RNA–Protein interactions for RNA: ENST00000597384.1

AC008878.1-201, humanhuman

TSL 3

Gene AC008878.1, Length 634 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC008878.1-201ENST00000597384 NISCHQ9Y2I1 1504 aa27.02■■□□□ 1.92
AC008878.1-201ENST00000597384 CCDC180Q9P1Z9 1646 aa23.91■■□□□ 1.42
AC008878.1-201ENST00000597384 ABCC9O60706 1549 aa23.39■■□□□ 1.34
AC008878.1-201ENST00000597384 NACADO15069 1562 aa22.52■■□□□ 1.2
AC008878.1-201ENST00000597384 ZCCHC6Q5VYS8 1495 aaKnown RBP22.52■■□□□ 1.2
AC008878.1-201ENST00000597384 DCAF8L2P0C7V8 631 aa22.51■■□□□ 1.19
AC008878.1-201ENST00000597384 RB1CC1Q8TDY2 1594 aa22.5■■□□□ 1.19
AC008878.1-201ENST00000597384 MYO15BQ96JP2 1530 aa22.46■■□□□ 1.19
AC008878.1-201ENST00000597384 DCAF1Q9Y4B6 1507 aa22.37■■□□□ 1.17
AC008878.1-201ENST00000597384 UNC13AQ9UPW8 1703 aa21.94■■□□□ 1.1
AC008878.1-201ENST00000597384 PABPN1Q86U42 306 aaKnown RBP eCLIP21.92■■□□□ 1.1
AC008878.1-201ENST00000597384 BICRAQ9NZM4 1560 aa21.87■■□□□ 1.09
AC008878.1-201ENST00000597384 SCRIBQ14160 1630 aa21.83■■□□□ 1.08
AC008878.1-201ENST00000597384 AEBP2Q6ZN18 517 aaPredicted RBP21.69■■□□□ 1.06
AC008878.1-201ENST00000597384 SHROOM4Q9ULL8 1493 aa21.64■■□□□ 1.05
AC008878.1-201ENST00000597384 DNAJC5BQ9UF47 199 aa21.53■■□□□ 1.04
AC008878.1-201ENST00000597384 EIF4G1Q04637 1599 aaKnown RBP21.27■□□□□ 0.99
AC008878.1-201ENST00000597384 CC2D2AQ9P2K1 1620 aa21.15■□□□□ 0.98
AC008878.1-201ENST00000597384 CECR2Q9BXF3 1484 aa21.07■□□□□ 0.96
AC008878.1-201ENST00000597384 SMARCA4P51532 1647 aa20.91■□□□□ 0.94
AC008878.1-201ENST00000597384 BAZ1AQ9NRL2 1556 aaPredicted RBP20.9■□□□□ 0.94
AC008878.1-201ENST00000597384 NCAPD3P42695 1498 aa20.84■□□□□ 0.93
AC008878.1-201ENST00000597384 ATAD2BQ9ULI0 1458 aa20.84■□□□□ 0.93
AC008878.1-201ENST00000597384 MROH2BQ7Z745 1585 aa20.83■□□□□ 0.92
AC008878.1-201ENST00000597384 CHIC1Q5VXU3 224 aa20.8■□□□□ 0.92
AC008878.1-201ENST00000597384 SMARCA2P51531 1590 aa20.76■□□□□ 0.91
AC008878.1-201ENST00000597384 PEG3Q9GZU2 1588 aa20.75■□□□□ 0.91
AC008878.1-201ENST00000597384 HMGXB3Q12766 1538 aa20.68■□□□□ 0.9
AC008878.1-201ENST00000597384 RSF1Q96T23 1441 aaPredicted RBP20.65■□□□□ 0.9
AC008878.1-201ENST00000597384 BAZ1BQ9UIG0 1483 aaKnown RBP20.62■□□□□ 0.89
AC008878.1-201ENST00000597384 WIZO95785 1651 aa20.55■□□□□ 0.88
AC008878.1-201ENST00000597384 TOP2AP11388 1531 aaKnown RBP20.37■□□□□ 0.85
AC008878.1-201ENST00000597384 NESP48681 1621 aa20.28■□□□□ 0.84
AC008878.1-201ENST00000597384 CADPSQ9ULU8 1353 aa20.22■□□□□ 0.83
AC008878.1-201ENST00000597384 LAMC3Q9Y6N6 1575 aa20.2■□□□□ 0.82
AC008878.1-201ENST00000597384 CCDC88BA6NC98 1476 aa20.16■□□□□ 0.82
AC008878.1-201ENST00000597384 CFTRP13569 1480 aa20.11■□□□□ 0.81
AC008878.1-201ENST00000597384 ERCC6Q03468 1493 aa20.11■□□□□ 0.81
AC008878.1-201ENST00000597384 SUPT5HO00267 1087 aaKnown RBP20.11■□□□□ 0.81
AC008878.1-201ENST00000597384 PDS5BQ9NTI5 1447 aa20.09■□□□□ 0.81
AC008878.1-201ENST00000597384 FANCD2Q9BXW9 1451 aa19.96■□□□□ 0.79
AC008878.1-201ENST00000597384 KIF21AQ7Z4S6 1674 aa19.95■□□□□ 0.78
AC008878.1-201ENST00000597384 CUX2O14529 1486 aa19.92■□□□□ 0.78
AC008878.1-201ENST00000597384 THOC2Q8NI27 1593 aaKnown RBP19.92■□□□□ 0.78
AC008878.1-201ENST00000597384 CEP164Q9UPV0 1460 aa19.89■□□□□ 0.77
AC008878.1-201ENST00000597384 MRC2Q9UBG0 1479 aa19.88■□□□□ 0.77
AC008878.1-201ENST00000597384 WDR62O43379 1518 aa19.81■□□□□ 0.76
AC008878.1-201ENST00000597384 PRDM2Q13029 1718 aa19.8■□□□□ 0.76
AC008878.1-201ENST00000597384 URB2Q14146 1524 aaKnown RBP19.77■□□□□ 0.76
AC008878.1-201ENST00000597384 TOPBP1Q92547 1522 aa19.65■□□□□ 0.74
AC008878.1-201ENST00000597384 ABCC8Q09428 1581 aa19.64■□□□□ 0.73
AC008878.1-201ENST00000597384 DNMBPQ6XZF7 1577 aa19.6■□□□□ 0.73
AC008878.1-201ENST00000597384 CUX1P39880 1505 aa19.52■□□□□ 0.72
AC008878.1-201ENST00000597384 IFT140Q96RY7 1462 aa19.51■□□□□ 0.71
AC008878.1-201ENST00000597384 POLA1P09884 1462 aaPredicted RBP19.48■□□□□ 0.71
AC008878.1-201ENST00000597384 FGD5Q6ZNL6 1462 aa19.44■□□□□ 0.7
AC008878.1-201ENST00000597384 ZNF608Q9ULD9 1512 aaPredicted RBP19.43■□□□□ 0.7
AC008878.1-201ENST00000597384 WRNQ14191 1432 aaPredicted RBP eCLIP19.42■□□□□ 0.7
AC008878.1-201ENST00000597384 SOGA1O94964 1423 aa19.42■□□□□ 0.7
AC008878.1-201ENST00000597384 RAD54L2Q9Y4B4 1467 aa19.41■□□□□ 0.7
AC008878.1-201ENST00000597384 TARBP1Q13395 1621 aaKnown RBP19.41■□□□□ 0.7
AC008878.1-201ENST00000597384 TOP2BQ02880 1626 aa19.35■□□□□ 0.69
AC008878.1-201ENST00000597384 SYNJ1O43426 1573 aa19.35■□□□□ 0.69
AC008878.1-201ENST00000597384 AQRO60306 1485 aaKnown RBP eCLIP19.33■□□□□ 0.686e-7■■■■■ 28.5
AC008878.1-201ENST00000597384 BIVM-ERCC5R4GMW8 1640 aa19.33■□□□□ 0.68
AC008878.1-201ENST00000597384 DNAJC5Q9H3Z4 198 aa19.32■□□□□ 0.68
AC008878.1-201ENST00000597384 TDRD9Q8NDG6 1382 aaKnown RBP19.32■□□□□ 0.68
AC008878.1-201ENST00000597384 EIF4G3O43432 1585 aaKnown RBP19.28■□□□□ 0.68
AC008878.1-201ENST00000597384 ABCA10Q8WWZ4 1543 aa19.27■□□□□ 0.68
AC008878.1-201ENST00000597384 WDR97A6NE52 1622 aa19.24■□□□□ 0.67
AC008878.1-201ENST00000597384 GAPVD1Q14C86 1478 aa19.17■□□□□ 0.66
AC008878.1-201ENST00000597384 GRIN2BQ13224 1484 aa19.16■□□□□ 0.66
AC008878.1-201ENST00000597384 OSCARQ8IYS5 282 aa19.15■□□□□ 0.66
AC008878.1-201ENST00000597384 ABCA5Q8WWZ7 1642 aa19.14■□□□□ 0.66
AC008878.1-201ENST00000597384 SNAPC4Q5SXM2 1469 aa19.12■□□□□ 0.65
AC008878.1-201ENST00000597384 MAGI1Q96QZ7 1491 aaPredicted RBP19.1■□□□□ 0.65
AC008878.1-201ENST00000597384 FBLN2P98095 1184 aa19.04■□□□□ 0.64
AC008878.1-201ENST00000597384 PBRM1Q86U86 1689 aa19.04■□□□□ 0.64
AC008878.1-201ENST00000597384 SYNJ2O15056 1496 aa19.03■□□□□ 0.64
AC008878.1-201ENST00000597384 CHMP7Q8WUX9 453 aaPredicted RBP19.03■□□□□ 0.64
AC008878.1-201ENST00000597384 ERICH3Q5RHP9 1530 aa19.02■□□□□ 0.64
AC008878.1-201ENST00000597384 KIF27Q86VH2 1401 aa19■□□□□ 0.63
AC008878.1-201ENST00000597384 TRIM41Q8WV44 630 aa19■□□□□ 0.63
AC008878.1-201ENST00000597384 CHD1O14646 1710 aa19■□□□□ 0.63
AC008878.1-201ENST00000597384 IGF1RP08069 1367 aa18.99■□□□□ 0.63
AC008878.1-201ENST00000597384 FHAD1B1AJZ9 1412 aa18.98■□□□□ 0.63
AC008878.1-201ENST00000597384 ADAMTS12P58397 1594 aa18.95■□□□□ 0.62
AC008878.1-201ENST00000597384 GRIN2AQ12879 1464 aa18.92■□□□□ 0.62
AC008878.1-201ENST00000597384 RUSC2Q8N2Y8 1516 aa18.89■□□□□ 0.61
AC008878.1-201ENST00000597384 CLASP1Q7Z460 1538 aa18.88■□□□□ 0.61
AC008878.1-201ENST00000597384 NUP160Q12769 1436 aa18.87■□□□□ 0.61
AC008878.1-201ENST00000597384 CARMIL1Q5VZK9 1371 aa18.83■□□□□ 0.61
AC008878.1-201ENST00000597384 CEP170Q5SW79 1584 aa18.81■□□□□ 0.6
AC008878.1-201ENST00000597384 CUL7Q14999 1698 aa18.8■□□□□ 0.6
AC008878.1-201ENST00000597384 ARHGEF11O15085 1522 aa18.79■□□□□ 0.6
AC008878.1-201ENST00000597384 RIMBP3CA6NJZ7 1639 aa18.77■□□□□ 0.6
AC008878.1-201ENST00000597384 RIMBP3BA6NNM3 1639 aa18.77■□□□□ 0.6
AC008878.1-201ENST00000597384 RIMBP3Q9UFD9 1639 aa18.77■□□□□ 0.6
AC008878.1-201ENST00000597384 RAPGEF2Q9Y4G8 1499 aa18.71■□□□□ 0.59
AC008878.1-201ENST00000597384 CSRNP3Q8WYN3 585 aa18.7■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms