RNA–Protein interactions for RNA: ENST00000598619.1

HMGN2P46-208, Transcript of high mobility group nucleosomal binding domain 2 pseudogene 46, humanhuman

BASIC

Gene HMGN2P46, Length 490 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN2P46-208ENST00000598619 NISCHQ9Y2I1 1504 aa21.54■■□□□ 1.04
HMGN2P46-208ENST00000598619 CCDC180Q9P1Z9 1646 aa19.17■□□□□ 0.66
HMGN2P46-208ENST00000598619 ABCC9O60706 1549 aa18.97■□□□□ 0.63
HMGN2P46-208ENST00000598619 DCAF8L2P0C7V8 631 aa18.23■□□□□ 0.51
HMGN2P46-208ENST00000598619 RB1CC1Q8TDY2 1594 aa18.15■□□□□ 0.5
HMGN2P46-208ENST00000598619 NACADO15069 1562 aa18.08■□□□□ 0.48
HMGN2P46-208ENST00000598619 ZCCHC6Q5VYS8 1495 aaKnown RBP17.88■□□□□ 0.45
HMGN2P46-208ENST00000598619 MYO15BQ96JP2 1530 aa17.88■□□□□ 0.45
HMGN2P46-208ENST00000598619 DCAF1Q9Y4B6 1507 aa17.77■□□□□ 0.43
HMGN2P46-208ENST00000598619 PABPN1Q86U42 306 aaKnown RBP eCLIP17.75■□□□□ 0.43
HMGN2P46-208ENST00000598619 UNC13AQ9UPW8 1703 aa17.7■□□□□ 0.42
HMGN2P46-208ENST00000598619 BICRAQ9NZM4 1560 aa17.57■□□□□ 0.4
HMGN2P46-208ENST00000598619 SCRIBQ14160 1630 aa17.54■□□□□ 0.4
HMGN2P46-208ENST00000598619 DNAJC5BQ9UF47 199 aa17.52■□□□□ 0.4
HMGN2P46-208ENST00000598619 SHROOM4Q9ULL8 1493 aa17.34■□□□□ 0.37
HMGN2P46-208ENST00000598619 EIF4G1Q04637 1599 aaKnown RBP17.14■□□□□ 0.33
HMGN2P46-208ENST00000598619 CC2D2AQ9P2K1 1620 aa17.12■□□□□ 0.33
HMGN2P46-208ENST00000598619 CECR2Q9BXF3 1484 aa17.04■□□□□ 0.32
HMGN2P46-208ENST00000598619 SMARCA4P51532 1647 aa16.74■□□□□ 0.27
HMGN2P46-208ENST00000598619 BAZ1AQ9NRL2 1556 aaPredicted RBP16.71■□□□□ 0.27
HMGN2P46-208ENST00000598619 NCAPD3P42695 1498 aa16.68■□□□□ 0.26
HMGN2P46-208ENST00000598619 ATAD2BQ9ULI0 1458 aa16.68■□□□□ 0.26
HMGN2P46-208ENST00000598619 SMARCA2P51531 1590 aa16.65■□□□□ 0.26
HMGN2P46-208ENST00000598619 MROH2BQ7Z745 1585 aa16.61■□□□□ 0.25
HMGN2P46-208ENST00000598619 HMGXB3Q12766 1538 aa16.56■□□□□ 0.24
HMGN2P46-208ENST00000598619 BAZ1BQ9UIG0 1483 aaKnown RBP16.56■□□□□ 0.24
HMGN2P46-208ENST00000598619 PEG3Q9GZU2 1588 aa16.52■□□□□ 0.24
HMGN2P46-208ENST00000598619 WIZO95785 1651 aa16.44■□□□□ 0.22
HMGN2P46-208ENST00000598619 RSF1Q96T23 1441 aaPredicted RBP16.37■□□□□ 0.21
HMGN2P46-208ENST00000598619 ERCC6Q03468 1493 aa16.37■□□□□ 0.21
HMGN2P46-208ENST00000598619 NESP48681 1621 aa16.36■□□□□ 0.21
HMGN2P46-208ENST00000598619 LAMC3Q9Y6N6 1575 aa16.27■□□□□ 0.2
HMGN2P46-208ENST00000598619 CADPSQ9ULU8 1353 aa16.23■□□□□ 0.19
HMGN2P46-208ENST00000598619 TOP2AP11388 1531 aaKnown RBP16.22■□□□□ 0.19
HMGN2P46-208ENST00000598619 PDS5BQ9NTI5 1447 aa16.2■□□□□ 0.18
HMGN2P46-208ENST00000598619 CUX2O14529 1486 aa16.18■□□□□ 0.18
HMGN2P46-208ENST00000598619 KIF21AQ7Z4S6 1674 aa16.14■□□□□ 0.17
HMGN2P46-208ENST00000598619 THOC2Q8NI27 1593 aaKnown RBP16.09■□□□□ 0.17
HMGN2P46-208ENST00000598619 CCDC88BA6NC98 1476 aa16.07■□□□□ 0.16
HMGN2P46-208ENST00000598619 CFTRP13569 1480 aa16.07■□□□□ 0.16
HMGN2P46-208ENST00000598619 FANCD2Q9BXW9 1451 aa16.03■□□□□ 0.16
HMGN2P46-208ENST00000598619 CEP164Q9UPV0 1460 aa16.03■□□□□ 0.16
HMGN2P46-208ENST00000598619 MRC2Q9UBG0 1479 aa16.02■□□□□ 0.15
HMGN2P46-208ENST00000598619 SUPT5HO00267 1087 aaKnown RBP15.99■□□□□ 0.15
HMGN2P46-208ENST00000598619 WDR62O43379 1518 aa15.94■□□□□ 0.14
HMGN2P46-208ENST00000598619 PRDM2Q13029 1718 aa15.91■□□□□ 0.14
HMGN2P46-208ENST00000598619 DNAJC5Q9H3Z4 198 aa15.88■□□□□ 0.13
HMGN2P46-208ENST00000598619 URB2Q14146 1524 aaKnown RBP15.86■□□□□ 0.13
HMGN2P46-208ENST00000598619 AEBP2Q6ZN18 517 aaPredicted RBP15.85■□□□□ 0.13
HMGN2P46-208ENST00000598619 ABCC8Q09428 1581 aa15.75■□□□□ 0.11
HMGN2P46-208ENST00000598619 TOPBP1Q92547 1522 aa15.75■□□□□ 0.11
HMGN2P46-208ENST00000598619 DNMBPQ6XZF7 1577 aa15.71■□□□□ 0.11
HMGN2P46-208ENST00000598619 IFT140Q96RY7 1462 aa15.69■□□□□ 0.1
HMGN2P46-208ENST00000598619 ZNF608Q9ULD9 1512 aaPredicted RBP15.63■□□□□ 0.09
HMGN2P46-208ENST00000598619 POLA1P09884 1462 aaPredicted RBP15.6■□□□□ 0.09
HMGN2P46-208ENST00000598619 SOGA1O94964 1423 aa15.59■□□□□ 0.09
HMGN2P46-208ENST00000598619 CUX1P39880 1505 aa15.58■□□□□ 0.09
HMGN2P46-208ENST00000598619 RAD54L2Q9Y4B4 1467 aa15.58■□□□□ 0.08
HMGN2P46-208ENST00000598619 OSCARQ8IYS5 282 aa15.57■□□□□ 0.08
HMGN2P46-208ENST00000598619 FGD5Q6ZNL6 1462 aa15.57■□□□□ 0.08
HMGN2P46-208ENST00000598619 TARBP1Q13395 1621 aaKnown RBP15.57■□□□□ 0.08
HMGN2P46-208ENST00000598619 AQRO60306 1485 aaKnown RBP eCLIP15.56■□□□□ 0.08
HMGN2P46-208ENST00000598619 EIF4G3O43432 1585 aaKnown RBP15.55■□□□□ 0.08
HMGN2P46-208ENST00000598619 TDRD9Q8NDG6 1382 aaKnown RBP15.52■□□□□ 0.08
HMGN2P46-208ENST00000598619 FBLN2P98095 1184 aa15.48■□□□□ 0.07
HMGN2P46-208ENST00000598619 WRNQ14191 1432 aaPredicted RBP eCLIP15.46■□□□□ 0.07
HMGN2P46-208ENST00000598619 WDR97A6NE52 1622 aa15.42■□□□□ 0.06
HMGN2P46-208ENST00000598619 TOP2BQ02880 1626 aa15.41■□□□□ 0.06
HMGN2P46-208ENST00000598619 SYNJ1O43426 1573 aa15.41■□□□□ 0.06
HMGN2P46-208ENST00000598619 BIVM-ERCC5R4GMW8 1640 aa15.4■□□□□ 0.06
HMGN2P46-208ENST00000598619 SNAPC4Q5SXM2 1469 aa15.4■□□□□ 0.06
HMGN2P46-208ENST00000598619 CHMP7Q8WUX9 453 aaPredicted RBP15.39■□□□□ 0.05
HMGN2P46-208ENST00000598619 TRIM41Q8WV44 630 aa15.39■□□□□ 0.05
HMGN2P46-208ENST00000598619 CHD1O14646 1710 aa15.39■□□□□ 0.05
HMGN2P46-208ENST00000598619 GRIN2BQ13224 1484 aa15.39■□□□□ 0.05
HMGN2P46-208ENST00000598619 GAPVD1Q14C86 1478 aa15.39■□□□□ 0.05
HMGN2P46-208ENST00000598619 ABCA10Q8WWZ4 1543 aa15.38■□□□□ 0.05
HMGN2P46-208ENST00000598619 PBRM1Q86U86 1689 aa15.34■□□□□ 0.05
HMGN2P46-208ENST00000598619 MAGI1Q96QZ7 1491 aaPredicted RBP15.33■□□□□ 0.05
HMGN2P46-208ENST00000598619 ABCA5Q8WWZ7 1642 aa15.32■□□□□ 0.04
HMGN2P46-208ENST00000598619 SYNJ2O15056 1496 aa15.29■□□□□ 0.04
HMGN2P46-208ENST00000598619 RIMBP3CA6NJZ7 1639 aa15.28■□□□□ 0.04
HMGN2P46-208ENST00000598619 RIMBP3BA6NNM3 1639 aa15.28■□□□□ 0.04
HMGN2P46-208ENST00000598619 RIMBP3Q9UFD9 1639 aa15.28■□□□□ 0.04
HMGN2P46-208ENST00000598619 ARHGEF11O15085 1522 aa15.25■□□□□ 0.03
HMGN2P46-208ENST00000598619 CYB5RLQ6IPT4 315 aa15.21■□□□□ 0.03
HMGN2P46-208ENST00000598619 ERICH3Q5RHP9 1530 aa15.2■□□□□ 0.02
HMGN2P46-208ENST00000598619 ADAMTS12P58397 1594 aa15.19■□□□□ 0.02
HMGN2P46-208ENST00000598619 FHAD1B1AJZ9 1412 aa15.19■□□□□ 0.02
HMGN2P46-208ENST00000598619 CLASP1Q7Z460 1538 aa15.18■□□□□ 0.02
HMGN2P46-208ENST00000598619 GRIN2AQ12879 1464 aa15.18■□□□□ 0.02
HMGN2P46-208ENST00000598619 KIF27Q86VH2 1401 aa15.16■□□□□ 0.02
HMGN2P46-208ENST00000598619 ARAP1Q96P48 1450 aa15.11■□□□□ 0.01
HMGN2P46-208ENST00000598619 IGF1RP08069 1367 aa15.11■□□□□ 0.01
HMGN2P46-208ENST00000598619 CEP170Q5SW79 1584 aa15.1■□□□□ 0.01
HMGN2P46-208ENST00000598619 NUP160Q12769 1436 aa15.09■□□□□ 0.01
HMGN2P46-208ENST00000598619 CUL7Q14999 1698 aa15.04■□□□□ -0
HMGN2P46-208ENST00000598619 CARMIL1Q5VZK9 1371 aa15.03■□□□□ -0
HMGN2P46-208ENST00000598619 JPH4Q96JJ6 628 aa15.02■□□□□ -0
HMGN2P46-208ENST00000598619 ERCC6L2Q5T890 1561 aa15□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms