RNA–Protein interactions for RNA: ENST00000601354.1

COLGALT1-206, Transcript of collagen beta(1-O)galactosyltransferase 1, humanhuman

TSL 5

Gene COLGALT1, Length 546 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLGALT1-206ENST00000601354 NISCHQ9Y2I1 1504 aa27.65■■■□□ 2.02
COLGALT1-206ENST00000601354 CCDC180Q9P1Z9 1646 aa24.27■■□□□ 1.48
COLGALT1-206ENST00000601354 ZCCHC6Q5VYS8 1495 aaKnown RBP23.23■■□□□ 1.31
COLGALT1-206ENST00000601354 DCAF1Q9Y4B6 1507 aa22.92■■□□□ 1.26
COLGALT1-206ENST00000601354 ABCC9O60706 1549 aa22.88■■□□□ 1.25
COLGALT1-206ENST00000601354 MYO15BQ96JP2 1530 aa22.7■■□□□ 1.22
COLGALT1-206ENST00000601354 DCAF8L2P0C7V8 631 aa22.68■■□□□ 1.22
COLGALT1-206ENST00000601354 NACADO15069 1562 aa22.57■■□□□ 1.2
COLGALT1-206ENST00000601354 RB1CC1Q8TDY2 1594 aa22.4■■□□□ 1.18
COLGALT1-206ENST00000601354 SHROOM4Q9ULL8 1493 aa22.32■■□□□ 1.16
COLGALT1-206ENST00000601354 SCRIBQ14160 1630 aa22.19■■□□□ 1.14
COLGALT1-206ENST00000601354 UNC13AQ9UPW8 1703 aa22■■□□□ 1.11
COLGALT1-206ENST00000601354 DNAJC5BQ9UF47 199 aa21.84■■□□□ 1.09
COLGALT1-206ENST00000601354 BICRAQ9NZM4 1560 aa21.73■■□□□ 1.07
COLGALT1-206ENST00000601354 PABPN1Q86U42 306 aaKnown RBP eCLIP21.49■■□□□ 1.03
COLGALT1-206ENST00000601354 CECR2Q9BXF3 1484 aa21.45■■□□□ 1.02
COLGALT1-206ENST00000601354 SUPT5HO00267 1087 aaKnown RBP21.4■■□□□ 1.02
COLGALT1-206ENST00000601354 BAZ1AQ9NRL2 1556 aaPredicted RBP21.37■■□□□ 1.01
COLGALT1-206ENST00000601354 RSF1Q96T23 1441 aaPredicted RBP21.37■■□□□ 1.01
COLGALT1-206ENST00000601354 MROH2BQ7Z745 1585 aa21.34■■□□□ 1.01
COLGALT1-206ENST00000601354 SMARCA4P51532 1647 aa21.31■■□□□ 1
COLGALT1-206ENST00000601354 WIZO95785 1651 aa21.18■□□□□ 0.98
COLGALT1-206ENST00000601354 PEG3Q9GZU2 1588 aa21.08■□□□□ 0.97
COLGALT1-206ENST00000601354 EIF4G1Q04637 1599 aaKnown RBP21.06■□□□□ 0.96
COLGALT1-206ENST00000601354 TOP2AP11388 1531 aaKnown RBP20.98■□□□□ 0.95
COLGALT1-206ENST00000601354 SMARCA2P51531 1590 aa20.97■□□□□ 0.95
COLGALT1-206ENST00000601354 ATAD2BQ9ULI0 1458 aa20.94■□□□□ 0.94
COLGALT1-206ENST00000601354 BAZ1BQ9UIG0 1483 aaKnown RBP20.81■□□□□ 0.92
COLGALT1-206ENST00000601354 HMGXB3Q12766 1538 aa20.8■□□□□ 0.92
COLGALT1-206ENST00000601354 NCAPD3P42695 1498 aa20.8■□□□□ 0.92
COLGALT1-206ENST00000601354 CC2D2AQ9P2K1 1620 aa20.77■□□□□ 0.92
COLGALT1-206ENST00000601354 CCDC88BA6NC98 1476 aa20.7■□□□□ 0.9
COLGALT1-206ENST00000601354 DNAJC5Q9H3Z4 198 aa20.68■□□□□ 0.9
COLGALT1-206ENST00000601354 CHIC1Q5VXU3 224 aa20.49■□□□□ 0.87
COLGALT1-206ENST00000601354 PRDM2Q13029 1718 aa20.32■□□□□ 0.84
COLGALT1-206ENST00000601354 CFTRP13569 1480 aa20.3■□□□□ 0.84
COLGALT1-206ENST00000601354 ABCC8Q09428 1581 aa20.23■□□□□ 0.83
COLGALT1-206ENST00000601354 CADPSQ9ULU8 1353 aa20.21■□□□□ 0.83
COLGALT1-206ENST00000601354 TRIM41Q8WV44 630 aa20.17■□□□□ 0.82
COLGALT1-206ENST00000601354 LAMC3Q9Y6N6 1575 aa20.14■□□□□ 0.81
COLGALT1-206ENST00000601354 WRNQ14191 1432 aaPredicted RBP eCLIP20.11■□□□□ 0.81
COLGALT1-206ENST00000601354 SYNJ1O43426 1573 aa20.08■□□□□ 0.8
COLGALT1-206ENST00000601354 NESP48681 1621 aa20.07■□□□□ 0.8
COLGALT1-206ENST00000601354 BIVM-ERCC5R4GMW8 1640 aa20.05■□□□□ 0.8
COLGALT1-206ENST00000601354 TOP2BQ02880 1626 aa20.02■□□□□ 0.8
COLGALT1-206ENST00000601354 FANCD2Q9BXW9 1451 aa20■□□□□ 0.79
COLGALT1-206ENST00000601354 CUX1P39880 1505 aa19.97■□□□□ 0.79
COLGALT1-206ENST00000601354 KIF21AQ7Z4S6 1674 aa19.92■□□□□ 0.78
COLGALT1-206ENST00000601354 PDS5BQ9NTI5 1447 aa19.92■□□□□ 0.78
COLGALT1-206ENST00000601354 CUX2O14529 1486 aa19.91■□□□□ 0.78
COLGALT1-206ENST00000601354 CEP164Q9UPV0 1460 aa19.9■□□□□ 0.78
COLGALT1-206ENST00000601354 DNMBPQ6XZF7 1577 aa19.86■□□□□ 0.77
COLGALT1-206ENST00000601354 EEA1Q15075 1411 aa19.8■□□□□ 0.76
COLGALT1-206ENST00000601354 TOPBP1Q92547 1522 aa19.8■□□□□ 0.76
COLGALT1-206ENST00000601354 SOGA1O94964 1423 aa19.79■□□□□ 0.76
COLGALT1-206ENST00000601354 URB2Q14146 1524 aaKnown RBP19.77■□□□□ 0.76
COLGALT1-206ENST00000601354 FGD5Q6ZNL6 1462 aa19.76■□□□□ 0.75
COLGALT1-206ENST00000601354 ERCC6Q03468 1493 aa19.75■□□□□ 0.75
COLGALT1-206ENST00000601354 FAM9AQ8IZU1 332 aaPredicted RBP19.74■□□□□ 0.75
COLGALT1-206ENST00000601354 RUSC2Q8N2Y8 1516 aa19.73■□□□□ 0.75
COLGALT1-206ENST00000601354 MRC2Q9UBG0 1479 aa19.71■□□□□ 0.75
COLGALT1-206ENST00000601354 POLA1P09884 1462 aaPredicted RBP19.68■□□□□ 0.74
COLGALT1-206ENST00000601354 LOC105371045A0A1W2PR82 267 aa19.64■□□□□ 0.73
COLGALT1-206ENST00000601354 WDR97A6NE52 1622 aa19.64■□□□□ 0.73
COLGALT1-206ENST00000601354 WDR62O43379 1518 aa19.63■□□□□ 0.73
COLGALT1-206ENST00000601354 THOC2Q8NI27 1593 aaKnown RBP19.62■□□□□ 0.73
COLGALT1-206ENST00000601354 CSRNP3Q8WYN3 585 aa19.62■□□□□ 0.73
COLGALT1-206ENST00000601354 KIF27Q86VH2 1401 aa19.61■□□□□ 0.73
COLGALT1-206ENST00000601354 ABCA10Q8WWZ4 1543 aa19.6■□□□□ 0.73
COLGALT1-206ENST00000601354 KIF21BO75037 1637 aa19.58■□□□□ 0.73
COLGALT1-206ENST00000601354 RAD54L2Q9Y4B4 1467 aa19.58■□□□□ 0.72
COLGALT1-206ENST00000601354 TARBP1Q13395 1621 aaKnown RBP19.55■□□□□ 0.72
COLGALT1-206ENST00000601354 GOLGA3Q08378 1498 aa19.5■□□□□ 0.71
COLGALT1-206ENST00000601354 ABCA5Q8WWZ7 1642 aa19.49■□□□□ 0.71
COLGALT1-206ENST00000601354 PRXQ9BXM0 1461 aa19.48■□□□□ 0.71
COLGALT1-206ENST00000601354 ERICH3Q5RHP9 1530 aa19.47■□□□□ 0.71
COLGALT1-206ENST00000601354 IFT140Q96RY7 1462 aa19.45■□□□□ 0.7
COLGALT1-206ENST00000601354 IGF1RP08069 1367 aa19.43■□□□□ 0.7
COLGALT1-206ENST00000601354 RAPGEF2Q9Y4G8 1499 aa19.41■□□□□ 0.7
COLGALT1-206ENST00000601354 EHMT2Q96KQ7 1210 aa19.41■□□□□ 0.7
COLGALT1-206ENST00000601354 TNIKQ9UKE5 1360 aa19.41■□□□□ 0.7
COLGALT1-206ENST00000601354 CUL7Q14999 1698 aa19.4■□□□□ 0.7
COLGALT1-206ENST00000601354 GAPVD1Q14C86 1478 aa19.39■□□□□ 0.69
COLGALT1-206ENST00000601354 PBRM1Q86U86 1689 aa19.38■□□□□ 0.69
COLGALT1-206ENST00000601354 TDRD9Q8NDG6 1382 aaKnown RBP19.37■□□□□ 0.69
COLGALT1-206ENST00000601354 CARMIL1Q5VZK9 1371 aa19.33■□□□□ 0.69
COLGALT1-206ENST00000601354 UBTFP17480 764 aaKnown RBP19.31■□□□□ 0.68
COLGALT1-206ENST00000601354 ZNF608Q9ULD9 1512 aaPredicted RBP19.3■□□□□ 0.68
COLGALT1-206ENST00000601354 EIF4G3O43432 1585 aaKnown RBP19.3■□□□□ 0.68
COLGALT1-206ENST00000601354 AQRO60306 1485 aaKnown RBP eCLIP19.28■□□□□ 0.681e-6■■■■□ 24.8
COLGALT1-206ENST00000601354 CEP162Q5TB80 1403 aa19.27■□□□□ 0.68
COLGALT1-206ENST00000601354 GRIN2BQ13224 1484 aa19.27■□□□□ 0.67
COLGALT1-206ENST00000601354 ADAMTS12P58397 1594 aa19.23■□□□□ 0.67
COLGALT1-206ENST00000601354 CTTNBP2Q8WZ74 1663 aa19.19■□□□□ 0.66
COLGALT1-206ENST00000601354 FHAD1B1AJZ9 1412 aa19.18■□□□□ 0.66
COLGALT1-206ENST00000601354 CLIP1P30622 1438 aa19.16■□□□□ 0.66
COLGALT1-206ENST00000601354 SNAPC4Q5SXM2 1469 aa19.14■□□□□ 0.65
COLGALT1-206ENST00000601354 MAGI1Q96QZ7 1491 aaPredicted RBP19.13■□□□□ 0.65
COLGALT1-206ENST00000601354 SYNJ2O15056 1496 aa19.04■□□□□ 0.64
COLGALT1-206ENST00000601354 GRIN2AQ12879 1464 aa19.03■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 71.5 ms