RNA–Protein interactions for RNA: ENST00000600610.5

GTPBP3-221, Transcript of GTP binding protein 3, mitochondrial, humanhuman

TSL 1 (best)

Gene GTPBP3, Length 1,105 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTPBP3-221ENST00000600610 NISCHQ9Y2I1 1504 aa49.5■■■■■ 5.52
GTPBP3-221ENST00000600610 CCDC180Q9P1Z9 1646 aa43.98■■■■■ 4.63
GTPBP3-221ENST00000600610 ABCC9O60706 1549 aa42.97■■■■■ 4.47
GTPBP3-221ENST00000600610 RB1CC1Q8TDY2 1594 aa41.41■■■■■ 4.22
GTPBP3-221ENST00000600610 NACADO15069 1562 aa41.37■■■■■ 4.21
GTPBP3-221ENST00000600610 ZCCHC6Q5VYS8 1495 aaKnown RBP41.31■■■■■ 4.2
GTPBP3-221ENST00000600610 DCAF8L2P0C7V8 631 aa41.23■■■■■ 4.19
GTPBP3-221ENST00000600610 MYO15BQ96JP2 1530 aa41.18■■■■■ 4.18
GTPBP3-221ENST00000600610 DCAF1Q9Y4B6 1507 aa41.13■■■■■ 4.17
GTPBP3-221ENST00000600610 UNC13AQ9UPW8 1703 aa40.45■■■■■ 4.07
GTPBP3-221ENST00000600610 PABPN1Q86U42 306 aaKnown RBP eCLIP40.13■■■■■ 4.01
GTPBP3-221ENST00000600610 BICRAQ9NZM4 1560 aa40.1■■■■■ 4.01
GTPBP3-221ENST00000600610 SCRIBQ14160 1630 aa40.01■■■■■ 4
GTPBP3-221ENST00000600610 SHROOM4Q9ULL8 1493 aa39.78■■■■□ 3.96
GTPBP3-221ENST00000600610 DNAJC5BQ9UF47 199 aa39.49■■■■□ 3.91
GTPBP3-221ENST00000600610 EIF4G1Q04637 1599 aaKnown RBP39.06■■■■□ 3.84
GTPBP3-221ENST00000600610 CC2D2AQ9P2K1 1620 aa38.92■■■■□ 3.82
GTPBP3-221ENST00000600610 CECR2Q9BXF3 1484 aa38.66■■■■□ 3.78
GTPBP3-221ENST00000600610 BAZ1AQ9NRL2 1556 aaPredicted RBP38.39■■■■□ 3.74
GTPBP3-221ENST00000600610 SMARCA4P51532 1647 aa38.32■■■■□ 3.73
GTPBP3-221ENST00000600610 NCAPD3P42695 1498 aa38.16■■■■□ 3.7
GTPBP3-221ENST00000600610 ATAD2BQ9ULI0 1458 aa38.13■■■■□ 3.69
GTPBP3-221ENST00000600610 SMARCA2P51531 1590 aa38.12■■■■□ 3.69
GTPBP3-221ENST00000600610 MROH2BQ7Z745 1585 aa38.06■■■■□ 3.68
GTPBP3-221ENST00000600610 PEG3Q9GZU2 1588 aa38.04■■■■□ 3.68
GTPBP3-221ENST00000600610 HMGXB3Q12766 1538 aa37.95■■■■□ 3.67
GTPBP3-221ENST00000600610 RSF1Q96T23 1441 aaPredicted RBP37.82■■■■□ 3.64
GTPBP3-221ENST00000600610 BAZ1BQ9UIG0 1483 aaKnown RBP37.81■■■■□ 3.64
GTPBP3-221ENST00000600610 WIZO95785 1651 aa37.7■■■■□ 3.63
GTPBP3-221ENST00000600610 TOP2AP11388 1531 aaKnown RBP37.39■■■■□ 3.58
GTPBP3-221ENST00000600610 LAMC3Q9Y6N6 1575 aa37.17■■■■□ 3.54
GTPBP3-221ENST00000600610 NESP48681 1621 aa37.16■■■■□ 3.54
GTPBP3-221ENST00000600610 ERCC6Q03468 1493 aa37.07■■■■□ 3.53
GTPBP3-221ENST00000600610 SUPT5HO00267 1087 aaKnown RBP37.04■■■■□ 3.52
GTPBP3-221ENST00000600610 CADPSQ9ULU8 1353 aa37.03■■■■□ 3.52
GTPBP3-221ENST00000600610 PDS5BQ9NTI5 1447 aa36.92■■■■□ 3.5
GTPBP3-221ENST00000600610 CCDC88BA6NC98 1476 aa36.89■■■■□ 3.5
GTPBP3-221ENST00000600610 CFTRP13569 1480 aa36.79■■■■□ 3.48
GTPBP3-221ENST00000600610 KIF21AQ7Z4S6 1674 aa36.77■■■■□ 3.48
GTPBP3-221ENST00000600610 CUX2O14529 1486 aa36.76■■■■□ 3.48
GTPBP3-221ENST00000600610 THOC2Q8NI27 1593 aaKnown RBP36.65■■■■□ 3.46
GTPBP3-221ENST00000600610 PRDM2Q13029 1718 aa36.62■■■■□ 3.45
GTPBP3-221ENST00000600610 FANCD2Q9BXW9 1451 aa36.56■■■■□ 3.44
GTPBP3-221ENST00000600610 CEP164Q9UPV0 1460 aa36.53■■■■□ 3.44
GTPBP3-221ENST00000600610 MRC2Q9UBG0 1479 aa36.5■■■■□ 3.43
GTPBP3-221ENST00000600610 WDR62O43379 1518 aa36.39■■■■□ 3.42
GTPBP3-221ENST00000600610 URB2Q14146 1524 aaKnown RBP36.18■■■■□ 3.38
GTPBP3-221ENST00000600610 ABCC8Q09428 1581 aa36.07■■■■□ 3.37
GTPBP3-221ENST00000600610 TOPBP1Q92547 1522 aa35.98■■■■□ 3.35
GTPBP3-221ENST00000600610 DNMBPQ6XZF7 1577 aa35.95■■■■□ 3.35
GTPBP3-221ENST00000600610 IFT140Q96RY7 1462 aa35.8■■■■□ 3.32
GTPBP3-221ENST00000600610 DNAJC5Q9H3Z4 198 aa35.7■■■■□ 3.31
GTPBP3-221ENST00000600610 CUX1P39880 1505 aa35.69■■■■□ 3.3
GTPBP3-221ENST00000600610 WRNQ14191 1432 aaPredicted RBP eCLIP35.67■■■■□ 3.3
GTPBP3-221ENST00000600610 POLA1P09884 1462 aaPredicted RBP35.66■■■■□ 3.3
GTPBP3-221ENST00000600610 BIVM-ERCC5R4GMW8 1640 aa35.62■■■■□ 3.29
GTPBP3-221ENST00000600610 TOP2BQ02880 1626 aa35.61■■■■□ 3.29
GTPBP3-221ENST00000600610 TARBP1Q13395 1621 aaKnown RBP35.61■■■■□ 3.29
GTPBP3-221ENST00000600610 ZNF608Q9ULD9 1512 aaPredicted RBP35.57■■■■□ 3.28
GTPBP3-221ENST00000600610 FGD5Q6ZNL6 1462 aa35.56■■■■□ 3.28
GTPBP3-221ENST00000600610 SOGA1O94964 1423 aa35.54■■■■□ 3.28
GTPBP3-221ENST00000600610 SYNJ1O43426 1573 aa35.51■■■■□ 3.27
GTPBP3-221ENST00000600610 RAD54L2Q9Y4B4 1467 aa35.48■■■■□ 3.27
GTPBP3-221ENST00000600610 EIF4G3O43432 1585 aaKnown RBP35.45■■■■□ 3.27
GTPBP3-221ENST00000600610 WDR97A6NE52 1622 aa35.4■■■■□ 3.26
GTPBP3-221ENST00000600610 AQRO60306 1485 aaKnown RBP eCLIP35.38■■■■□ 3.259e-8■■■■■ 31.6
GTPBP3-221ENST00000600610 TDRD9Q8NDG6 1382 aaKnown RBP35.3■■■■□ 3.24
GTPBP3-221ENST00000600610 ABCA10Q8WWZ4 1543 aa35.27■■■■□ 3.24
GTPBP3-221ENST00000600610 OSCARQ8IYS5 282 aa35.24■■■■□ 3.23
GTPBP3-221ENST00000600610 GRIN2BQ13224 1484 aa35.14■■■■□ 3.22
GTPBP3-221ENST00000600610 GAPVD1Q14C86 1478 aa35.13■■■■□ 3.21
GTPBP3-221ENST00000600610 TRIM41Q8WV44 630 aa35.1■■■■□ 3.21
GTPBP3-221ENST00000600610 ABCA5Q8WWZ7 1642 aa35.1■■■■□ 3.21
GTPBP3-221ENST00000600610 MAGI1Q96QZ7 1491 aaPredicted RBP35.07■■■■□ 3.2
GTPBP3-221ENST00000600610 PBRM1Q86U86 1689 aa35.05■■■■□ 3.2
GTPBP3-221ENST00000600610 SNAPC4Q5SXM2 1469 aa35.04■■■■□ 3.2
GTPBP3-221ENST00000600610 CHD1O14646 1710 aa35.03■■■■□ 3.2
GTPBP3-221ENST00000600610 FBLN2P98095 1184 aa34.96■■■■□ 3.19
GTPBP3-221ENST00000600610 KIF27Q86VH2 1401 aa34.94■■■■□ 3.18
GTPBP3-221ENST00000600610 SYNJ2O15056 1496 aa34.91■■■■□ 3.18
GTPBP3-221ENST00000600610 CHIC1Q5VXU3 224 aa34.91■■■■□ 3.18
GTPBP3-221ENST00000600610 CHMP7Q8WUX9 453 aaPredicted RBP34.91■■■■□ 3.18
GTPBP3-221ENST00000600610 ERICH3Q5RHP9 1530 aa34.91■■■■□ 3.18
GTPBP3-221ENST00000600610 ADAMTS12P58397 1594 aa34.74■■■■□ 3.15
GTPBP3-221ENST00000600610 FHAD1B1AJZ9 1412 aa34.73■■■■□ 3.15
GTPBP3-221ENST00000600610 CUL7Q14999 1698 aa34.7■■■■□ 3.14
GTPBP3-221ENST00000600610 IGF1RP08069 1367 aa34.69■■■■□ 3.14
GTPBP3-221ENST00000600610 GRIN2AQ12879 1464 aa34.67■■■■□ 3.14
GTPBP3-221ENST00000600610 CLASP1Q7Z460 1538 aa34.65■■■■□ 3.14
GTPBP3-221ENST00000600610 EEA1Q15075 1411 aa34.65■■■■□ 3.14
GTPBP3-221ENST00000600610 RIMBP3CA6NJZ7 1639 aa34.62■■■■□ 3.13
GTPBP3-221ENST00000600610 RIMBP3BA6NNM3 1639 aa34.62■■■■□ 3.13
GTPBP3-221ENST00000600610 RIMBP3Q9UFD9 1639 aa34.62■■■■□ 3.13
GTPBP3-221ENST00000600610 ARHGEF11O15085 1522 aa34.6■■■■□ 3.13
GTPBP3-221ENST00000600610 RUSC2Q8N2Y8 1516 aa34.57■■■■□ 3.12
GTPBP3-221ENST00000600610 NUP160Q12769 1436 aa34.53■■■■□ 3.12
GTPBP3-221ENST00000600610 CARMIL1Q5VZK9 1371 aa34.5■■■■□ 3.11
GTPBP3-221ENST00000600610 CEP170Q5SW79 1584 aa34.47■■■■□ 3.11
GTPBP3-221ENST00000600610 CSRNP3Q8WYN3 585 aa34.42■■■■□ 3.1
GTPBP3-221ENST00000600610 RAPGEF2Q9Y4G8 1499 aa34.38■■■■□ 3.09
Retrieved 100 of 20,778 RNA–protein pairs in 79.8 ms