RNA–Protein interactions for RNA: ENST00000597251.5

CIB3-204, Transcript of calcium and integrin binding family member 3, humanhuman

TSL 1 (best)

Gene CIB3, Length 595 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIB3-204ENST00000597251 NISCHQ9Y2I1 1504 aa33.19■■■□□ 2.9
CIB3-204ENST00000597251 ABCC9O60706 1549 aa30.8■■■□□ 2.52
CIB3-204ENST00000597251 CCDC180Q9P1Z9 1646 aa30.07■■■□□ 2.4
CIB3-204ENST00000597251 DNAJC5BQ9UF47 199 aa29.55■■■□□ 2.32
CIB3-204ENST00000597251 RB1CC1Q8TDY2 1594 aa28.96■■■□□ 2.23
CIB3-204ENST00000597251 NACADO15069 1562 aa28.58■■■□□ 2.17
CIB3-204ENST00000597251 PABPN1Q86U42 306 aaKnown RBP eCLIP28.58■■■□□ 2.17
CIB3-204ENST00000597251 UNC13AQ9UPW8 1703 aa28.4■■■□□ 2.14
CIB3-204ENST00000597251 DCAF8L2P0C7V8 631 aa28.36■■■□□ 2.13
CIB3-204ENST00000597251 BICRAQ9NZM4 1560 aa28.2■■■□□ 2.1
CIB3-204ENST00000597251 MYO15BQ96JP2 1530 aa27.93■■■□□ 2.06
CIB3-204ENST00000597251 CECR2Q9BXF3 1484 aa27.8■■■□□ 2.04
CIB3-204ENST00000597251 CC2D2AQ9P2K1 1620 aa27.79■■■□□ 2.04
CIB3-204ENST00000597251 SHROOM4Q9ULL8 1493 aa27.64■■■□□ 2.01
CIB3-204ENST00000597251 DNAJC5Q9H3Z4 198 aa27.59■■■□□ 2.01
CIB3-204ENST00000597251 EIF4G1Q04637 1599 aaKnown RBP27.54■■■□□ 2
CIB3-204ENST00000597251 SCRIBQ14160 1630 aa27.41■■□□□ 1.98
CIB3-204ENST00000597251 ZCCHC6Q5VYS8 1495 aaKnown RBP27.35■■□□□ 1.97
CIB3-204ENST00000597251 DCAF1Q9Y4B6 1507 aa27.33■■□□□ 1.97
CIB3-204ENST00000597251 CUX2O14529 1486 aa26.78■■□□□ 1.88
CIB3-204ENST00000597251 ERCC6Q03468 1493 aa26.61■■□□□ 1.85
CIB3-204ENST00000597251 NCAPD3P42695 1498 aa26.41■■□□□ 1.82
CIB3-204ENST00000597251 NESP48681 1621 aa26.28■■□□□ 1.8
CIB3-204ENST00000597251 ATAD2BQ9ULI0 1458 aa26.24■■□□□ 1.79
CIB3-204ENST00000597251 HMGXB3Q12766 1538 aa26.14■■□□□ 1.78
CIB3-204ENST00000597251 THOC2Q8NI27 1593 aaKnown RBP26.13■■□□□ 1.77
CIB3-204ENST00000597251 TRIM41Q8WV44 630 aa26.13■■□□□ 1.77
CIB3-204ENST00000597251 SMARCA2P51531 1590 aa26.1■■□□□ 1.77
CIB3-204ENST00000597251 SMARCA4P51532 1647 aa26.05■■□□□ 1.76
CIB3-204ENST00000597251 BAZ1BQ9UIG0 1483 aaKnown RBP25.94■■□□□ 1.74
CIB3-204ENST00000597251 LAMC3Q9Y6N6 1575 aa25.93■■□□□ 1.74
CIB3-204ENST00000597251 KIF21AQ7Z4S6 1674 aa25.93■■□□□ 1.74
CIB3-204ENST00000597251 BAZ1AQ9NRL2 1556 aaPredicted RBP25.79■■□□□ 1.72
CIB3-204ENST00000597251 PDS5BQ9NTI5 1447 aa25.79■■□□□ 1.72
CIB3-204ENST00000597251 PEG3Q9GZU2 1588 aa25.78■■□□□ 1.72
CIB3-204ENST00000597251 MRC2Q9UBG0 1479 aa25.62■■□□□ 1.69
CIB3-204ENST00000597251 MROH2BQ7Z745 1585 aa25.59■■□□□ 1.69
CIB3-204ENST00000597251 WDR62O43379 1518 aa25.58■■□□□ 1.69
CIB3-204ENST00000597251 CADPSQ9ULU8 1353 aa25.57■■□□□ 1.68
CIB3-204ENST00000597251 OSCARQ8IYS5 282 aa25.45■■□□□ 1.66
CIB3-204ENST00000597251 CEP164Q9UPV0 1460 aa25.38■■□□□ 1.65
CIB3-204ENST00000597251 FANCD2Q9BXW9 1451 aa25.3■■□□□ 1.64
CIB3-204ENST00000597251 WIZO95785 1651 aa25.27■■□□□ 1.64
CIB3-204ENST00000597251 RIMBP3CA6NJZ7 1639 aa25.25■■□□□ 1.63
CIB3-204ENST00000597251 RIMBP3BA6NNM3 1639 aa25.25■■□□□ 1.63
CIB3-204ENST00000597251 RIMBP3Q9UFD9 1639 aa25.25■■□□□ 1.63
CIB3-204ENST00000597251 URB2Q14146 1524 aaKnown RBP25.16■■□□□ 1.62
CIB3-204ENST00000597251 CFTRP13569 1480 aa25.14■■□□□ 1.61
CIB3-204ENST00000597251 ARHGEF11O15085 1522 aa25.07■■□□□ 1.6
CIB3-204ENST00000597251 ZNF608Q9ULD9 1512 aaPredicted RBP24.97■■□□□ 1.59
CIB3-204ENST00000597251 CYB5RLQ6IPT4 315 aa24.94■■□□□ 1.58
CIB3-204ENST00000597251 TRHP20396 242 aaPredicted RBP24.89■■□□□ 1.58
CIB3-204ENST00000597251 IFT140Q96RY7 1462 aa24.89■■□□□ 1.57
CIB3-204ENST00000597251 PRDM2Q13029 1718 aa24.87■■□□□ 1.57
CIB3-204ENST00000597251 TOP2AP11388 1531 aaKnown RBP24.85■■□□□ 1.57
CIB3-204ENST00000597251 EIF4G3O43432 1585 aaKnown RBP24.79■■□□□ 1.56
CIB3-204ENST00000597251 RSF1Q96T23 1441 aaPredicted RBP24.78■■□□□ 1.56
CIB3-204ENST00000597251 ARAP1Q96P48 1450 aa24.78■■□□□ 1.56
CIB3-204ENST00000597251 CHD1O14646 1710 aa24.76■■□□□ 1.55
CIB3-204ENST00000597251 TOPBP1Q92547 1522 aa24.75■■□□□ 1.55
CIB3-204ENST00000597251 AEBP2Q6ZN18 517 aaPredicted RBP24.66■■□□□ 1.54
CIB3-204ENST00000597251 AQRO60306 1485 aaKnown RBP eCLIP24.65■■□□□ 1.54
CIB3-204ENST00000597251 FBLN2P98095 1184 aa24.63■■□□□ 1.53
CIB3-204ENST00000597251 CCDC88BA6NC98 1476 aa24.6■■□□□ 1.53
CIB3-204ENST00000597251 TARBP1Q13395 1621 aaKnown RBP24.6■■□□□ 1.53
CIB3-204ENST00000597251 ABCC8Q09428 1581 aa24.59■■□□□ 1.53
CIB3-204ENST00000597251 DNMBPQ6XZF7 1577 aa24.59■■□□□ 1.53
CIB3-204ENST00000597251 POLA1P09884 1462 aaPredicted RBP24.45■■□□□ 1.51
CIB3-204ENST00000597251 CLASP1Q7Z460 1538 aa24.42■■□□□ 1.5
CIB3-204ENST00000597251 RAD54L2Q9Y4B4 1467 aa24.4■■□□□ 1.5
CIB3-204ENST00000597251 TDRD9Q8NDG6 1382 aaKnown RBP24.39■■□□□ 1.49
CIB3-204ENST00000597251 SNAPC4Q5SXM2 1469 aa24.36■■□□□ 1.49
CIB3-204ENST00000597251 SYNJ1O43426 1573 aa24.33■■□□□ 1.48
CIB3-204ENST00000597251 SOGA1O94964 1423 aa24.32■■□□□ 1.48
CIB3-204ENST00000597251 CHMP7Q8WUX9 453 aaPredicted RBP24.3■■□□□ 1.48
CIB3-204ENST00000597251 MAGI1Q96QZ7 1491 aaPredicted RBP24.24■■□□□ 1.47
CIB3-204ENST00000597251 WDR97A6NE52 1622 aa24.23■■□□□ 1.47
CIB3-204ENST00000597251 GAPVD1Q14C86 1478 aa24.21■■□□□ 1.47
CIB3-204ENST00000597251 FGD5Q6ZNL6 1462 aa24.2■■□□□ 1.47
CIB3-204ENST00000597251 SYNJ2O15056 1496 aa24.18■■□□□ 1.46
CIB3-204ENST00000597251 GRIN2BQ13224 1484 aa24.17■■□□□ 1.46
CIB3-204ENST00000597251 PBRM1Q86U86 1689 aa24.08■■□□□ 1.45
CIB3-204ENST00000597251 CUX1P39880 1505 aa24.08■■□□□ 1.45
CIB3-204ENST00000597251 ERCC6L2Q5T890 1561 aa24.04■■□□□ 1.44
CIB3-204ENST00000597251 KIF13AQ9H1H9 1805 aa23.94■■□□□ 1.42
CIB3-204ENST00000597251 ABCA5Q8WWZ7 1642 aa23.92■■□□□ 1.42
CIB3-204ENST00000597251 CEP170Q5SW79 1584 aa23.9■■□□□ 1.42
CIB3-204ENST00000597251 GRIN2AQ12879 1464 aa23.87■■□□□ 1.41
CIB3-204ENST00000597251 ABCA10Q8WWZ4 1543 aa23.87■■□□□ 1.41
CIB3-204ENST00000597251 NUP160Q12769 1436 aa23.82■■□□□ 1.4
CIB3-204ENST00000597251 SHROOM2Q13796 1616 aa23.81■■□□□ 1.4
CIB3-204ENST00000597251 ADAMTS12P58397 1594 aa23.78■■□□□ 1.4
CIB3-204ENST00000597251 FAM69CQ0P6D2 419 aa23.69■■□□□ 1.38
CIB3-204ENST00000597251 ILDR1Q86SU0 546 aaPredicted RBP23.69■■□□□ 1.38
CIB3-204ENST00000597251 KDM4FA0A1W2PPD8 638 aa23.68■■□□□ 1.38
CIB3-204ENST00000597251 ABCC10Q5T3U5 1492 aa23.66■■□□□ 1.38
CIB3-204ENST00000597251 FHAD1B1AJZ9 1412 aa23.66■■□□□ 1.38
CIB3-204ENST00000597251 PRG4Q92954 1404 aaPredicted RBP23.66■■□□□ 1.38
CIB3-204ENST00000597251 WRNQ14191 1432 aaPredicted RBP eCLIP23.62■■□□□ 1.37
CIB3-204ENST00000597251 DIP2BQ9P265 1576 aa23.6■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms