RNA–Protein interactions for RNA: ENST00000596365.5

LINC00649-208, long intergenic non-protein coding RNA 649, humanhuman

TSL 5

Gene LINC00649, Length 682 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00649-208ENST00000596365 AEBP2Q6ZN18 517 aaPredicted RBP24.46■■□□□ 1.51
LINC00649-208ENST00000596365 CHIC1Q5VXU3 224 aa23.59■■□□□ 1.37
LINC00649-208ENST00000596365 NISCHQ9Y2I1 1504 aa21.95■■□□□ 1.1
LINC00649-208ENST00000596365 SENP3Q9H4L4 574 aaPredicted RBP20.78■□□□□ 0.92
LINC00649-208ENST00000596365 PHF23Q9BUL5 403 aaPredicted RBP20.73■□□□□ 0.91
LINC00649-208ENST00000596365 ABCC9O60706 1549 aa20.44■□□□□ 0.86
LINC00649-208ENST00000596365 CCDC180Q9P1Z9 1646 aa20■□□□□ 0.79
LINC00649-208ENST00000596365 DNAJC5BQ9UF47 199 aa19.62■□□□□ 0.73
LINC00649-208ENST00000596365 FOXD1Q16676 465 aa19.34■□□□□ 0.69
LINC00649-208ENST00000596365 RB1CC1Q8TDY2 1594 aa19.28■□□□□ 0.68
LINC00649-208ENST00000596365 PLPPR3Q6T4P5 718 aa19.02■□□□□ 0.64
LINC00649-208ENST00000596365 NACADO15069 1562 aa19.01■□□□□ 0.63
LINC00649-208ENST00000596365 PABPN1Q86U42 306 aaKnown RBP eCLIP18.92■□□□□ 0.62
LINC00649-208ENST00000596365 UNC13AQ9UPW8 1703 aa18.88■□□□□ 0.61
LINC00649-208ENST00000596365 DCAF8L2P0C7V8 631 aa18.73■□□□□ 0.59
LINC00649-208ENST00000596365 BICRAQ9NZM4 1560 aa18.71■□□□□ 0.59
LINC00649-208ENST00000596365 MYO15BQ96JP2 1530 aa18.56■□□□□ 0.56
LINC00649-208ENST00000596365 CECR2Q9BXF3 1484 aa18.49■□□□□ 0.55
LINC00649-208ENST00000596365 CC2D2AQ9P2K1 1620 aa18.48■□□□□ 0.55
LINC00649-208ENST00000596365 DNAJC5Q9H3Z4 198 aa18.46■□□□□ 0.55
LINC00649-208ENST00000596365 SHROOM4Q9ULL8 1493 aa18.44■□□□□ 0.54
LINC00649-208ENST00000596365 PPP6R1Q9UPN7 881 aa18.4■□□□□ 0.54
LINC00649-208ENST00000596365 ADRA2BP18089 450 aa18.36■□□□□ 0.53
LINC00649-208ENST00000596365 EIF4G1Q04637 1599 aaKnown RBP18.3■□□□□ 0.52
LINC00649-208ENST00000596365 PIAS4Q8N2W9 510 aaPredicted RBP18.15■□□□□ 0.5
LINC00649-208ENST00000596365 SCRIBQ14160 1630 aa18.13■□□□□ 0.49
LINC00649-208ENST00000596365 DCAF1Q9Y4B6 1507 aa18.12■□□□□ 0.49
LINC00649-208ENST00000596365 ZCCHC6Q5VYS8 1495 aaKnown RBP18.07■□□□□ 0.48
LINC00649-208ENST00000596365 MSH5O43196 834 aa17.93■□□□□ 0.46
LINC00649-208ENST00000596365 CUX2O14529 1486 aa17.89■□□□□ 0.45
LINC00649-208ENST00000596365 ERCC6Q03468 1493 aa17.72■□□□□ 0.43
LINC00649-208ENST00000596365 NCAPD3P42695 1498 aa17.52■□□□□ 0.4
LINC00649-208ENST00000596365 TRIM41Q8WV44 630 aa17.41■□□□□ 0.38
LINC00649-208ENST00000596365 NESP48681 1621 aa17.4■□□□□ 0.38
LINC00649-208ENST00000596365 ATAD2BQ9ULI0 1458 aa17.38■□□□□ 0.37
LINC00649-208ENST00000596365 THOC2Q8NI27 1593 aaKnown RBP17.38■□□□□ 0.37
LINC00649-208ENST00000596365 HMGXB3Q12766 1538 aa17.37■□□□□ 0.37
LINC00649-208ENST00000596365 SMARCA2P51531 1590 aa17.35■□□□□ 0.37
LINC00649-208ENST00000596365 SMARCA4P51532 1647 aa17.26■□□□□ 0.35
LINC00649-208ENST00000596365 LAMC3Q9Y6N6 1575 aa17.25■□□□□ 0.35
LINC00649-208ENST00000596365 KIF21AQ7Z4S6 1674 aa17.23■□□□□ 0.35
LINC00649-208ENST00000596365 BAZ1BQ9UIG0 1483 aaKnown RBP17.2■□□□□ 0.34
LINC00649-208ENST00000596365 PDS5BQ9NTI5 1447 aa17.15■□□□□ 0.34
LINC00649-208ENST00000596365 PEG3Q9GZU2 1588 aa17.1■□□□□ 0.33
LINC00649-208ENST00000596365 BAZ1AQ9NRL2 1556 aaPredicted RBP17.09■□□□□ 0.33
LINC00649-208ENST00000596365 MRC2Q9UBG0 1479 aa17.03■□□□□ 0.32
LINC00649-208ENST00000596365 WDR62O43379 1518 aa17.01■□□□□ 0.31
LINC00649-208ENST00000596365 OSCARQ8IYS5 282 aa16.96■□□□□ 0.31
LINC00649-208ENST00000596365 CADPSQ9ULU8 1353 aa16.95■□□□□ 0.3
LINC00649-208ENST00000596365 MROH2BQ7Z745 1585 aa16.89■□□□□ 0.29
LINC00649-208ENST00000596365 POTEDQ86YR6 584 aa16.86■□□□□ 0.29
LINC00649-208ENST00000596365 CEP164Q9UPV0 1460 aa16.86■□□□□ 0.29
LINC00649-208ENST00000596365 RIMBP3CA6NJZ7 1639 aa16.82■□□□□ 0.28
LINC00649-208ENST00000596365 RIMBP3BA6NNM3 1639 aa16.82■□□□□ 0.28
LINC00649-208ENST00000596365 RIMBP3Q9UFD9 1639 aa16.82■□□□□ 0.28
LINC00649-208ENST00000596365 SCAF1Q9H7N4 1312 aaKnown RBP16.78■□□□□ 0.28
LINC00649-208ENST00000596365 FANCD2Q9BXW9 1451 aa16.77■□□□□ 0.28
LINC00649-208ENST00000596365 MAPK8IP2Q13387 824 aaPredicted RBP16.76■□□□□ 0.27
LINC00649-208ENST00000596365 PPP4R3CPQ6ZMV5 832 aa16.74■□□□□ 0.27
LINC00649-208ENST00000596365 ARHGEF11O15085 1522 aa16.69■□□□□ 0.26
LINC00649-208ENST00000596365 WIZO95785 1651 aa16.69■□□□□ 0.26
LINC00649-208ENST00000596365 URB2Q14146 1524 aaKnown RBP16.66■□□□□ 0.26
LINC00649-208ENST00000596365 CFTRP13569 1480 aa16.65■□□□□ 0.26
LINC00649-208ENST00000596365 TRHP20396 242 aaPredicted RBP16.58■□□□□ 0.24
LINC00649-208ENST00000596365 CYB5RLQ6IPT4 315 aa16.58■□□□□ 0.24
LINC00649-208ENST00000596365 DMRT2Q9Y5R5 561 aa16.55■□□□□ 0.24
LINC00649-208ENST00000596365 PRDM2Q13029 1718 aa16.55■□□□□ 0.24
LINC00649-208ENST00000596365 IFT140Q96RY7 1462 aa16.54■□□□□ 0.24
LINC00649-208ENST00000596365 ZNF608Q9ULD9 1512 aaPredicted RBP16.53■□□□□ 0.24
LINC00649-208ENST00000596365 ARAP1Q96P48 1450 aa16.48■□□□□ 0.23
LINC00649-208ENST00000596365 CHD1O14646 1710 aa16.47■□□□□ 0.23
LINC00649-208ENST00000596365 EIF4G3O43432 1585 aaKnown RBP16.46■□□□□ 0.23
LINC00649-208ENST00000596365 TOP2AP11388 1531 aaKnown RBP16.44■□□□□ 0.22
LINC00649-208ENST00000596365 RSF1Q96T23 1441 aaPredicted RBP16.41■□□□□ 0.22
LINC00649-208ENST00000596365 TOPBP1Q92547 1522 aa16.4■□□□□ 0.22
LINC00649-208ENST00000596365 ABCC8Q09428 1581 aa16.37■□□□□ 0.21
LINC00649-208ENST00000596365 FBLN2P98095 1184 aa16.32■□□□□ 0.2
LINC00649-208ENST00000596365 CNKSR2Q8WXI2 1034 aa16.32■□□□□ 0.2
LINC00649-208ENST00000596365 TARBP1Q13395 1621 aaKnown RBP16.31■□□□□ 0.2
LINC00649-208ENST00000596365 DNMBPQ6XZF7 1577 aa16.31■□□□□ 0.2
LINC00649-208ENST00000596365 AQRO60306 1485 aaKnown RBP eCLIP16.31■□□□□ 0.2
LINC00649-208ENST00000596365 CCDC88BA6NC98 1476 aa16.23■□□□□ 0.19
LINC00649-208ENST00000596365 CLASP1Q7Z460 1538 aa16.23■□□□□ 0.19
LINC00649-208ENST00000596365 NCBP3Q53F19 620 aaKnown RBP16.2■□□□□ 0.18
LINC00649-208ENST00000596365 SYNJ1O43426 1573 aa16.19■□□□□ 0.18
LINC00649-208ENST00000596365 POLA1P09884 1462 aaPredicted RBP16.18■□□□□ 0.18
LINC00649-208ENST00000596365 WDR97A6NE52 1622 aa16.15■□□□□ 0.18
LINC00649-208ENST00000596365 SNAPC4Q5SXM2 1469 aa16.15■□□□□ 0.18
LINC00649-208ENST00000596365 CHMP7Q8WUX9 453 aaPredicted RBP16.13■□□□□ 0.17
LINC00649-208ENST00000596365 TDRD9Q8NDG6 1382 aaKnown RBP16.13■□□□□ 0.17
LINC00649-208ENST00000596365 RAD54L2Q9Y4B4 1467 aa16.12■□□□□ 0.17
LINC00649-208ENST00000596365 SOGA1O94964 1423 aa16.11■□□□□ 0.17
LINC00649-208ENST00000596365 MAGI1Q96QZ7 1491 aaPredicted RBP16.1■□□□□ 0.17
LINC00649-208ENST00000596365 HOXD11P31277 338 aaPredicted RBP16.09■□□□□ 0.17
LINC00649-208ENST00000596365 GAPVD1Q14C86 1478 aa16.09■□□□□ 0.17
LINC00649-208ENST00000596365 RNF216Q9NWF9 866 aaPredicted RBP16.07■□□□□ 0.16
LINC00649-208ENST00000596365 SYNJ2O15056 1496 aa16.05■□□□□ 0.16
LINC00649-208ENST00000596365 GRIN2BQ13224 1484 aa16.04■□□□□ 0.16
LINC00649-208ENST00000596365 KCNA4P22459 653 aa16.03■□□□□ 0.16
LINC00649-208ENST00000596365 FGD5Q6ZNL6 1462 aa16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms