RNA–Protein interactions for RNA: ENST00000597578.1

FENDRR-204, FOXF1 adjacent non-coding developmental regulatory RNA, humanhuman

TSL 4

Gene FENDRR, Length 553 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FENDRR-204ENST00000597578 NISCHQ9Y2I1 1504 aa50.45■■■■■ 5.67
FENDRR-204ENST00000597578 CCDC180Q9P1Z9 1646 aa44.88■■■■■ 4.78
FENDRR-204ENST00000597578 ABCC9O60706 1549 aa43.48■■■■■ 4.55
FENDRR-204ENST00000597578 ZCCHC6Q5VYS8 1495 aaKnown RBP42.08■■■■■ 4.33
FENDRR-204ENST00000597578 RB1CC1Q8TDY2 1594 aa42.05■■■■■ 4.32
FENDRR-204ENST00000597578 DCAF8L2P0C7V8 631 aa42.04■■■■■ 4.32
FENDRR-204ENST00000597578 NACADO15069 1562 aa42.04■■■■■ 4.32
FENDRR-204ENST00000597578 MYO15BQ96JP2 1530 aa41.82■■■■■ 4.29
FENDRR-204ENST00000597578 DCAF1Q9Y4B6 1507 aa41.77■■■■■ 4.28
FENDRR-204ENST00000597578 UNC13AQ9UPW8 1703 aa41.22■■■■■ 4.19
FENDRR-204ENST00000597578 SCRIBQ14160 1630 aa40.91■■■■■ 4.14
FENDRR-204ENST00000597578 BICRAQ9NZM4 1560 aa40.67■■■■■ 4.1
FENDRR-204ENST00000597578 PABPN1Q86U42 306 aaKnown RBP eCLIP40.6■■■■■ 4.09
FENDRR-204ENST00000597578 DNAJC5BQ9UF47 199 aa40.39■■■■■ 4.06
FENDRR-204ENST00000597578 SHROOM4Q9ULL8 1493 aa40.32■■■■■ 4.04
FENDRR-204ENST00000597578 EIF4G1Q04637 1599 aaKnown RBP39.6■■■■□ 3.93
FENDRR-204ENST00000597578 CC2D2AQ9P2K1 1620 aa39.4■■■■□ 3.9
FENDRR-204ENST00000597578 CECR2Q9BXF3 1484 aa39.21■■■■□ 3.87
FENDRR-204ENST00000597578 SMARCA4P51532 1647 aa39.15■■■■□ 3.86
FENDRR-204ENST00000597578 BAZ1AQ9NRL2 1556 aaPredicted RBP39.14■■■■□ 3.86
FENDRR-204ENST00000597578 MROH2BQ7Z745 1585 aa38.87■■■■□ 3.81
FENDRR-204ENST00000597578 SMARCA2P51531 1590 aa38.84■■■■□ 3.81
FENDRR-204ENST00000597578 ATAD2BQ9ULI0 1458 aa38.76■■■■□ 3.8
FENDRR-204ENST00000597578 PEG3Q9GZU2 1588 aa38.71■■■■□ 3.79
FENDRR-204ENST00000597578 NCAPD3P42695 1498 aa38.68■■■■□ 3.78
FENDRR-204ENST00000597578 HMGXB3Q12766 1538 aa38.61■■■■□ 3.77
FENDRR-204ENST00000597578 WIZO95785 1651 aa38.56■■■■□ 3.76
FENDRR-204ENST00000597578 BAZ1BQ9UIG0 1483 aaKnown RBP38.54■■■■□ 3.76
FENDRR-204ENST00000597578 RSF1Q96T23 1441 aaPredicted RBP38.49■■■■□ 3.75
FENDRR-204ENST00000597578 TOP2AP11388 1531 aaKnown RBP38.14■■■■□ 3.7
FENDRR-204ENST00000597578 SUPT5HO00267 1087 aaKnown RBP37.8■■■■□ 3.64
FENDRR-204ENST00000597578 LAMC3Q9Y6N6 1575 aa37.74■■■■□ 3.63
FENDRR-204ENST00000597578 NESP48681 1621 aa37.69■■■■□ 3.62
FENDRR-204ENST00000597578 CCDC88BA6NC98 1476 aa37.63■■■■□ 3.61
FENDRR-204ENST00000597578 CADPSQ9ULU8 1353 aa37.58■■■■□ 3.61
FENDRR-204ENST00000597578 ERCC6Q03468 1493 aa37.52■■■■□ 3.6
FENDRR-204ENST00000597578 PRDM2Q13029 1718 aa37.48■■■■□ 3.59
FENDRR-204ENST00000597578 CFTRP13569 1480 aa37.43■■■■□ 3.58
FENDRR-204ENST00000597578 KIF21AQ7Z4S6 1674 aa37.42■■■■□ 3.58
FENDRR-204ENST00000597578 PDS5BQ9NTI5 1447 aa37.42■■■■□ 3.58
FENDRR-204ENST00000597578 DNAJC5Q9H3Z4 198 aa37.28■■■■□ 3.56
FENDRR-204ENST00000597578 FANCD2Q9BXW9 1451 aa37.2■■■■□ 3.54
FENDRR-204ENST00000597578 CEP164Q9UPV0 1460 aa37.16■■■■□ 3.54
FENDRR-204ENST00000597578 THOC2Q8NI27 1593 aaKnown RBP37.12■■■■□ 3.53
FENDRR-204ENST00000597578 MRC2Q9UBG0 1479 aa37.02■■■■□ 3.52
FENDRR-204ENST00000597578 CUX2O14529 1486 aa36.97■■■■□ 3.51
FENDRR-204ENST00000597578 WDR62O43379 1518 aa36.89■■■■□ 3.5
FENDRR-204ENST00000597578 URB2Q14146 1524 aaKnown RBP36.78■■■■□ 3.48
FENDRR-204ENST00000597578 ABCC8Q09428 1581 aa36.71■■■■□ 3.47
FENDRR-204ENST00000597578 DNMBPQ6XZF7 1577 aa36.68■■■■□ 3.46
FENDRR-204ENST00000597578 TOPBP1Q92547 1522 aa36.64■■■■□ 3.46
FENDRR-204ENST00000597578 CUX1P39880 1505 aa36.46■■■■□ 3.43
FENDRR-204ENST00000597578 WRNQ14191 1432 aaPredicted RBP eCLIP36.34■■■■□ 3.41
FENDRR-204ENST00000597578 IFT140Q96RY7 1462 aa36.34■■■■□ 3.41
FENDRR-204ENST00000597578 POLA1P09884 1462 aaPredicted RBP36.33■■■■□ 3.41
FENDRR-204ENST00000597578 BIVM-ERCC5R4GMW8 1640 aa36.33■■■■□ 3.41
FENDRR-204ENST00000597578 FGD5Q6ZNL6 1462 aa36.31■■■■□ 3.4
FENDRR-204ENST00000597578 TOP2BQ02880 1626 aa36.3■■■■□ 3.4
FENDRR-204ENST00000597578 SYNJ1O43426 1573 aa36.27■■■■□ 3.4
FENDRR-204ENST00000597578 TARBP1Q13395 1621 aaKnown RBP36.25■■■■□ 3.39
FENDRR-204ENST00000597578 SOGA1O94964 1423 aa36.19■■■■□ 3.38
FENDRR-204ENST00000597578 RAD54L2Q9Y4B4 1467 aa36.15■■■■□ 3.38
FENDRR-204ENST00000597578 WDR97A6NE52 1622 aa36.1■■■■□ 3.37
FENDRR-204ENST00000597578 ZNF608Q9ULD9 1512 aaPredicted RBP36.09■■■■□ 3.37
FENDRR-204ENST00000597578 EIF4G3O43432 1585 aaKnown RBP36.09■■■■□ 3.37
FENDRR-204ENST00000597578 ABCA10Q8WWZ4 1543 aa35.97■■■■□ 3.35
FENDRR-204ENST00000597578 AQRO60306 1485 aaKnown RBP eCLIP35.93■■■■□ 3.34
FENDRR-204ENST00000597578 TDRD9Q8NDG6 1382 aaKnown RBP35.91■■■■□ 3.34
FENDRR-204ENST00000597578 PBRM1Q86U86 1689 aa35.88■■■■□ 3.33
FENDRR-204ENST00000597578 ABCA5Q8WWZ7 1642 aa35.85■■■■□ 3.33
FENDRR-204ENST00000597578 GAPVD1Q14C86 1478 aa35.8■■■■□ 3.32
FENDRR-204ENST00000597578 GRIN2BQ13224 1484 aa35.76■■■■□ 3.32
FENDRR-204ENST00000597578 TRIM41Q8WV44 630 aa35.7■■■■□ 3.31
FENDRR-204ENST00000597578 CHD1O14646 1710 aa35.67■■■■□ 3.3
FENDRR-204ENST00000597578 SNAPC4Q5SXM2 1469 aa35.66■■■■□ 3.3
FENDRR-204ENST00000597578 MAGI1Q96QZ7 1491 aaPredicted RBP35.65■■■■□ 3.3
FENDRR-204ENST00000597578 KIF27Q86VH2 1401 aa35.58■■■■□ 3.29
FENDRR-204ENST00000597578 ERICH3Q5RHP9 1530 aa35.57■■■■□ 3.29
FENDRR-204ENST00000597578 FBLN2P98095 1184 aa35.5■■■■□ 3.27
FENDRR-204ENST00000597578 ADAMTS12P58397 1594 aa35.49■■■■□ 3.27
FENDRR-204ENST00000597578 SYNJ2O15056 1496 aa35.48■■■■□ 3.27
FENDRR-204ENST00000597578 OSCARQ8IYS5 282 aa35.46■■■■□ 3.27
FENDRR-204ENST00000597578 CHMP7Q8WUX9 453 aaPredicted RBP35.44■■■■□ 3.26
FENDRR-204ENST00000597578 CUL7Q14999 1698 aa35.41■■■■□ 3.26
FENDRR-204ENST00000597578 CHIC1Q5VXU3 224 aa35.4■■■■□ 3.26
FENDRR-204ENST00000597578 FHAD1B1AJZ9 1412 aa35.39■■■■□ 3.26
FENDRR-204ENST00000597578 IGF1RP08069 1367 aa35.3■■■■□ 3.24
FENDRR-204ENST00000597578 GRIN2AQ12879 1464 aa35.29■■■■□ 3.24
FENDRR-204ENST00000597578 RUSC2Q8N2Y8 1516 aa35.28■■■■□ 3.24
FENDRR-204ENST00000597578 CARMIL1Q5VZK9 1371 aa35.16■■■■□ 3.22
FENDRR-204ENST00000597578 CLASP1Q7Z460 1538 aa35.13■■■■□ 3.21
FENDRR-204ENST00000597578 EEA1Q15075 1411 aa35.13■■■■□ 3.21
FENDRR-204ENST00000597578 CEP170Q5SW79 1584 aa35.12■■■■□ 3.21
FENDRR-204ENST00000597578 NUP160Q12769 1436 aa35.07■■■■□ 3.21
FENDRR-204ENST00000597578 RAPGEF2Q9Y4G8 1499 aa35.03■■■■□ 3.2
FENDRR-204ENST00000597578 CSRNP3Q8WYN3 585 aa34.97■■■■□ 3.19
FENDRR-204ENST00000597578 RIMBP3CA6NJZ7 1639 aa34.95■■■■□ 3.18
FENDRR-204ENST00000597578 RIMBP3BA6NNM3 1639 aa34.95■■■■□ 3.18
FENDRR-204ENST00000597578 RIMBP3Q9UFD9 1639 aa34.95■■■■□ 3.18
FENDRR-204ENST00000597578 FAM9AQ8IZU1 332 aaPredicted RBP34.94■■■■□ 3.18
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms