RNA–Protein interactions for RNA: ENST00000597671.5

USF2-209, Transcript of upstream transcription factor 2, c-fos interacting, humanhuman

TSL 5

Gene USF2, Length 464 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF2-209ENST00000597671 NISCHQ9Y2I1 1504 aa16.59■□□□□ 0.25
USF2-209ENST00000597671 AEBP2Q6ZN18 517 aaPredicted RBP16.55■□□□□ 0.24
USF2-209ENST00000597671 ABCC9O60706 1549 aa16.11■□□□□ 0.17
USF2-209ENST00000597671 DNAJC5BQ9UF47 199 aa15.82■□□□□ 0.12
USF2-209ENST00000597671 CHIC1Q5VXU3 224 aa15.51■□□□□ 0.07
USF2-209ENST00000597671 CCDC180Q9P1Z9 1646 aa15.24■□□□□ 0.03
USF2-209ENST00000597671 DNAJC5Q9H3Z4 198 aa15.01□□□□□ -0.01
USF2-209ENST00000597671 RB1CC1Q8TDY2 1594 aa14.89□□□□□ -0.03
USF2-209ENST00000597671 PABPN1Q86U42 306 aaKnown RBP eCLIP14.85□□□□□ -0.03
USF2-209ENST00000597671 UNC13AQ9UPW8 1703 aa14.69□□□□□ -0.06
USF2-209ENST00000597671 NACADO15069 1562 aa14.56□□□□□ -0.08
USF2-209ENST00000597671 BICRAQ9NZM4 1560 aa14.56□□□□□ -0.08
USF2-209ENST00000597671 CECR2Q9BXF3 1484 aa14.55□□□□□ -0.08
USF2-209ENST00000597671 CC2D2AQ9P2K1 1620 aa14.49□□□□□ -0.09
USF2-209ENST00000597671 DCAF8L2P0C7V8 631 aa14.37□□□□□ -0.11
USF2-209ENST00000597671 SENP3Q9H4L4 574 aaPredicted RBP14.25□□□□□ -0.13
USF2-209ENST00000597671 EIF4G1Q04637 1599 aaKnown RBP14.25□□□□□ -0.13
USF2-209ENST00000597671 TRIM41Q8WV44 630 aa14.13□□□□□ -0.15
USF2-209ENST00000597671 CUX2O14529 1486 aa14.12□□□□□ -0.15
USF2-209ENST00000597671 SHROOM4Q9ULL8 1493 aa14.12□□□□□ -0.15
USF2-209ENST00000597671 MYO15BQ96JP2 1530 aa14.02□□□□□ -0.16
USF2-209ENST00000597671 PHF23Q9BUL5 403 aaPredicted RBP13.98□□□□□ -0.17
USF2-209ENST00000597671 SCRIBQ14160 1630 aa13.94□□□□□ -0.18
USF2-209ENST00000597671 ERCC6Q03468 1493 aa13.92□□□□□ -0.18
USF2-209ENST00000597671 THOC2Q8NI27 1593 aaKnown RBP13.64□□□□□ -0.23
USF2-209ENST00000597671 NESP48681 1621 aa13.63□□□□□ -0.23
USF2-209ENST00000597671 ZCCHC6Q5VYS8 1495 aaKnown RBP13.59□□□□□ -0.23
USF2-209ENST00000597671 DCAF1Q9Y4B6 1507 aa13.57□□□□□ -0.24
USF2-209ENST00000597671 SMARCA2P51531 1590 aa13.52□□□□□ -0.25
USF2-209ENST00000597671 KIF21AQ7Z4S6 1674 aa13.45□□□□□ -0.26
USF2-209ENST00000597671 BAZ1AQ9NRL2 1556 aaPredicted RBP13.44□□□□□ -0.26
USF2-209ENST00000597671 NCAPD3P42695 1498 aa13.43□□□□□ -0.26
USF2-209ENST00000597671 RIMBP3CA6NJZ7 1639 aa13.35□□□□□ -0.27
USF2-209ENST00000597671 RIMBP3BA6NNM3 1639 aa13.35□□□□□ -0.27
USF2-209ENST00000597671 RIMBP3Q9UFD9 1639 aa13.35□□□□□ -0.27
USF2-209ENST00000597671 ATAD2BQ9ULI0 1458 aa13.33□□□□□ -0.28
USF2-209ENST00000597671 FOXD1Q16676 465 aa13.31□□□□□ -0.28
USF2-209ENST00000597671 HMGXB3Q12766 1538 aa13.3□□□□□ -0.28
USF2-209ENST00000597671 LAMC3Q9Y6N6 1575 aa13.3□□□□□ -0.28
USF2-209ENST00000597671 OSCARQ8IYS5 282 aa13.29□□□□□ -0.28
USF2-209ENST00000597671 TRHP20396 242 aaPredicted RBP13.24□□□□□ -0.29
USF2-209ENST00000597671 WDR62O43379 1518 aa13.21□□□□□ -0.29
USF2-209ENST00000597671 MRC2Q9UBG0 1479 aa13.21□□□□□ -0.3
USF2-209ENST00000597671 PDS5BQ9NTI5 1447 aa13.21□□□□□ -0.3
USF2-209ENST00000597671 POTEDQ86YR6 584 aa13.2□□□□□ -0.3
USF2-209ENST00000597671 ARHGEF11O15085 1522 aa13.19□□□□□ -0.3
USF2-209ENST00000597671 BAZ1BQ9UIG0 1483 aaKnown RBP13.17□□□□□ -0.3
USF2-209ENST00000597671 SMARCA4P51532 1647 aa13.16□□□□□ -0.3
USF2-209ENST00000597671 CYB5RLQ6IPT4 315 aa13.11□□□□□ -0.31
USF2-209ENST00000597671 ILDR1Q86SU0 546 aaPredicted RBP13.06□□□□□ -0.32
USF2-209ENST00000597671 ARAP1Q96P48 1450 aa13.04□□□□□ -0.32
USF2-209ENST00000597671 CADPSQ9ULU8 1353 aa13□□□□□ -0.33
USF2-209ENST00000597671 CEP164Q9UPV0 1460 aa12.99□□□□□ -0.33
USF2-209ENST00000597671 PEG3Q9GZU2 1588 aa12.97□□□□□ -0.33
USF2-209ENST00000597671 FANCD2Q9BXW9 1451 aa12.91□□□□□ -0.34
USF2-209ENST00000597671 URB2Q14146 1524 aaKnown RBP12.88□□□□□ -0.35
USF2-209ENST00000597671 ZNF608Q9ULD9 1512 aaPredicted RBP12.88□□□□□ -0.35
USF2-209ENST00000597671 CHD1O14646 1710 aa12.87□□□□□ -0.35
USF2-209ENST00000597671 MROH2BQ7Z745 1585 aa12.82□□□□□ -0.36
USF2-209ENST00000597671 EIF4G3O43432 1585 aaKnown RBP12.78□□□□□ -0.36
USF2-209ENST00000597671 RSF1Q96T23 1441 aaPredicted RBP12.77□□□□□ -0.37
USF2-209ENST00000597671 IFT140Q96RY7 1462 aa12.72□□□□□ -0.37
USF2-209ENST00000597671 CFTRP13569 1480 aa12.7□□□□□ -0.38
USF2-209ENST00000597671 FBLN2P98095 1184 aa12.69□□□□□ -0.38
USF2-209ENST00000597671 MSH5O43196 834 aa12.68□□□□□ -0.38
USF2-209ENST00000597671 WIZO95785 1651 aa12.67□□□□□ -0.38
USF2-209ENST00000597671 AQRO60306 1485 aaKnown RBP eCLIP12.64□□□□□ -0.392e-7■□□□□ 9.8
USF2-209ENST00000597671 CLASP1Q7Z460 1538 aa12.63□□□□□ -0.39
USF2-209ENST00000597671 KDM4FA0A1W2PPD8 638 aa12.6□□□□□ -0.39
USF2-209ENST00000597671 PRDM2Q13029 1718 aa12.59□□□□□ -0.39
USF2-209ENST00000597671 TOPBP1Q92547 1522 aa12.58□□□□□ -0.4
USF2-209ENST00000597671 KIF13AQ9H1H9 1805 aa12.57□□□□□ -0.4
USF2-209ENST00000597671 TARBP1Q13395 1621 aaKnown RBP12.55□□□□□ -0.4
USF2-209ENST00000597671 GAPVD1Q14C86 1478 aa12.54□□□□□ -0.4
USF2-209ENST00000597671 SYNJ1O43426 1573 aa12.52□□□□□ -0.41
USF2-209ENST00000597671 SNAPC4Q5SXM2 1469 aa12.49□□□□□ -0.41
USF2-209ENST00000597671 ERCC6L2Q5T890 1561 aa12.46□□□□□ -0.42
USF2-209ENST00000597671 DNMBPQ6XZF7 1577 aa12.46□□□□□ -0.42
USF2-209ENST00000597671 HECW2Q9P2P5 1572 aa12.45□□□□□ -0.42
USF2-209ENST00000597671 TDRD9Q8NDG6 1382 aaKnown RBP12.42□□□□□ -0.42
USF2-209ENST00000597671 RAD54L2Q9Y4B4 1467 aa12.41□□□□□ -0.42
USF2-209ENST00000597671 CHMP7Q8WUX9 453 aaPredicted RBP12.41□□□□□ -0.42
USF2-209ENST00000597671 POLA1P09884 1462 aaPredicted RBP12.4□□□□□ -0.42
USF2-209ENST00000597671 TOP2AP11388 1531 aaKnown RBP12.38□□□□□ -0.43
USF2-209ENST00000597671 KDM6BO15054 1643 aa12.38□□□□□ -0.43
USF2-209ENST00000597671 ABCC8Q09428 1581 aa12.38□□□□□ -0.43
USF2-209ENST00000597671 LMTK3Q96Q04 1460 aa12.36□□□□□ -0.43
USF2-209ENST00000597671 FBXO41Q8TF61 875 aa12.36□□□□□ -0.43
USF2-209ENST00000597671 MAGI1Q96QZ7 1491 aaPredicted RBP12.34□□□□□ -0.43
USF2-209ENST00000597671 SYNJ2O15056 1496 aa12.34□□□□□ -0.43
USF2-209ENST00000597671 ADGRL1O94910 1474 aa12.33□□□□□ -0.44
USF2-209ENST00000597671 TSPOAP1O95153 1857 aa12.32□□□□□ -0.44
USF2-209ENST00000597671 FAM69CQ0P6D2 419 aa12.3□□□□□ -0.44
USF2-209ENST00000597671 PIAS4Q8N2W9 510 aaPredicted RBP12.3□□□□□ -0.44
USF2-209ENST00000597671 PBRM1Q86U86 1689 aa12.29□□□□□ -0.44
USF2-209ENST00000597671 SOGA1O94964 1423 aa12.28□□□□□ -0.44
USF2-209ENST00000597671 CEP170Q5SW79 1584 aa12.28□□□□□ -0.44
USF2-209ENST00000597671 DIP2BQ9P265 1576 aa12.28□□□□□ -0.44
USF2-209ENST00000597671 GRIN2BQ13224 1484 aa12.27□□□□□ -0.44
USF2-209ENST00000597671 ABCC10Q5T3U5 1492 aa12.27□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms