RNA–Protein interactions for RNA: ENST00000597057.1

EMP3-205, Transcript of epithelial membrane protein 3, humanhuman

TSL 2

Gene EMP3, Length 406 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EMP3-205ENST00000597057 NISCHQ9Y2I1 1504 aa28.48■■■□□ 2.15
EMP3-205ENST00000597057 CCDC180Q9P1Z9 1646 aa25.18■■□□□ 1.62
EMP3-205ENST00000597057 ABCC9O60706 1549 aa24.46■■□□□ 1.51
EMP3-205ENST00000597057 ZCCHC6Q5VYS8 1495 aaKnown RBP23.77■■□□□ 1.4
EMP3-205ENST00000597057 DCAF8L2P0C7V8 631 aa23.7■■□□□ 1.38
EMP3-205ENST00000597057 NACADO15069 1562 aa23.64■■□□□ 1.37
EMP3-205ENST00000597057 RB1CC1Q8TDY2 1594 aa23.6■■□□□ 1.37
EMP3-205ENST00000597057 MYO15BQ96JP2 1530 aa23.58■■□□□ 1.36
EMP3-205ENST00000597057 DCAF1Q9Y4B6 1507 aa23.57■■□□□ 1.36
EMP3-205ENST00000597057 DNAJC5BQ9UF47 199 aa23.25■■□□□ 1.31
EMP3-205ENST00000597057 UNC13AQ9UPW8 1703 aa23.07■■□□□ 1.28
EMP3-205ENST00000597057 SCRIBQ14160 1630 aa23.02■■□□□ 1.28
EMP3-205ENST00000597057 BICRAQ9NZM4 1560 aa22.93■■□□□ 1.26
EMP3-205ENST00000597057 PABPN1Q86U42 306 aaKnown RBP eCLIP22.92■■□□□ 1.26
EMP3-205ENST00000597057 SHROOM4Q9ULL8 1493 aa22.65■■□□□ 1.22
EMP3-205ENST00000597057 EIF4G1Q04637 1599 aaKnown RBP22.28■■□□□ 1.16
EMP3-205ENST00000597057 CECR2Q9BXF3 1484 aa22.19■■□□□ 1.14
EMP3-205ENST00000597057 CC2D2AQ9P2K1 1620 aa22.13■■□□□ 1.13
EMP3-205ENST00000597057 BAZ1AQ9NRL2 1556 aaPredicted RBP22.04■■□□□ 1.12
EMP3-205ENST00000597057 SMARCA4P51532 1647 aa22.04■■□□□ 1.12
EMP3-205ENST00000597057 MROH2BQ7Z745 1585 aa21.97■■□□□ 1.11
EMP3-205ENST00000597057 DNAJC5Q9H3Z4 198 aa21.89■■□□□ 1.09
EMP3-205ENST00000597057 ATAD2BQ9ULI0 1458 aa21.88■■□□□ 1.09
EMP3-205ENST00000597057 NCAPD3P42695 1498 aa21.83■■□□□ 1.09
EMP3-205ENST00000597057 SMARCA2P51531 1590 aa21.83■■□□□ 1.09
EMP3-205ENST00000597057 PEG3Q9GZU2 1588 aa21.82■■□□□ 1.08
EMP3-205ENST00000597057 RSF1Q96T23 1441 aaPredicted RBP21.8■■□□□ 1.08
EMP3-205ENST00000597057 WIZO95785 1651 aa21.73■■□□□ 1.07
EMP3-205ENST00000597057 HMGXB3Q12766 1538 aa21.73■■□□□ 1.07
EMP3-205ENST00000597057 BAZ1BQ9UIG0 1483 aaKnown RBP21.7■■□□□ 1.06
EMP3-205ENST00000597057 TOP2AP11388 1531 aaKnown RBP21.5■■□□□ 1.03
EMP3-205ENST00000597057 SUPT5HO00267 1087 aaKnown RBP21.41■■□□□ 1.02
EMP3-205ENST00000597057 CCDC88BA6NC98 1476 aa21.27■■□□□ 1
EMP3-205ENST00000597057 NESP48681 1621 aa21.26■□□□□ 0.99
EMP3-205ENST00000597057 CADPSQ9ULU8 1353 aa21.21■□□□□ 0.99
EMP3-205ENST00000597057 LAMC3Q9Y6N6 1575 aa21.19■□□□□ 0.98
EMP3-205ENST00000597057 CFTRP13569 1480 aa21.13■□□□□ 0.97
EMP3-205ENST00000597057 CUX2O14529 1486 aa21.05■□□□□ 0.96
EMP3-205ENST00000597057 PDS5BQ9NTI5 1447 aa21.04■□□□□ 0.96
EMP3-205ENST00000597057 ERCC6Q03468 1493 aa21.04■□□□□ 0.96
EMP3-205ENST00000597057 KIF21AQ7Z4S6 1674 aa20.97■□□□□ 0.95
EMP3-205ENST00000597057 FANCD2Q9BXW9 1451 aa20.96■□□□□ 0.95
EMP3-205ENST00000597057 PRDM2Q13029 1718 aa20.92■□□□□ 0.94
EMP3-205ENST00000597057 CEP164Q9UPV0 1460 aa20.89■□□□□ 0.94
EMP3-205ENST00000597057 THOC2Q8NI27 1593 aaKnown RBP20.85■□□□□ 0.93
EMP3-205ENST00000597057 MRC2Q9UBG0 1479 aa20.82■□□□□ 0.92
EMP3-205ENST00000597057 WDR62O43379 1518 aa20.75■□□□□ 0.91
EMP3-205ENST00000597057 URB2Q14146 1524 aaKnown RBP20.75■□□□□ 0.91
EMP3-205ENST00000597057 TOPBP1Q92547 1522 aa20.65■□□□□ 0.9
EMP3-205ENST00000597057 TRIM41Q8WV44 630 aa20.65■□□□□ 0.9
EMP3-205ENST00000597057 ABCC8Q09428 1581 aa20.63■□□□□ 0.89
EMP3-205ENST00000597057 DNMBPQ6XZF7 1577 aa20.63■□□□□ 0.89
EMP3-205ENST00000597057 CUX1P39880 1505 aa20.59■□□□□ 0.89
EMP3-205ENST00000597057 WRNQ14191 1432 aaPredicted RBP eCLIP20.53■□□□□ 0.88
EMP3-205ENST00000597057 POLA1P09884 1462 aaPredicted RBP20.5■□□□□ 0.87
EMP3-205ENST00000597057 SYNJ1O43426 1573 aa20.48■□□□□ 0.87
EMP3-205ENST00000597057 FGD5Q6ZNL6 1462 aa20.48■□□□□ 0.87
EMP3-205ENST00000597057 TOP2BQ02880 1626 aa20.45■□□□□ 0.87
EMP3-205ENST00000597057 IFT140Q96RY7 1462 aa20.45■□□□□ 0.86
EMP3-205ENST00000597057 BIVM-ERCC5R4GMW8 1640 aa20.45■□□□□ 0.86
EMP3-205ENST00000597057 RAD54L2Q9Y4B4 1467 aa20.42■□□□□ 0.86
EMP3-205ENST00000597057 TARBP1Q13395 1621 aaKnown RBP20.42■□□□□ 0.86
EMP3-205ENST00000597057 SOGA1O94964 1423 aa20.41■□□□□ 0.86
EMP3-205ENST00000597057 ZNF608Q9ULD9 1512 aaPredicted RBP20.37■□□□□ 0.85
EMP3-205ENST00000597057 AQRO60306 1485 aaKnown RBP eCLIP20.29■□□□□ 0.84
EMP3-205ENST00000597057 ABCA10Q8WWZ4 1543 aa20.28■□□□□ 0.84
EMP3-205ENST00000597057 WDR97A6NE52 1622 aa20.28■□□□□ 0.84
EMP3-205ENST00000597057 TDRD9Q8NDG6 1382 aaKnown RBP20.28■□□□□ 0.84
EMP3-205ENST00000597057 EIF4G3O43432 1585 aaKnown RBP20.27■□□□□ 0.84
EMP3-205ENST00000597057 ABCA5Q8WWZ7 1642 aa20.18■□□□□ 0.82
EMP3-205ENST00000597057 GAPVD1Q14C86 1478 aa20.18■□□□□ 0.82
EMP3-205ENST00000597057 GRIN2BQ13224 1484 aa20.14■□□□□ 0.81
EMP3-205ENST00000597057 CHIC1Q5VXU3 224 aa20.14■□□□□ 0.81
EMP3-205ENST00000597057 PBRM1Q86U86 1689 aa20.09■□□□□ 0.81
EMP3-205ENST00000597057 SNAPC4Q5SXM2 1469 aa20.08■□□□□ 0.81
EMP3-205ENST00000597057 KIF27Q86VH2 1401 aa20.08■□□□□ 0.8
EMP3-205ENST00000597057 MAGI1Q96QZ7 1491 aaPredicted RBP20.05■□□□□ 0.8
EMP3-205ENST00000597057 ERICH3Q5RHP9 1530 aa20.03■□□□□ 0.8
EMP3-205ENST00000597057 RUSC2Q8N2Y8 1516 aa20.01■□□□□ 0.79
EMP3-205ENST00000597057 IGF1RP08069 1367 aa20■□□□□ 0.79
EMP3-205ENST00000597057 FBLN2P98095 1184 aa19.98■□□□□ 0.79
EMP3-205ENST00000597057 SYNJ2O15056 1496 aa19.98■□□□□ 0.79
EMP3-205ENST00000597057 ADAMTS12P58397 1594 aa19.96■□□□□ 0.79
EMP3-205ENST00000597057 CHD1O14646 1710 aa19.96■□□□□ 0.79
EMP3-205ENST00000597057 FHAD1B1AJZ9 1412 aa19.95■□□□□ 0.78
EMP3-205ENST00000597057 CHMP7Q8WUX9 453 aaPredicted RBP19.95■□□□□ 0.78
EMP3-205ENST00000597057 OSCARQ8IYS5 282 aa19.94■□□□□ 0.78
EMP3-205ENST00000597057 GRIN2AQ12879 1464 aa19.88■□□□□ 0.77
EMP3-205ENST00000597057 CUL7Q14999 1698 aa19.87■□□□□ 0.77
EMP3-205ENST00000597057 CARMIL1Q5VZK9 1371 aa19.87■□□□□ 0.77
EMP3-205ENST00000597057 EEA1Q15075 1411 aa19.83■□□□□ 0.76
EMP3-205ENST00000597057 RIMBP3CA6NJZ7 1639 aa19.83■□□□□ 0.76
EMP3-205ENST00000597057 RIMBP3BA6NNM3 1639 aa19.83■□□□□ 0.76
EMP3-205ENST00000597057 RIMBP3Q9UFD9 1639 aa19.83■□□□□ 0.76
EMP3-205ENST00000597057 FAM9AQ8IZU1 332 aaPredicted RBP19.8■□□□□ 0.76
EMP3-205ENST00000597057 CSRNP3Q8WYN3 585 aa19.8■□□□□ 0.76
EMP3-205ENST00000597057 NUP160Q12769 1436 aa19.79■□□□□ 0.76
EMP3-205ENST00000597057 CEP170Q5SW79 1584 aa19.78■□□□□ 0.76
EMP3-205ENST00000597057 CLASP1Q7Z460 1538 aa19.77■□□□□ 0.76
EMP3-205ENST00000597057 PRXQ9BXM0 1461 aa19.77■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms