RNA–Protein interactions for RNA: ENST00000596606.1

CEACAM5-207, Transcript of carcinoembryonic antigen related cell adhesion molecule 5, humanhuman

TSL 1 (best)

Gene CEACAM5, Length 1,430 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM5-207ENST00000596606 NISCHQ9Y2I1 1504 aa16.46■□□□□ 0.23
CEACAM5-207ENST00000596606 AEBP2Q6ZN18 517 aaPredicted RBP16.29■□□□□ 0.2
CEACAM5-207ENST00000596606 CHIC1Q5VXU3 224 aa15.34■□□□□ 0.05
CEACAM5-207ENST00000596606 CCDC180Q9P1Z9 1646 aa14.68□□□□□ -0.06
CEACAM5-207ENST00000596606 ABCC9O60706 1549 aa14.07□□□□□ -0.16
CEACAM5-207ENST00000596606 SENP3Q9H4L4 574 aaPredicted RBP14.06□□□□□ -0.16
CEACAM5-207ENST00000596606 POTEDQ86YR6 584 aa13.99□□□□□ -0.17
CEACAM5-207ENST00000596606 ZCCHC6Q5VYS8 1495 aaKnown RBP13.76□□□□□ -0.21
CEACAM5-207ENST00000596606 PHF23Q9BUL5 403 aaPredicted RBP13.72□□□□□ -0.21
CEACAM5-207ENST00000596606 NACADO15069 1562 aa13.71□□□□□ -0.21
CEACAM5-207ENST00000596606 RB1CC1Q8TDY2 1594 aa13.7□□□□□ -0.22
CEACAM5-207ENST00000596606 MYO15BQ96JP2 1530 aa13.68□□□□□ -0.22
CEACAM5-207ENST00000596606 DCAF1Q9Y4B6 1507 aa13.67□□□□□ -0.22
CEACAM5-207ENST00000596606 DCAF8L2P0C7V8 631 aa13.58□□□□□ -0.24
CEACAM5-207ENST00000596606 UNC13AQ9UPW8 1703 aa13.43□□□□□ -0.26
CEACAM5-207ENST00000596606 SCRIBQ14160 1630 aa13.32□□□□□ -0.28
CEACAM5-207ENST00000596606 BICRAQ9NZM4 1560 aa13.22□□□□□ -0.29
CEACAM5-207ENST00000596606 FOXD1Q16676 465 aa13.2□□□□□ -0.3
CEACAM5-207ENST00000596606 SHROOM4Q9ULL8 1493 aa13.19□□□□□ -0.3
CEACAM5-207ENST00000596606 PABPN1Q86U42 306 aaKnown RBP eCLIP13.1□□□□□ -0.31
CEACAM5-207ENST00000596606 EIF4G1Q04637 1599 aaKnown RBP12.89□□□□□ -0.35
CEACAM5-207ENST00000596606 CC2D2AQ9P2K1 1620 aa12.8□□□□□ -0.36
CEACAM5-207ENST00000596606 BAZ1AQ9NRL2 1556 aaPredicted RBP12.78□□□□□ -0.36
CEACAM5-207ENST00000596606 SMARCA4P51532 1647 aa12.78□□□□□ -0.36
CEACAM5-207ENST00000596606 MSH5O43196 834 aa12.74□□□□□ -0.37
CEACAM5-207ENST00000596606 CECR2Q9BXF3 1484 aa12.74□□□□□ -0.37
CEACAM5-207ENST00000596606 SMARCA2P51531 1590 aa12.68□□□□□ -0.38
CEACAM5-207ENST00000596606 DNAJC5BQ9UF47 199 aa12.67□□□□□ -0.38
CEACAM5-207ENST00000596606 PEG3Q9GZU2 1588 aa12.66□□□□□ -0.38
CEACAM5-207ENST00000596606 MROH2BQ7Z745 1585 aa12.65□□□□□ -0.38
CEACAM5-207ENST00000596606 PLPPR3Q6T4P5 718 aa12.65□□□□□ -0.38
CEACAM5-207ENST00000596606 ATAD2BQ9ULI0 1458 aa12.61□□□□□ -0.39
CEACAM5-207ENST00000596606 HMGXB3Q12766 1538 aa12.61□□□□□ -0.39
CEACAM5-207ENST00000596606 NCAPD3P42695 1498 aa12.59□□□□□ -0.39
CEACAM5-207ENST00000596606 WIZO95785 1651 aa12.57□□□□□ -0.4
CEACAM5-207ENST00000596606 BAZ1BQ9UIG0 1483 aaKnown RBP12.55□□□□□ -0.4
CEACAM5-207ENST00000596606 RSF1Q96T23 1441 aaPredicted RBP12.54□□□□□ -0.4
CEACAM5-207ENST00000596606 TOP2AP11388 1531 aaKnown RBP12.46□□□□□ -0.42
CEACAM5-207ENST00000596606 LAMC3Q9Y6N6 1575 aa12.31□□□□□ -0.44
CEACAM5-207ENST00000596606 SUPT5HO00267 1087 aaKnown RBP12.28□□□□□ -0.44
CEACAM5-207ENST00000596606 PRDM2Q13029 1718 aa12.28□□□□□ -0.44
CEACAM5-207ENST00000596606 CCDC88BA6NC98 1476 aa12.24□□□□□ -0.45
CEACAM5-207ENST00000596606 CADPSQ9ULU8 1353 aa12.21□□□□□ -0.45
CEACAM5-207ENST00000596606 NESP48681 1621 aa12.21□□□□□ -0.46
CEACAM5-207ENST00000596606 CFTRP13569 1480 aa12.2□□□□□ -0.46
CEACAM5-207ENST00000596606 KIF21AQ7Z4S6 1674 aa12.18□□□□□ -0.46
CEACAM5-207ENST00000596606 PDS5BQ9NTI5 1447 aa12.17□□□□□ -0.46
CEACAM5-207ENST00000596606 ERCC6Q03468 1493 aa12.17□□□□□ -0.46
CEACAM5-207ENST00000596606 FANCD2Q9BXW9 1451 aa12.1□□□□□ -0.47
CEACAM5-207ENST00000596606 CEP164Q9UPV0 1460 aa12.1□□□□□ -0.47
CEACAM5-207ENST00000596606 THOC2Q8NI27 1593 aaKnown RBP12.08□□□□□ -0.48
CEACAM5-207ENST00000596606 PIAS4Q8N2W9 510 aaPredicted RBP12.04□□□□□ -0.48
CEACAM5-207ENST00000596606 MRC2Q9UBG0 1479 aa12.03□□□□□ -0.48
CEACAM5-207ENST00000596606 WDR62O43379 1518 aa12.02□□□□□ -0.49
CEACAM5-207ENST00000596606 CUX2O14529 1486 aa12□□□□□ -0.49
CEACAM5-207ENST00000596606 ABCC8Q09428 1581 aa11.97□□□□□ -0.49
CEACAM5-207ENST00000596606 ADRA2BP18089 450 aa11.97□□□□□ -0.49
CEACAM5-207ENST00000596606 DNMBPQ6XZF7 1577 aa11.97□□□□□ -0.49
CEACAM5-207ENST00000596606 URB2Q14146 1524 aaKnown RBP11.95□□□□□ -0.5
CEACAM5-207ENST00000596606 TOPBP1Q92547 1522 aa11.93□□□□□ -0.5
CEACAM5-207ENST00000596606 PPP6R1Q9UPN7 881 aa11.89□□□□□ -0.51
CEACAM5-207ENST00000596606 BIVM-ERCC5R4GMW8 1640 aa11.89□□□□□ -0.51
CEACAM5-207ENST00000596606 CUX1P39880 1505 aa11.88□□□□□ -0.51
CEACAM5-207ENST00000596606 TOP2BQ02880 1626 aa11.86□□□□□ -0.51
CEACAM5-207ENST00000596606 WRNQ14191 1432 aaPredicted RBP eCLIP11.86□□□□□ -0.51
CEACAM5-207ENST00000596606 SYNJ1O43426 1573 aa11.84□□□□□ -0.51
CEACAM5-207ENST00000596606 POLA1P09884 1462 aaPredicted RBP11.83□□□□□ -0.52
CEACAM5-207ENST00000596606 FGD5Q6ZNL6 1462 aa11.83□□□□□ -0.52
CEACAM5-207ENST00000596606 IFT140Q96RY7 1462 aa11.83□□□□□ -0.52
CEACAM5-207ENST00000596606 TARBP1Q13395 1621 aaKnown RBP11.81□□□□□ -0.52
CEACAM5-207ENST00000596606 WDR97A6NE52 1622 aa11.8□□□□□ -0.52
CEACAM5-207ENST00000596606 EIF4G3O43432 1585 aaKnown RBP11.76□□□□□ -0.53
CEACAM5-207ENST00000596606 SOGA1O94964 1423 aa11.75□□□□□ -0.53
CEACAM5-207ENST00000596606 RAD54L2Q9Y4B4 1467 aa11.73□□□□□ -0.53
CEACAM5-207ENST00000596606 ABCA10Q8WWZ4 1543 aa11.73□□□□□ -0.53
CEACAM5-207ENST00000596606 ZNF608Q9ULD9 1512 aaPredicted RBP11.71□□□□□ -0.53
CEACAM5-207ENST00000596606 ABCA5Q8WWZ7 1642 aa11.71□□□□□ -0.53
CEACAM5-207ENST00000596606 PBRM1Q86U86 1689 aa11.71□□□□□ -0.54
CEACAM5-207ENST00000596606 GAPVD1Q14C86 1478 aa11.66□□□□□ -0.54
CEACAM5-207ENST00000596606 AQRO60306 1485 aaKnown RBP eCLIP11.65□□□□□ -0.54
CEACAM5-207ENST00000596606 TDRD9Q8NDG6 1382 aaKnown RBP11.64□□□□□ -0.55
CEACAM5-207ENST00000596606 GRIN2BQ13224 1484 aa11.63□□□□□ -0.55
CEACAM5-207ENST00000596606 TRIM41Q8WV44 630 aa11.63□□□□□ -0.55
CEACAM5-207ENST00000596606 ERICH3Q5RHP9 1530 aa11.62□□□□□ -0.55
CEACAM5-207ENST00000596606 MAGI1Q96QZ7 1491 aaPredicted RBP11.62□□□□□ -0.55
CEACAM5-207ENST00000596606 KIF27Q86VH2 1401 aa11.61□□□□□ -0.55
CEACAM5-207ENST00000596606 CHD1O14646 1710 aa11.61□□□□□ -0.55
CEACAM5-207ENST00000596606 SNAPC4Q5SXM2 1469 aa11.59□□□□□ -0.55
CEACAM5-207ENST00000596606 KCNA4P22459 653 aa11.59□□□□□ -0.55
CEACAM5-207ENST00000596606 CUL7Q14999 1698 aa11.59□□□□□ -0.55
CEACAM5-207ENST00000596606 ADAMTS12P58397 1594 aa11.58□□□□□ -0.56
CEACAM5-207ENST00000596606 SYNJ2O15056 1496 aa11.55□□□□□ -0.56
CEACAM5-207ENST00000596606 FHAD1B1AJZ9 1412 aa11.52□□□□□ -0.57
CEACAM5-207ENST00000596606 EEA1Q15075 1411 aa11.51□□□□□ -0.57
CEACAM5-207ENST00000596606 GRIN2AQ12879 1464 aa11.49□□□□□ -0.57
CEACAM5-207ENST00000596606 CHMP7Q8WUX9 453 aaPredicted RBP11.48□□□□□ -0.57
CEACAM5-207ENST00000596606 IGF1RP08069 1367 aa11.47□□□□□ -0.57
CEACAM5-207ENST00000596606 FBLN2P98095 1184 aa11.47□□□□□ -0.57
CEACAM5-207ENST00000596606 RUSC2Q8N2Y8 1516 aa11.47□□□□□ -0.57
CEACAM5-207ENST00000596606 HRCP23327 699 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms