RNA–Protein interactions for RNA: ENST00000599471.5

USF2-211, Transcript of upstream transcription factor 2, c-fos interacting, humanhuman

TSL 3

Gene USF2, Length 1,173 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF2-211ENST00000599471 NISCHQ9Y2I1 1504 aa42.1■■■■■ 4.33
USF2-211ENST00000599471 CCDC180Q9P1Z9 1646 aa37.32■■■■□ 3.57
USF2-211ENST00000599471 ABCC9O60706 1549 aa36.42■■■■□ 3.42
USF2-211ENST00000599471 DCAF8L2P0C7V8 631 aa35.33■■■■□ 3.25
USF2-211ENST00000599471 ZCCHC6Q5VYS8 1495 aaKnown RBP35.11■■■■□ 3.21
USF2-211ENST00000599471 RB1CC1Q8TDY2 1594 aa35.04■■■■□ 3.2
USF2-211ENST00000599471 NACADO15069 1562 aa35.01■■■■□ 3.2
USF2-211ENST00000599471 MYO15BQ96JP2 1530 aa34.76■■■■□ 3.15
USF2-211ENST00000599471 DCAF1Q9Y4B6 1507 aa34.74■■■■□ 3.15
USF2-211ENST00000599471 UNC13AQ9UPW8 1703 aa34.33■■■■□ 3.09
USF2-211ENST00000599471 SCRIBQ14160 1630 aa34.23■■■■□ 3.07
USF2-211ENST00000599471 PABPN1Q86U42 306 aaKnown RBP eCLIP34.09■■■■□ 3.058e-7■□□□□ 11.1
USF2-211ENST00000599471 BICRAQ9NZM4 1560 aa33.94■■■■□ 3.02
USF2-211ENST00000599471 SHROOM4Q9ULL8 1493 aa33.64■■■□□ 2.98
USF2-211ENST00000599471 DNAJC5BQ9UF47 199 aa33.12■■■□□ 2.89
USF2-211ENST00000599471 EIF4G1Q04637 1599 aaKnown RBP33.06■■■□□ 2.88
USF2-211ENST00000599471 CC2D2AQ9P2K1 1620 aa32.9■■■□□ 2.86
USF2-211ENST00000599471 CECR2Q9BXF3 1484 aa32.83■■■□□ 2.85
USF2-211ENST00000599471 SMARCA4P51532 1647 aa32.66■■■□□ 2.82
USF2-211ENST00000599471 BAZ1AQ9NRL2 1556 aaPredicted RBP32.63■■■□□ 2.81
USF2-211ENST00000599471 MROH2BQ7Z745 1585 aa32.5■■■□□ 2.79
USF2-211ENST00000599471 ATAD2BQ9ULI0 1458 aa32.38■■■□□ 2.77
USF2-211ENST00000599471 SMARCA2P51531 1590 aa32.36■■■□□ 2.77
USF2-211ENST00000599471 NCAPD3P42695 1498 aa32.26■■■□□ 2.75
USF2-211ENST00000599471 WIZO95785 1651 aa32.22■■■□□ 2.75
USF2-211ENST00000599471 PEG3Q9GZU2 1588 aa32.22■■■□□ 2.75
USF2-211ENST00000599471 BAZ1BQ9UIG0 1483 aaKnown RBP32.19■■■□□ 2.74
USF2-211ENST00000599471 RSF1Q96T23 1441 aaPredicted RBP32.18■■■□□ 2.74
USF2-211ENST00000599471 HMGXB3Q12766 1538 aa32.16■■■□□ 2.74
USF2-211ENST00000599471 TOP2AP11388 1531 aaKnown RBP31.82■■■□□ 2.68
USF2-211ENST00000599471 SUPT5HO00267 1087 aaKnown RBP31.76■■■□□ 2.67
USF2-211ENST00000599471 NESP48681 1621 aa31.57■■■□□ 2.64
USF2-211ENST00000599471 CCDC88BA6NC98 1476 aa31.46■■■□□ 2.63
USF2-211ENST00000599471 LAMC3Q9Y6N6 1575 aa31.43■■■□□ 2.62
USF2-211ENST00000599471 CADPSQ9ULU8 1353 aa31.39■■■□□ 2.62
USF2-211ENST00000599471 ERCC6Q03468 1493 aa31.39■■■□□ 2.62
USF2-211ENST00000599471 KIF21AQ7Z4S6 1674 aa31.23■■■□□ 2.59
USF2-211ENST00000599471 CFTRP13569 1480 aa31.23■■■□□ 2.59
USF2-211ENST00000599471 PDS5BQ9NTI5 1447 aa31.23■■■□□ 2.59
USF2-211ENST00000599471 PRDM2Q13029 1718 aa31.12■■■□□ 2.57
USF2-211ENST00000599471 FANCD2Q9BXW9 1451 aa31.08■■■□□ 2.57
USF2-211ENST00000599471 CEP164Q9UPV0 1460 aa31.03■■■□□ 2.56
USF2-211ENST00000599471 THOC2Q8NI27 1593 aaKnown RBP30.98■■■□□ 2.55
USF2-211ENST00000599471 MRC2Q9UBG0 1479 aa30.92■■■□□ 2.54
USF2-211ENST00000599471 CUX2O14529 1486 aa30.82■■■□□ 2.53
USF2-211ENST00000599471 WDR62O43379 1518 aa30.77■■■□□ 2.52
USF2-211ENST00000599471 URB2Q14146 1524 aaKnown RBP30.75■■■□□ 2.51
USF2-211ENST00000599471 TOPBP1Q92547 1522 aa30.61■■■□□ 2.49
USF2-211ENST00000599471 DNMBPQ6XZF7 1577 aa30.59■■■□□ 2.49
USF2-211ENST00000599471 ABCC8Q09428 1581 aa30.56■■■□□ 2.48
USF2-211ENST00000599471 CUX1P39880 1505 aa30.48■■■□□ 2.47
USF2-211ENST00000599471 WRNQ14191 1432 aaPredicted RBP eCLIP30.38■■■□□ 2.45
USF2-211ENST00000599471 POLA1P09884 1462 aaPredicted RBP30.36■■■□□ 2.45
USF2-211ENST00000599471 FGD5Q6ZNL6 1462 aa30.36■■■□□ 2.45
USF2-211ENST00000599471 IFT140Q96RY7 1462 aa30.33■■■□□ 2.45
USF2-211ENST00000599471 SYNJ1O43426 1573 aa30.32■■■□□ 2.44
USF2-211ENST00000599471 RAD54L2Q9Y4B4 1467 aa30.28■■■□□ 2.44
USF2-211ENST00000599471 TOP2BQ02880 1626 aa30.26■■■□□ 2.44
USF2-211ENST00000599471 BIVM-ERCC5R4GMW8 1640 aa30.26■■■□□ 2.44
USF2-211ENST00000599471 SOGA1O94964 1423 aa30.26■■■□□ 2.43
USF2-211ENST00000599471 TARBP1Q13395 1621 aaKnown RBP30.23■■■□□ 2.43
USF2-211ENST00000599471 ZNF608Q9ULD9 1512 aaPredicted RBP30.22■■■□□ 2.43
USF2-211ENST00000599471 EIF4G3O43432 1585 aaKnown RBP30.13■■■□□ 2.41
USF2-211ENST00000599471 AQRO60306 1485 aaKnown RBP eCLIP30.1■■■□□ 2.412e-7■□□□□ 9.8
USF2-211ENST00000599471 TDRD9Q8NDG6 1382 aaKnown RBP30.09■■■□□ 2.41
USF2-211ENST00000599471 WDR97A6NE52 1622 aa30.07■■■□□ 2.4
USF2-211ENST00000599471 ABCA10Q8WWZ4 1543 aa30.01■■■□□ 2.39
USF2-211ENST00000599471 GAPVD1Q14C86 1478 aa29.92■■■□□ 2.38
USF2-211ENST00000599471 TRIM41Q8WV44 630 aa29.91■■■□□ 2.38
USF2-211ENST00000599471 PBRM1Q86U86 1689 aa29.9■■■□□ 2.38
USF2-211ENST00000599471 ABCA5Q8WWZ7 1642 aa29.89■■■□□ 2.38
USF2-211ENST00000599471 GRIN2BQ13224 1484 aa29.86■■■□□ 2.37
USF2-211ENST00000599471 SNAPC4Q5SXM2 1469 aa29.83■■■□□ 2.37
USF2-211ENST00000599471 FBLN2P98095 1184 aa29.8■■■□□ 2.36
USF2-211ENST00000599471 CHD1O14646 1710 aa29.76■■■□□ 2.35
USF2-211ENST00000599471 MAGI1Q96QZ7 1491 aaPredicted RBP29.73■■■□□ 2.35
USF2-211ENST00000599471 KIF27Q86VH2 1401 aa29.71■■■□□ 2.35
USF2-211ENST00000599471 CHMP7Q8WUX9 453 aaPredicted RBP29.67■■■□□ 2.34
USF2-211ENST00000599471 CHIC1Q5VXU3 224 aa29.66■■■□□ 2.34
USF2-211ENST00000599471 ERICH3Q5RHP9 1530 aa29.66■■■□□ 2.34
USF2-211ENST00000599471 OSCARQ8IYS5 282 aa29.65■■■□□ 2.34
USF2-211ENST00000599471 ADAMTS12P58397 1594 aa29.62■■■□□ 2.33
USF2-211ENST00000599471 SYNJ2O15056 1496 aa29.61■■■□□ 2.33
USF2-211ENST00000599471 DNAJC5Q9H3Z4 198 aa29.59■■■□□ 2.33
USF2-211ENST00000599471 RUSC2Q8N2Y8 1516 aa29.57■■■□□ 2.32
USF2-211ENST00000599471 FHAD1B1AJZ9 1412 aa29.54■■■□□ 2.32
USF2-211ENST00000599471 IGF1RP08069 1367 aa29.52■■■□□ 2.32
USF2-211ENST00000599471 CUL7Q14999 1698 aa29.48■■■□□ 2.31
USF2-211ENST00000599471 GRIN2AQ12879 1464 aa29.48■■■□□ 2.31
USF2-211ENST00000599471 CARMIL1Q5VZK9 1371 aa29.4■■■□□ 2.3
USF2-211ENST00000599471 FAM9AQ8IZU1 332 aaPredicted RBP29.4■■■□□ 2.3
USF2-211ENST00000599471 CEP170Q5SW79 1584 aa29.35■■■□□ 2.29
USF2-211ENST00000599471 CLASP1Q7Z460 1538 aa29.31■■■□□ 2.28
USF2-211ENST00000599471 NUP160Q12769 1436 aa29.28■■■□□ 2.28
USF2-211ENST00000599471 EEA1Q15075 1411 aa29.26■■■□□ 2.27
USF2-211ENST00000599471 RAPGEF2Q9Y4G8 1499 aa29.25■■■□□ 2.27
USF2-211ENST00000599471 CSRNP3Q8WYN3 585 aa29.25■■■□□ 2.27
USF2-211ENST00000599471 RIMBP3CA6NJZ7 1639 aa29.19■■■□□ 2.26
USF2-211ENST00000599471 RIMBP3BA6NNM3 1639 aa29.19■■■□□ 2.26
USF2-211ENST00000599471 RIMBP3Q9UFD9 1639 aa29.19■■■□□ 2.26
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms