RNA–Protein interactions for RNA: ENST00000600832.1

LINC00347-206, long intergenic non-protein coding RNA 347, humanhuman

TSL 5

Gene LINC00347, Length 807 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00347-206ENST00000600832 NISCHQ9Y2I1 1504 aa28.62■■■□□ 2.17
LINC00347-206ENST00000600832 CCDC180Q9P1Z9 1646 aa25.4■■□□□ 1.66
LINC00347-206ENST00000600832 ABCC9O60706 1549 aa24.39■■□□□ 1.49
LINC00347-206ENST00000600832 ZCCHC6Q5VYS8 1495 aaKnown RBP23.94■■□□□ 1.42
LINC00347-206ENST00000600832 DCAF1Q9Y4B6 1507 aa23.74■■□□□ 1.39
LINC00347-206ENST00000600832 NACADO15069 1562 aa23.74■■□□□ 1.39
LINC00347-206ENST00000600832 MYO15BQ96JP2 1530 aa23.73■■□□□ 1.39
LINC00347-206ENST00000600832 RB1CC1Q8TDY2 1594 aa23.68■■□□□ 1.38
LINC00347-206ENST00000600832 DCAF8L2P0C7V8 631 aa23.6■■□□□ 1.37
LINC00347-206ENST00000600832 UNC13AQ9UPW8 1703 aa23.22■■□□□ 1.31
LINC00347-206ENST00000600832 SCRIBQ14160 1630 aa23.12■■□□□ 1.29
LINC00347-206ENST00000600832 BICRAQ9NZM4 1560 aa22.95■■□□□ 1.26
LINC00347-206ENST00000600832 SHROOM4Q9ULL8 1493 aa22.79■■□□□ 1.24
LINC00347-206ENST00000600832 PABPN1Q86U42 306 aaKnown RBP eCLIP22.77■■□□□ 1.24
LINC00347-206ENST00000600832 EIF4G1Q04637 1599 aaKnown RBP22.32■■□□□ 1.16
LINC00347-206ENST00000600832 CECR2Q9BXF3 1484 aa22.22■■□□□ 1.15
LINC00347-206ENST00000600832 BAZ1AQ9NRL2 1556 aaPredicted RBP22.18■■□□□ 1.14
LINC00347-206ENST00000600832 SMARCA4P51532 1647 aa22.17■■□□□ 1.14
LINC00347-206ENST00000600832 CC2D2AQ9P2K1 1620 aa22.13■■□□□ 1.13
LINC00347-206ENST00000600832 MROH2BQ7Z745 1585 aa22.05■■□□□ 1.12
LINC00347-206ENST00000600832 DNAJC5BQ9UF47 199 aa22.01■■□□□ 1.11
LINC00347-206ENST00000600832 PEG3Q9GZU2 1588 aa21.97■■□□□ 1.11
LINC00347-206ENST00000600832 SMARCA2P51531 1590 aa21.95■■□□□ 1.1
LINC00347-206ENST00000600832 ATAD2BQ9ULI0 1458 aa21.91■■□□□ 1.1
LINC00347-206ENST00000600832 RSF1Q96T23 1441 aaPredicted RBP21.89■■□□□ 1.1
LINC00347-206ENST00000600832 NCAPD3P42695 1498 aa21.86■■□□□ 1.09
LINC00347-206ENST00000600832 HMGXB3Q12766 1538 aa21.85■■□□□ 1.09
LINC00347-206ENST00000600832 WIZO95785 1651 aa21.85■■□□□ 1.09
LINC00347-206ENST00000600832 BAZ1BQ9UIG0 1483 aaKnown RBP21.77■■□□□ 1.07
LINC00347-206ENST00000600832 TOP2AP11388 1531 aaKnown RBP21.65■■□□□ 1.06
LINC00347-206ENST00000600832 SUPT5HO00267 1087 aaKnown RBP21.48■■□□□ 1.03
LINC00347-206ENST00000600832 CCDC88BA6NC98 1476 aa21.34■■□□□ 1.01
LINC00347-206ENST00000600832 LAMC3Q9Y6N6 1575 aa21.27■■□□□ 1
LINC00347-206ENST00000600832 NESP48681 1621 aa21.21■□□□□ 0.99
LINC00347-206ENST00000600832 CADPSQ9ULU8 1353 aa21.21■□□□□ 0.99
LINC00347-206ENST00000600832 PRDM2Q13029 1718 aa21.19■□□□□ 0.98
LINC00347-206ENST00000600832 CFTRP13569 1480 aa21.19■□□□□ 0.98
LINC00347-206ENST00000600832 KIF21AQ7Z4S6 1674 aa21.06■□□□□ 0.96
LINC00347-206ENST00000600832 PDS5BQ9NTI5 1447 aa21.06■□□□□ 0.96
LINC00347-206ENST00000600832 ERCC6Q03468 1493 aa21.01■□□□□ 0.95
LINC00347-206ENST00000600832 FANCD2Q9BXW9 1451 aa20.99■□□□□ 0.95
LINC00347-206ENST00000600832 CEP164Q9UPV0 1460 aa20.95■□□□□ 0.94
LINC00347-206ENST00000600832 THOC2Q8NI27 1593 aaKnown RBP20.91■□□□□ 0.94
LINC00347-206ENST00000600832 MRC2Q9UBG0 1479 aa20.86■□□□□ 0.93
LINC00347-206ENST00000600832 WDR62O43379 1518 aa20.81■□□□□ 0.92
LINC00347-206ENST00000600832 URB2Q14146 1524 aaKnown RBP20.77■□□□□ 0.92
LINC00347-206ENST00000600832 DNMBPQ6XZF7 1577 aa20.74■□□□□ 0.91
LINC00347-206ENST00000600832 ABCC8Q09428 1581 aa20.73■□□□□ 0.91
LINC00347-206ENST00000600832 CUX2O14529 1486 aa20.71■□□□□ 0.91
LINC00347-206ENST00000600832 TOPBP1Q92547 1522 aa20.71■□□□□ 0.91
LINC00347-206ENST00000600832 CUX1P39880 1505 aa20.68■□□□□ 0.9
LINC00347-206ENST00000600832 BIVM-ERCC5R4GMW8 1640 aa20.64■□□□□ 0.9
LINC00347-206ENST00000600832 WRNQ14191 1432 aaPredicted RBP eCLIP20.64■□□□□ 0.89
LINC00347-206ENST00000600832 TOP2BQ02880 1626 aa20.62■□□□□ 0.89
LINC00347-206ENST00000600832 SYNJ1O43426 1573 aa20.62■□□□□ 0.89
LINC00347-206ENST00000600832 POLA1P09884 1462 aaPredicted RBP20.56■□□□□ 0.88
LINC00347-206ENST00000600832 FGD5Q6ZNL6 1462 aa20.55■□□□□ 0.88
LINC00347-206ENST00000600832 IFT140Q96RY7 1462 aa20.5■□□□□ 0.87
LINC00347-206ENST00000600832 TARBP1Q13395 1621 aaKnown RBP20.49■□□□□ 0.87
LINC00347-206ENST00000600832 WDR97A6NE52 1622 aa20.45■□□□□ 0.87
LINC00347-206ENST00000600832 SOGA1O94964 1423 aa20.42■□□□□ 0.86
LINC00347-206ENST00000600832 RAD54L2Q9Y4B4 1467 aa20.42■□□□□ 0.86
LINC00347-206ENST00000600832 ABCA10Q8WWZ4 1543 aa20.37■□□□□ 0.85
LINC00347-206ENST00000600832 EIF4G3O43432 1585 aaKnown RBP20.36■□□□□ 0.85
LINC00347-206ENST00000600832 ZNF608Q9ULD9 1512 aaPredicted RBP20.35■□□□□ 0.85
LINC00347-206ENST00000600832 ABCA5Q8WWZ7 1642 aa20.31■□□□□ 0.84
LINC00347-206ENST00000600832 TRIM41Q8WV44 630 aa20.3■□□□□ 0.84
LINC00347-206ENST00000600832 CHIC1Q5VXU3 224 aa20.27■□□□□ 0.84
LINC00347-206ENST00000600832 PBRM1Q86U86 1689 aa20.26■□□□□ 0.83
LINC00347-206ENST00000600832 TDRD9Q8NDG6 1382 aaKnown RBP20.25■□□□□ 0.83
LINC00347-206ENST00000600832 AQRO60306 1485 aaKnown RBP eCLIP20.24■□□□□ 0.83
LINC00347-206ENST00000600832 GAPVD1Q14C86 1478 aa20.23■□□□□ 0.83
LINC00347-206ENST00000600832 KIF27Q86VH2 1401 aa20.19■□□□□ 0.82
LINC00347-206ENST00000600832 GRIN2BQ13224 1484 aa20.18■□□□□ 0.82
LINC00347-206ENST00000600832 ERICH3Q5RHP9 1530 aa20.16■□□□□ 0.82
LINC00347-206ENST00000600832 MAGI1Q96QZ7 1491 aaPredicted RBP20.12■□□□□ 0.81
LINC00347-206ENST00000600832 SNAPC4Q5SXM2 1469 aa20.11■□□□□ 0.81
LINC00347-206ENST00000600832 ADAMTS12P58397 1594 aa20.08■□□□□ 0.81
LINC00347-206ENST00000600832 CUL7Q14999 1698 aa20.07■□□□□ 0.8
LINC00347-206ENST00000600832 RUSC2Q8N2Y8 1516 aa20.07■□□□□ 0.8
LINC00347-206ENST00000600832 CHD1O14646 1710 aa20.05■□□□□ 0.8
LINC00347-206ENST00000600832 EEA1Q15075 1411 aa20.04■□□□□ 0.8
LINC00347-206ENST00000600832 SYNJ2O15056 1496 aa20.03■□□□□ 0.8
LINC00347-206ENST00000600832 IGF1RP08069 1367 aa20.02■□□□□ 0.8
LINC00347-206ENST00000600832 FHAD1B1AJZ9 1412 aa20.01■□□□□ 0.79
LINC00347-206ENST00000600832 GRIN2AQ12879 1464 aa19.94■□□□□ 0.78
LINC00347-206ENST00000600832 CARMIL1Q5VZK9 1371 aa19.92■□□□□ 0.78
LINC00347-206ENST00000600832 CHMP7Q8WUX9 453 aaPredicted RBP19.9■□□□□ 0.78
LINC00347-206ENST00000600832 PRXQ9BXM0 1461 aa19.9■□□□□ 0.78
LINC00347-206ENST00000600832 FBLN2P98095 1184 aa19.88■□□□□ 0.77
LINC00347-206ENST00000600832 RAPGEF2Q9Y4G8 1499 aa19.87■□□□□ 0.77
LINC00347-206ENST00000600832 CSRNP3Q8WYN3 585 aa19.87■□□□□ 0.77
LINC00347-206ENST00000600832 KIF21BO75037 1637 aa19.85■□□□□ 0.77
LINC00347-206ENST00000600832 NUP160Q12769 1436 aa19.85■□□□□ 0.77
LINC00347-206ENST00000600832 CEP170Q5SW79 1584 aa19.84■□□□□ 0.77
LINC00347-206ENST00000600832 FAM9AQ8IZU1 332 aaPredicted RBP19.83■□□□□ 0.77
LINC00347-206ENST00000600832 CLASP1Q7Z460 1538 aa19.81■□□□□ 0.76
LINC00347-206ENST00000600832 OSCARQ8IYS5 282 aa19.81■□□□□ 0.76
LINC00347-206ENST00000600832 CTTNBP2Q8WZ74 1663 aa19.77■□□□□ 0.76
LINC00347-206ENST00000600832 KIAA0586Q9BVV6 1533 aa19.71■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms