RNA–Protein interactions for RNA: ENST00000599698.5

PRAM1-203, Transcript of PML-RARA regulated adaptor molecule 1, humanhuman

TSL 3

Gene PRAM1, Length 633 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAM1-203ENST00000599698 NISCHQ9Y2I1 1504 aa43.51■■■■■ 4.56
PRAM1-203ENST00000599698 CCDC180Q9P1Z9 1646 aa38.63■■■■□ 3.78
PRAM1-203ENST00000599698 ABCC9O60706 1549 aa37.73■■■■□ 3.63
PRAM1-203ENST00000599698 NACADO15069 1562 aa36.37■■■■□ 3.41
PRAM1-203ENST00000599698 RB1CC1Q8TDY2 1594 aa36.37■■■■□ 3.41
PRAM1-203ENST00000599698 DCAF8L2P0C7V8 631 aa36.32■■■■□ 3.4
PRAM1-203ENST00000599698 ZCCHC6Q5VYS8 1495 aaKnown RBP36.24■■■■□ 3.39
PRAM1-203ENST00000599698 MYO15BQ96JP2 1530 aa36.24■■■■□ 3.39
PRAM1-203ENST00000599698 DCAF1Q9Y4B6 1507 aa36.07■■■■□ 3.36
PRAM1-203ENST00000599698 UNC13AQ9UPW8 1703 aa35.41■■■■□ 3.26
PRAM1-203ENST00000599698 PABPN1Q86U42 306 aaKnown RBP eCLIP35.3■■■■□ 3.24
PRAM1-203ENST00000599698 BICRAQ9NZM4 1560 aa35.22■■■■□ 3.23
PRAM1-203ENST00000599698 SCRIBQ14160 1630 aa35.18■■■■□ 3.22
PRAM1-203ENST00000599698 SHROOM4Q9ULL8 1493 aa34.99■■■■□ 3.19
PRAM1-203ENST00000599698 DNAJC5BQ9UF47 199 aa34.63■■■■□ 3.13
PRAM1-203ENST00000599698 EIF4G1Q04637 1599 aaKnown RBP34.31■■■■□ 3.08
PRAM1-203ENST00000599698 CC2D2AQ9P2K1 1620 aa34.14■■■■□ 3.06
PRAM1-203ENST00000599698 CECR2Q9BXF3 1484 aa33.95■■■■□ 3.02
PRAM1-203ENST00000599698 BAZ1AQ9NRL2 1556 aaPredicted RBP33.72■■■□□ 2.99
PRAM1-203ENST00000599698 SMARCA4P51532 1647 aa33.71■■■□□ 2.99
PRAM1-203ENST00000599698 NCAPD3P42695 1498 aa33.59■■■□□ 2.97
PRAM1-203ENST00000599698 ATAD2BQ9ULI0 1458 aa33.56■■■□□ 2.96
PRAM1-203ENST00000599698 SMARCA2P51531 1590 aa33.54■■■□□ 2.96
PRAM1-203ENST00000599698 MROH2BQ7Z745 1585 aa33.49■■■□□ 2.95
PRAM1-203ENST00000599698 PEG3Q9GZU2 1588 aa33.44■■■□□ 2.94
PRAM1-203ENST00000599698 HMGXB3Q12766 1538 aa33.38■■■□□ 2.93
PRAM1-203ENST00000599698 BAZ1BQ9UIG0 1483 aaKnown RBP33.28■■■□□ 2.92
PRAM1-203ENST00000599698 RSF1Q96T23 1441 aaPredicted RBP33.18■■■□□ 2.9
PRAM1-203ENST00000599698 WIZO95785 1651 aa33.09■■■□□ 2.89
PRAM1-203ENST00000599698 TOP2AP11388 1531 aaKnown RBP32.8■■■□□ 2.84
PRAM1-203ENST00000599698 LAMC3Q9Y6N6 1575 aa32.65■■■□□ 2.82
PRAM1-203ENST00000599698 NESP48681 1621 aa32.65■■■□□ 2.82
PRAM1-203ENST00000599698 CADPSQ9ULU8 1353 aa32.61■■■□□ 2.81
PRAM1-203ENST00000599698 ERCC6Q03468 1493 aa32.55■■■□□ 2.8
PRAM1-203ENST00000599698 PDS5BQ9NTI5 1447 aa32.48■■■□□ 2.79
PRAM1-203ENST00000599698 CCDC88BA6NC98 1476 aa32.43■■■□□ 2.78
PRAM1-203ENST00000599698 CFTRP13569 1480 aa32.41■■■□□ 2.78
PRAM1-203ENST00000599698 SUPT5HO00267 1087 aaKnown RBP32.33■■■□□ 2.77
PRAM1-203ENST00000599698 CUX2O14529 1486 aa32.24■■■□□ 2.75
PRAM1-203ENST00000599698 KIF21AQ7Z4S6 1674 aa32.22■■■□□ 2.75
PRAM1-203ENST00000599698 FANCD2Q9BXW9 1451 aa32.18■■■□□ 2.74
PRAM1-203ENST00000599698 THOC2Q8NI27 1593 aaKnown RBP32.15■■■□□ 2.74
PRAM1-203ENST00000599698 CEP164Q9UPV0 1460 aa32.13■■■□□ 2.73
PRAM1-203ENST00000599698 MRC2Q9UBG0 1479 aa32.09■■■□□ 2.73
PRAM1-203ENST00000599698 PRDM2Q13029 1718 aa32.03■■■□□ 2.72
PRAM1-203ENST00000599698 WDR62O43379 1518 aa31.96■■■□□ 2.71
PRAM1-203ENST00000599698 URB2Q14146 1524 aaKnown RBP31.84■■■□□ 2.69
PRAM1-203ENST00000599698 ABCC8Q09428 1581 aa31.75■■■□□ 2.67
PRAM1-203ENST00000599698 TOPBP1Q92547 1522 aa31.66■■■□□ 2.66
PRAM1-203ENST00000599698 DNMBPQ6XZF7 1577 aa31.63■■■□□ 2.65
PRAM1-203ENST00000599698 IFT140Q96RY7 1462 aa31.5■■■□□ 2.63
PRAM1-203ENST00000599698 CUX1P39880 1505 aa31.42■■■□□ 2.62
PRAM1-203ENST00000599698 POLA1P09884 1462 aaPredicted RBP31.4■■■□□ 2.62
PRAM1-203ENST00000599698 FGD5Q6ZNL6 1462 aa31.32■■■□□ 2.6
PRAM1-203ENST00000599698 SOGA1O94964 1423 aa31.31■■■□□ 2.6
PRAM1-203ENST00000599698 TARBP1Q13395 1621 aaKnown RBP31.29■■■□□ 2.6
PRAM1-203ENST00000599698 WRNQ14191 1432 aaPredicted RBP eCLIP31.28■■■□□ 2.6
PRAM1-203ENST00000599698 ZNF608Q9ULD9 1512 aaPredicted RBP31.28■■■□□ 2.6
PRAM1-203ENST00000599698 DNAJC5Q9H3Z4 198 aa31.24■■■□□ 2.59
PRAM1-203ENST00000599698 RAD54L2Q9Y4B4 1467 aa31.24■■■□□ 2.59
PRAM1-203ENST00000599698 TOP2BQ02880 1626 aa31.18■■■□□ 2.58
PRAM1-203ENST00000599698 BIVM-ERCC5R4GMW8 1640 aa31.15■■■□□ 2.58
PRAM1-203ENST00000599698 AQRO60306 1485 aaKnown RBP eCLIP31.14■■■□□ 2.57
PRAM1-203ENST00000599698 EIF4G3O43432 1585 aaKnown RBP31.13■■■□□ 2.57
PRAM1-203ENST00000599698 SYNJ1O43426 1573 aa31.12■■■□□ 2.57
PRAM1-203ENST00000599698 WDR97A6NE52 1622 aa31.12■■■□□ 2.57
PRAM1-203ENST00000599698 TDRD9Q8NDG6 1382 aaKnown RBP31.1■■■□□ 2.57
PRAM1-203ENST00000599698 ABCA10Q8WWZ4 1543 aa31.06■■■□□ 2.56
PRAM1-203ENST00000599698 OSCARQ8IYS5 282 aa30.96■■■□□ 2.55
PRAM1-203ENST00000599698 GRIN2BQ13224 1484 aa30.94■■■□□ 2.54
PRAM1-203ENST00000599698 GAPVD1Q14C86 1478 aa30.93■■■□□ 2.54
PRAM1-203ENST00000599698 ABCA5Q8WWZ7 1642 aa30.87■■■□□ 2.53
PRAM1-203ENST00000599698 MAGI1Q96QZ7 1491 aaPredicted RBP30.85■■■□□ 2.53
PRAM1-203ENST00000599698 SNAPC4Q5SXM2 1469 aa30.83■■■□□ 2.53
PRAM1-203ENST00000599698 FBLN2P98095 1184 aa30.76■■■□□ 2.51
PRAM1-203ENST00000599698 PBRM1Q86U86 1689 aa30.75■■■□□ 2.51
PRAM1-203ENST00000599698 CHMP7Q8WUX9 453 aaPredicted RBP30.74■■■□□ 2.51
PRAM1-203ENST00000599698 SYNJ2O15056 1496 aa30.73■■■□□ 2.51
PRAM1-203ENST00000599698 ERICH3Q5RHP9 1530 aa30.69■■■□□ 2.5
PRAM1-203ENST00000599698 CHD1O14646 1710 aa30.69■■■□□ 2.5
PRAM1-203ENST00000599698 KIF27Q86VH2 1401 aa30.64■■■□□ 2.5
PRAM1-203ENST00000599698 FHAD1B1AJZ9 1412 aa30.6■■■□□ 2.49
PRAM1-203ENST00000599698 TRIM41Q8WV44 630 aa30.59■■■□□ 2.49
PRAM1-203ENST00000599698 ADAMTS12P58397 1594 aa30.56■■■□□ 2.48
PRAM1-203ENST00000599698 IGF1RP08069 1367 aa30.53■■■□□ 2.48
PRAM1-203ENST00000599698 GRIN2AQ12879 1464 aa30.5■■■□□ 2.47
PRAM1-203ENST00000599698 CLASP1Q7Z460 1538 aa30.44■■■□□ 2.46
PRAM1-203ENST00000599698 NUP160Q12769 1436 aa30.4■■■□□ 2.46
PRAM1-203ENST00000599698 CUL7Q14999 1698 aa30.38■■■□□ 2.45
PRAM1-203ENST00000599698 ARHGEF11O15085 1522 aa30.36■■■□□ 2.45
PRAM1-203ENST00000599698 CARMIL1Q5VZK9 1371 aa30.34■■■□□ 2.45
PRAM1-203ENST00000599698 RIMBP3CA6NJZ7 1639 aa30.33■■■□□ 2.45
PRAM1-203ENST00000599698 RIMBP3BA6NNM3 1639 aa30.33■■■□□ 2.45
PRAM1-203ENST00000599698 RIMBP3Q9UFD9 1639 aa30.33■■■□□ 2.45
PRAM1-203ENST00000599698 CEP170Q5SW79 1584 aa30.31■■■□□ 2.44
PRAM1-203ENST00000599698 RUSC2Q8N2Y8 1516 aa30.29■■■□□ 2.44
PRAM1-203ENST00000599698 CHIC1Q5VXU3 224 aa30.24■■■□□ 2.43
PRAM1-203ENST00000599698 RAPGEF2Q9Y4G8 1499 aa30.15■■■□□ 2.42
PRAM1-203ENST00000599698 KIAA0586Q9BVV6 1533 aa30.14■■■□□ 2.42
PRAM1-203ENST00000599698 JPH4Q96JJ6 628 aa30.13■■■□□ 2.41
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms