa32.31■■■□□ 2.76
CD33-207ENST00000601785 ERICH3Q5RHP9 1530 aa32.3■■■□□ 2.76
CD33-207ENST00000601785 THOC2Q8NI27 1593 aaKnown RBP32.27■■■□□ 2.76
CD33-207ENST00000601785 IGF1RP08069 1367 aa32.26■■■□□ 2.75
CD33-207ENST00000601785 TARBP1Q13395 1621 aaKnown RBP32.24■■■□□ 2.75
CD33-207ENST00000601785 UBTFP17480 764 aaKnown RBP32.23■■■□□ 2.75
CD33-207ENST00000601785 RAPGEF2Q9Y4G8 1499 aa32.2■■■□□ 2.75
CD33-207ENST00000601785 IFT140Q96RY7 1462 aa32.2■■■□□ 2.74
CD33-207ENST00000601785 ABCA5Q8WWZ7 1642 aa32.16■■■□□ 2.74
CD33-207ENST00000601785 GAPVD1Q14C86 1478 aa32.12■■■□□ 2.73
CD33-207ENST00000601785 CARMIL1Q5VZK9 1371 aa32.12■■■□□ 2.73
CD33-207ENST00000601785 TDRD9Q8NDG6 1382 aaKnown RBP32.1■■■□□ 2.73
CD33-207ENST00000601785 CUL7Q14999 1698 aa32.09■■■□□ 2.73
CD33-207ENST00000601785 CEP162Q5TB80 1403 aa32.07■■■□□ 2.72
CD33-207ENST00000601785 GRIN2BQ13224 1484 aa31.92■■■□□ 2.7
CD33-207ENST00000601785 PBRM1Q86U86 1689 aa31.9■■■□□ 2.7
CD33-207ENST00000601785 AQRO60306 1485 aaKnown RBP eCLIP31.9■■■□□ 2.75e-9■■■■■ 35.2
CD33-207ENST00000601785 CLIP1P30622 1438 aa31.87■■■□□ 2.69
CD33-207ENST00000601785 ZNF608Q9ULD9 1512 aaPredicted RBP31.87■■■□□ 2.69
CD33-207ENST00000601785 EIF4G3O43432 1585 aaKnown RBP31.82■■■□□ 2.68
CD33-207ENST00000601785 FHAD1B1AJZ9 1412 aa31.81■■■□□ 2.68
CD33-207ENST00000601785 ADAMTS12P58397 1594 aa31.76■■■□□ 2.67
CD33-207ENST00000601785 MAGI1Q96QZ7 1491 aaPredicted RBP31.68■■■□□ 2.66
CD33-207ENST00000601785 CTTNBP2Q8WZ74 1663 aa31.65■■■□□ 2.66
CD33-207ENST00000601785 SNAPC4Q5SXM2 1469 aa31.65■■■□□ 2.66
CD33-207ENST00000601785 VPS8Q8N3P4 1428 aa31.6■■■□□ 2.65
CD33-207ENST00000601785 RANGAP1P46060 587 aaPredicted RBP31.58■■■□□ 2.65
CD33-207ENST00000601785 ARHGAP35Q9NRY4 1499 aa31.55■■■□□ 2.64
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms