RNA–Protein interactions for RNA: ENST00000596900.5

SPTBN4-210, Transcript of spectrin beta, non-erythrocytic 4, humanhuman

TSL 1 (best)

Gene SPTBN4, Length 1,857 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN4-210ENST00000596900 NISCHQ9Y2I1 1504 aa52.37■■■■■ 5.97
SPTBN4-210ENST00000596900 CCDC180Q9P1Z9 1646 aa45.85■■■■■ 4.93
SPTBN4-210ENST00000596900 ZCCHC6Q5VYS8 1495 aaKnown RBP43.98■■■■■ 4.63
SPTBN4-210ENST00000596900 DCAF1Q9Y4B6 1507 aa43.38■■■■■ 4.53
SPTBN4-210ENST00000596900 ABCC9O60706 1549 aa43.32■■■■■ 4.53
SPTBN4-210ENST00000596900 DCAF8L2P0C7V8 631 aa43.21■■■■■ 4.51
SPTBN4-210ENST00000596900 MYO15BQ96JP2 1530 aa42.94■■■■■ 4.46
SPTBN4-210ENST00000596900 NACADO15069 1562 aa42.71■■■■■ 4.43
SPTBN4-210ENST00000596900 SHROOM4Q9ULL8 1493 aa42.5■■■■■ 4.39
SPTBN4-210ENST00000596900 RB1CC1Q8TDY2 1594 aa42.38■■■■■ 4.37
SPTBN4-210ENST00000596900 SCRIBQ14160 1630 aa42.02■■■■■ 4.32
SPTBN4-210ENST00000596900 UNC13AQ9UPW8 1703 aa41.47■■■■■ 4.23
SPTBN4-210ENST00000596900 BICRAQ9NZM4 1560 aa40.99■■■■■ 4.15
SPTBN4-210ENST00000596900 SUPT5HO00267 1087 aaKnown RBP40.85■■■■■ 4.13
SPTBN4-210ENST00000596900 PABPN1Q86U42 306 aaKnown RBP eCLIP40.76■■■■■ 4.12
SPTBN4-210ENST00000596900 CECR2Q9BXF3 1484 aa40.62■■■■■ 4.09
SPTBN4-210ENST00000596900 RSF1Q96T23 1441 aaPredicted RBP40.53■■■■■ 4.08
SPTBN4-210ENST00000596900 BAZ1AQ9NRL2 1556 aaPredicted RBP40.52■■■■■ 4.08
SPTBN4-210ENST00000596900 MROH2BQ7Z745 1585 aa40.41■■■■■ 4.06
SPTBN4-210ENST00000596900 SMARCA4P51532 1647 aa40.31■■■■■ 4.04
SPTBN4-210ENST00000596900 WIZO95785 1651 aa40.09■■■■■ 4.01
SPTBN4-210ENST00000596900 PEG3Q9GZU2 1588 aa39.85■■■■□ 3.97
SPTBN4-210ENST00000596900 EIF4G1Q04637 1599 aaKnown RBP39.82■■■■□ 3.97
SPTBN4-210ENST00000596900 TOP2AP11388 1531 aaKnown RBP39.73■■■■□ 3.95
SPTBN4-210ENST00000596900 SMARCA2P51531 1590 aa39.71■■■■□ 3.95
SPTBN4-210ENST00000596900 ATAD2BQ9ULI0 1458 aa39.65■■■■□ 3.94
SPTBN4-210ENST00000596900 BAZ1BQ9UIG0 1483 aaKnown RBP39.46■■■■□ 3.91
SPTBN4-210ENST00000596900 NCAPD3P42695 1498 aa39.36■■■■□ 3.89
SPTBN4-210ENST00000596900 HMGXB3Q12766 1538 aa39.35■■■■□ 3.89
SPTBN4-210ENST00000596900 CC2D2AQ9P2K1 1620 aa39.25■■■■□ 3.87
SPTBN4-210ENST00000596900 CCDC88BA6NC98 1476 aa39.25■■■■□ 3.87
SPTBN4-210ENST00000596900 CHIC1Q5VXU3 224 aa39.03■■■■□ 3.84
SPTBN4-210ENST00000596900 TRIM41Q8WV44 630 aa38.49■■■■□ 3.75
SPTBN4-210ENST00000596900 CFTRP13569 1480 aa38.44■■■■□ 3.74
SPTBN4-210ENST00000596900 ABCC8Q09428 1581 aa38.37■■■■□ 3.73
SPTBN4-210ENST00000596900 PRDM2Q13029 1718 aa38.35■■■■□ 3.73
SPTBN4-210ENST00000596900 CADPSQ9ULU8 1353 aa38.32■■■■□ 3.73
SPTBN4-210ENST00000596900 WRNQ14191 1432 aaPredicted RBP eCLIP38.21■■■■□ 3.71
SPTBN4-210ENST00000596900 DNAJC5BQ9UF47 199 aa38.18■■■■□ 3.7
SPTBN4-210ENST00000596900 LAMC3Q9Y6N6 1575 aa38.11■■■■□ 3.69
SPTBN4-210ENST00000596900 SYNJ1O43426 1573 aa38.02■■■■□ 3.68
SPTBN4-210ENST00000596900 NESP48681 1621 aa37.96■■■■□ 3.67
SPTBN4-210ENST00000596900 TOP2BQ02880 1626 aa37.94■■■■□ 3.66
SPTBN4-210ENST00000596900 BIVM-ERCC5R4GMW8 1640 aa37.92■■■■□ 3.66
SPTBN4-210ENST00000596900 FANCD2Q9BXW9 1451 aa37.91■■■■□ 3.66
SPTBN4-210ENST00000596900 CUX1P39880 1505 aa37.81■■■■□ 3.64
SPTBN4-210ENST00000596900 PDS5BQ9NTI5 1447 aa37.8■■■■□ 3.64
SPTBN4-210ENST00000596900 CEP164Q9UPV0 1460 aa37.73■■■■□ 3.63
SPTBN4-210ENST00000596900 FAM9AQ8IZU1 332 aaPredicted RBP37.69■■■■□ 3.62
SPTBN4-210ENST00000596900 EEA1Q15075 1411 aa37.67■■■■□ 3.62
SPTBN4-210ENST00000596900 SOGA1O94964 1423 aa37.59■■■■□ 3.61
SPTBN4-210ENST00000596900 KIF21AQ7Z4S6 1674 aa37.59■■■■□ 3.61
SPTBN4-210ENST00000596900 DNMBPQ6XZF7 1577 aa37.59■■■■□ 3.61
SPTBN4-210ENST00000596900 TOPBP1Q92547 1522 aa37.48■■■■□ 3.59
SPTBN4-210ENST00000596900 LOC105371045A0A1W2PR82 267 aa37.45■■■■□ 3.59
SPTBN4-210ENST00000596900 FGD5Q6ZNL6 1462 aa37.44■■■■□ 3.58
SPTBN4-210ENST00000596900 RUSC2Q8N2Y8 1516 aa37.43■■■■□ 3.58
SPTBN4-210ENST00000596900 URB2Q14146 1524 aaKnown RBP37.4■■■■□ 3.58
SPTBN4-210ENST00000596900 CSRNP3Q8WYN3 585 aa37.36■■■■□ 3.57
SPTBN4-210ENST00000596900 MRC2Q9UBG0 1479 aa37.3■■■■□ 3.56
SPTBN4-210ENST00000596900 KIF27Q86VH2 1401 aa37.28■■■■□ 3.56
SPTBN4-210ENST00000596900 POLA1P09884 1462 aaPredicted RBP37.28■■■■□ 3.56
SPTBN4-210ENST00000596900 ERCC6Q03468 1493 aa37.24■■■■□ 3.55
SPTBN4-210ENST00000596900 CUX2O14529 1486 aa37.17■■■■□ 3.54
SPTBN4-210ENST00000596900 KIF21BO75037 1637 aa37.15■■■■□ 3.54
SPTBN4-210ENST00000596900 ABCA10Q8WWZ4 1543 aa37.14■■■■□ 3.54
SPTBN4-210ENST00000596900 WDR62O43379 1518 aa37.11■■■■□ 3.53
SPTBN4-210ENST00000596900 EHMT2Q96KQ7 1210 aa37.11■■■■□ 3.53
SPTBN4-210ENST00000596900 GOLGA3Q08378 1498 aa37.1■■■■□ 3.53
SPTBN4-210ENST00000596900 RAD54L2Q9Y4B4 1467 aa37.1■■■■□ 3.53
SPTBN4-210ENST00000596900 WDR97A6NE52 1622 aa37.04■■■■□ 3.52
SPTBN4-210ENST00000596900 THOC2Q8NI27 1593 aaKnown RBP37.01■■■■□ 3.52
SPTBN4-210ENST00000596900 PRXQ9BXM0 1461 aa36.95■■■■□ 3.51
SPTBN4-210ENST00000596900 ERICH3Q5RHP9 1530 aa36.94■■■■□ 3.5
SPTBN4-210ENST00000596900 TARBP1Q13395 1621 aaKnown RBP36.94■■■■□ 3.5
SPTBN4-210ENST00000596900 TNIKQ9UKE5 1360 aa36.91■■■■□ 3.5
SPTBN4-210ENST00000596900 UBTFP17480 764 aaKnown RBP36.88■■■■□ 3.49
SPTBN4-210ENST00000596900 IGF1RP08069 1367 aa36.87■■■■□ 3.49
SPTBN4-210ENST00000596900 RAPGEF2Q9Y4G8 1499 aa36.87■■■■□ 3.49
SPTBN4-210ENST00000596900 ABCA5Q8WWZ7 1642 aa36.86■■■■□ 3.49
SPTBN4-210ENST00000596900 IFT140Q96RY7 1462 aa36.83■■■■□ 3.49
SPTBN4-210ENST00000596900 GAPVD1Q14C86 1478 aa36.77■■■■□ 3.48
SPTBN4-210ENST00000596900 CUL7Q14999 1698 aa36.76■■■■□ 3.47
SPTBN4-210ENST00000596900 TDRD9Q8NDG6 1382 aaKnown RBP36.75■■■■□ 3.47
SPTBN4-210ENST00000596900 CARMIL1Q5VZK9 1371 aa36.73■■■■□ 3.47
SPTBN4-210ENST00000596900 CEP162Q5TB80 1403 aa36.69■■■■□ 3.46
SPTBN4-210ENST00000596900 PBRM1Q86U86 1689 aa36.62■■■■□ 3.45
SPTBN4-210ENST00000596900 AQRO60306 1485 aaKnown RBP eCLIP36.55■■■■□ 3.44
SPTBN4-210ENST00000596900 ZNF608Q9ULD9 1512 aaPredicted RBP36.53■■■■□ 3.44
SPTBN4-210ENST00000596900 GRIN2BQ13224 1484 aa36.53■■■■□ 3.44
SPTBN4-210ENST00000596900 EIF4G3O43432 1585 aaKnown RBP36.5■■■■□ 3.43
SPTBN4-210ENST00000596900 CLIP1P30622 1438 aa36.46■■■■□ 3.43
SPTBN4-210ENST00000596900 ADAMTS12P58397 1594 aa36.39■■■■□ 3.42
SPTBN4-210ENST00000596900 FHAD1B1AJZ9 1412 aa36.38■■■■□ 3.41
SPTBN4-210ENST00000596900 CTTNBP2Q8WZ74 1663 aa36.32■■■■□ 3.4
SPTBN4-210ENST00000596900 SNAPC4Q5SXM2 1469 aa36.26■■■■□ 3.4
SPTBN4-210ENST00000596900 MAGI1Q96QZ7 1491 aaPredicted RBP36.26■■■■□ 3.39
SPTBN4-210ENST00000596900 RANGAP1P46060 587 aaPredicted RBP36.23■■■■□ 3.39
SPTBN4-210ENST00000596900 VPS8Q8N3P4 1428 aa36.13■■■■□ 3.38
SPTBN4-210ENST00000596900 ARHGAP35Q9NRY4 1499 aa36.11■■■■□ 3.37
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms