RNA–Protein interactions for RNA: ENST00000600898.1

USF2-214, Transcript of upstream transcription factor 2, c-fos interacting, humanhuman

TSL 2

Gene USF2, Length 848 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF2-214ENST00000600898 NISCHQ9Y2I1 1504 aa36.08■■■■□ 3.37
USF2-214ENST00000600898 CCDC180Q9P1Z9 1646 aa31.65■■■□□ 2.66
USF2-214ENST00000600898 ABCC9O60706 1549 aa30.47■■■□□ 2.47
USF2-214ENST00000600898 ZCCHC6Q5VYS8 1495 aaKnown RBP30.2■■■□□ 2.43
USF2-214ENST00000600898 DCAF8L2P0C7V8 631 aa29.91■■■□□ 2.38
USF2-214ENST00000600898 DCAF1Q9Y4B6 1507 aa29.76■■■□□ 2.36
USF2-214ENST00000600898 NACADO15069 1562 aa29.58■■■□□ 2.33
USF2-214ENST00000600898 MYO15BQ96JP2 1530 aa29.57■■■□□ 2.32
USF2-214ENST00000600898 RB1CC1Q8TDY2 1594 aa29.44■■■□□ 2.3
USF2-214ENST00000600898 SHROOM4Q9ULL8 1493 aa29.13■■■□□ 2.25
USF2-214ENST00000600898 SCRIBQ14160 1630 aa29.11■■■□□ 2.25
USF2-214ENST00000600898 UNC13AQ9UPW8 1703 aa28.98■■■□□ 2.23
USF2-214ENST00000600898 DNAJC5BQ9UF47 199 aa28.77■■■□□ 2.2
USF2-214ENST00000600898 BICRAQ9NZM4 1560 aa28.72■■■□□ 2.19
USF2-214ENST00000600898 PABPN1Q86U42 306 aaKnown RBP eCLIP28.66■■■□□ 2.18
USF2-214ENST00000600898 CECR2Q9BXF3 1484 aa28.17■■■□□ 2.1
USF2-214ENST00000600898 MROH2BQ7Z745 1585 aa27.92■■■□□ 2.06
USF2-214ENST00000600898 SMARCA4P51532 1647 aa27.85■■■□□ 2.05
USF2-214ENST00000600898 BAZ1AQ9NRL2 1556 aaPredicted RBP27.82■■■□□ 2.04
USF2-214ENST00000600898 RSF1Q96T23 1441 aaPredicted RBP27.81■■■□□ 2.04
USF2-214ENST00000600898 EIF4G1Q04637 1599 aaKnown RBP27.81■■■□□ 2.04
USF2-214ENST00000600898 SUPT5HO00267 1087 aaKnown RBP27.7■■■□□ 2.02
USF2-214ENST00000600898 WIZO95785 1651 aa27.66■■■□□ 2.02
USF2-214ENST00000600898 CC2D2AQ9P2K1 1620 aa27.56■■■□□ 2
USF2-214ENST00000600898 ATAD2BQ9ULI0 1458 aa27.52■■■□□ 2
USF2-214ENST00000600898 PEG3Q9GZU2 1588 aa27.5■■□□□ 1.99
USF2-214ENST00000600898 SMARCA2P51531 1590 aa27.4■■□□□ 1.98
USF2-214ENST00000600898 NCAPD3P42695 1498 aa27.34■■□□□ 1.97
USF2-214ENST00000600898 TOP2AP11388 1531 aaKnown RBP27.28■■□□□ 1.96
USF2-214ENST00000600898 BAZ1BQ9UIG0 1483 aaKnown RBP27.28■■□□□ 1.96
USF2-214ENST00000600898 HMGXB3Q12766 1538 aa27.24■■□□□ 1.95
USF2-214ENST00000600898 CCDC88BA6NC98 1476 aa27.05■■□□□ 1.92
USF2-214ENST00000600898 NESP48681 1621 aa26.65■■□□□ 1.86
USF2-214ENST00000600898 DNAJC5Q9H3Z4 198 aa26.6■■□□□ 1.85
USF2-214ENST00000600898 CADPSQ9ULU8 1353 aa26.59■■□□□ 1.85
USF2-214ENST00000600898 CFTRP13569 1480 aa26.59■■□□□ 1.85
USF2-214ENST00000600898 LAMC3Q9Y6N6 1575 aa26.46■■□□□ 1.83
USF2-214ENST00000600898 PRDM2Q13029 1718 aa26.42■■□□□ 1.82
USF2-214ENST00000600898 ABCC8Q09428 1581 aa26.34■■□□□ 1.81
USF2-214ENST00000600898 FANCD2Q9BXW9 1451 aa26.31■■□□□ 1.8
USF2-214ENST00000600898 CHIC1Q5VXU3 224 aa26.29■■□□□ 1.8
USF2-214ENST00000600898 KIF21AQ7Z4S6 1674 aa26.28■■□□□ 1.8
USF2-214ENST00000600898 ERCC6Q03468 1493 aa26.27■■□□□ 1.8
USF2-214ENST00000600898 CUX2O14529 1486 aa26.25■■□□□ 1.79
USF2-214ENST00000600898 PDS5BQ9NTI5 1447 aa26.22■■□□□ 1.79
USF2-214ENST00000600898 CEP164Q9UPV0 1460 aa26.16■■□□□ 1.78
USF2-214ENST00000600898 SYNJ1O43426 1573 aa26.14■■□□□ 1.78
USF2-214ENST00000600898 CUX1P39880 1505 aa26.13■■□□□ 1.77
USF2-214ENST00000600898 WRNQ14191 1432 aaPredicted RBP eCLIP26.13■■□□□ 1.77
USF2-214ENST00000600898 URB2Q14146 1524 aaKnown RBP26.09■■□□□ 1.77
USF2-214ENST00000600898 TRIM41Q8WV44 630 aa26.01■■□□□ 1.75
USF2-214ENST00000600898 TOP2BQ02880 1626 aa26■■□□□ 1.75
USF2-214ENST00000600898 BIVM-ERCC5R4GMW8 1640 aa26■■□□□ 1.75
USF2-214ENST00000600898 TOPBP1Q92547 1522 aa26■■□□□ 1.75
USF2-214ENST00000600898 MRC2Q9UBG0 1479 aa25.99■■□□□ 1.75
USF2-214ENST00000600898 THOC2Q8NI27 1593 aaKnown RBP25.99■■□□□ 1.75
USF2-214ENST00000600898 DNMBPQ6XZF7 1577 aa25.98■■□□□ 1.75
USF2-214ENST00000600898 WDR62O43379 1518 aa25.89■■□□□ 1.74
USF2-214ENST00000600898 FGD5Q6ZNL6 1462 aa25.88■■□□□ 1.73
USF2-214ENST00000600898 POLA1P09884 1462 aaPredicted RBP25.83■■□□□ 1.73
USF2-214ENST00000600898 RAD54L2Q9Y4B4 1467 aa25.79■■□□□ 1.72
USF2-214ENST00000600898 RUSC2Q8N2Y8 1516 aa25.73■■□□□ 1.71
USF2-214ENST00000600898 SOGA1O94964 1423 aa25.73■■□□□ 1.71
USF2-214ENST00000600898 TARBP1Q13395 1621 aaKnown RBP25.68■■□□□ 1.7
USF2-214ENST00000600898 WDR97A6NE52 1622 aa25.63■■□□□ 1.69
USF2-214ENST00000600898 FAM9AQ8IZU1 332 aaPredicted RBP25.62■■□□□ 1.69
USF2-214ENST00000600898 ABCA10Q8WWZ4 1543 aa25.61■■□□□ 1.69
USF2-214ENST00000600898 ZNF608Q9ULD9 1512 aaPredicted RBP25.57■■□□□ 1.68
USF2-214ENST00000600898 IFT140Q96RY7 1462 aa25.56■■□□□ 1.68
USF2-214ENST00000600898 TDRD9Q8NDG6 1382 aaKnown RBP25.56■■□□□ 1.68
USF2-214ENST00000600898 AQRO60306 1485 aaKnown RBP eCLIP25.49■■□□□ 1.672e-7■□□□□ 9.8
USF2-214ENST00000600898 ABCA5Q8WWZ7 1642 aa25.48■■□□□ 1.67
USF2-214ENST00000600898 KIF27Q86VH2 1401 aa25.46■■□□□ 1.67
USF2-214ENST00000600898 EIF4G3O43432 1585 aaKnown RBP25.41■■□□□ 1.66
USF2-214ENST00000600898 GAPVD1Q14C86 1478 aa25.4■■□□□ 1.66
USF2-214ENST00000600898 IGF1RP08069 1367 aa25.4■■□□□ 1.66
USF2-214ENST00000600898 CSRNP3Q8WYN3 585 aa25.39■■□□□ 1.66
USF2-214ENST00000600898 EEA1Q15075 1411 aa25.38■■□□□ 1.65
USF2-214ENST00000600898 PBRM1Q86U86 1689 aa25.34■■□□□ 1.65
USF2-214ENST00000600898 EHMT2Q96KQ7 1210 aa25.32■■□□□ 1.64
USF2-214ENST00000600898 LOC105371045A0A1W2PR82 267 aa25.31■■□□□ 1.64
USF2-214ENST00000600898 GRIN2BQ13224 1484 aa25.27■■□□□ 1.64
USF2-214ENST00000600898 ERICH3Q5RHP9 1530 aa25.27■■□□□ 1.64
USF2-214ENST00000600898 PRXQ9BXM0 1461 aa25.25■■□□□ 1.63
USF2-214ENST00000600898 SNAPC4Q5SXM2 1469 aa25.21■■□□□ 1.63
USF2-214ENST00000600898 CARMIL1Q5VZK9 1371 aa25.21■■□□□ 1.63
USF2-214ENST00000600898 RAPGEF2Q9Y4G8 1499 aa25.2■■□□□ 1.62
USF2-214ENST00000600898 KIF21BO75037 1637 aa25.19■■□□□ 1.62
USF2-214ENST00000600898 ADAMTS12P58397 1594 aa25.18■■□□□ 1.62
USF2-214ENST00000600898 CUL7Q14999 1698 aa25.16■■□□□ 1.62
USF2-214ENST00000600898 FHAD1B1AJZ9 1412 aa25.11■■□□□ 1.61
USF2-214ENST00000600898 MAGI1Q96QZ7 1491 aaPredicted RBP25.09■■□□□ 1.61
USF2-214ENST00000600898 GOLGA3Q08378 1498 aa25.08■■□□□ 1.6
USF2-214ENST00000600898 OSCARQ8IYS5 282 aa25.07■■□□□ 1.6
USF2-214ENST00000600898 SYNJ2O15056 1496 aa25.02■■□□□ 1.6
USF2-214ENST00000600898 CHD1O14646 1710 aa24.99■■□□□ 1.59
USF2-214ENST00000600898 GRIN2AQ12879 1464 aa24.98■■□□□ 1.59
USF2-214ENST00000600898 UBTFP17480 764 aaKnown RBP24.98■■□□□ 1.59
USF2-214ENST00000600898 FBLN2P98095 1184 aa24.98■■□□□ 1.59
USF2-214ENST00000600898 CHMP7Q8WUX9 453 aaPredicted RBP24.95■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 250.2 ms