RNA–Protein interactions for RNA: ENST00000596248.1

ZNF552-203, Transcript of zinc finger protein 552, humanhuman

TSL 2

Gene ZNF552, Length 1,703 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF552-203ENST00000596248 NISCHQ9Y2I1 1504 aa35.74■■■■□ 3.31
ZNF552-203ENST00000596248 CCDC180Q9P1Z9 1646 aa31.33■■■□□ 2.61
ZNF552-203ENST00000596248 ZCCHC6Q5VYS8 1495 aaKnown RBP29.99■■■□□ 2.39
ZNF552-203ENST00000596248 ABCC9O60706 1549 aa29.75■■■□□ 2.35
ZNF552-203ENST00000596248 DCAF1Q9Y4B6 1507 aa29.53■■■□□ 2.32
ZNF552-203ENST00000596248 DCAF8L2P0C7V8 631 aa29.51■■■□□ 2.32
ZNF552-203ENST00000596248 MYO15BQ96JP2 1530 aa29.24■■■□□ 2.27
ZNF552-203ENST00000596248 NACADO15069 1562 aa29.16■■■□□ 2.26
ZNF552-203ENST00000596248 SHROOM4Q9ULL8 1493 aa29■■■□□ 2.23
ZNF552-203ENST00000596248 RB1CC1Q8TDY2 1594 aa28.98■■■□□ 2.23
ZNF552-203ENST00000596248 SCRIBQ14160 1630 aa28.78■■■□□ 2.2
ZNF552-203ENST00000596248 UNC13AQ9UPW8 1703 aa28.57■■■□□ 2.16
ZNF552-203ENST00000596248 BICRAQ9NZM4 1560 aa28.15■■■□□ 2.1
ZNF552-203ENST00000596248 PABPN1Q86U42 306 aaKnown RBP eCLIP27.98■■■□□ 2.07
ZNF552-203ENST00000596248 CECR2Q9BXF3 1484 aa27.8■■■□□ 2.04
ZNF552-203ENST00000596248 SUPT5HO00267 1087 aaKnown RBP27.75■■■□□ 2.03
ZNF552-203ENST00000596248 MROH2BQ7Z745 1585 aa27.63■■■□□ 2.01
ZNF552-203ENST00000596248 RSF1Q96T23 1441 aaPredicted RBP27.62■■■□□ 2.01
ZNF552-203ENST00000596248 BAZ1AQ9NRL2 1556 aaPredicted RBP27.61■■■□□ 2.01
ZNF552-203ENST00000596248 SMARCA4P51532 1647 aa27.57■■■□□ 2
ZNF552-203ENST00000596248 WIZO95785 1651 aa27.45■■□□□ 1.98
ZNF552-203ENST00000596248 EIF4G1Q04637 1599 aaKnown RBP27.3■■□□□ 1.96
ZNF552-203ENST00000596248 PEG3Q9GZU2 1588 aa27.21■■□□□ 1.95
ZNF552-203ENST00000596248 ATAD2BQ9ULI0 1458 aa27.1■■□□□ 1.93
ZNF552-203ENST00000596248 SMARCA2P51531 1590 aa27.09■■□□□ 1.93
ZNF552-203ENST00000596248 TOP2AP11388 1531 aaKnown RBP27.09■■□□□ 1.93
ZNF552-203ENST00000596248 CC2D2AQ9P2K1 1620 aa26.97■■□□□ 1.91
ZNF552-203ENST00000596248 BAZ1BQ9UIG0 1483 aaKnown RBP26.94■■□□□ 1.9
ZNF552-203ENST00000596248 NCAPD3P42695 1498 aa26.88■■□□□ 1.89
ZNF552-203ENST00000596248 HMGXB3Q12766 1538 aa26.88■■□□□ 1.89
ZNF552-203ENST00000596248 CCDC88BA6NC98 1476 aa26.79■■□□□ 1.88
ZNF552-203ENST00000596248 CHIC1Q5VXU3 224 aa26.45■■□□□ 1.82
ZNF552-203ENST00000596248 DNAJC5BQ9UF47 199 aa26.4■■□□□ 1.82
ZNF552-203ENST00000596248 PRDM2Q13029 1718 aa26.28■■□□□ 1.8
ZNF552-203ENST00000596248 CFTRP13569 1480 aa26.24■■□□□ 1.79
ZNF552-203ENST00000596248 ABCC8Q09428 1581 aa26.23■■□□□ 1.79
ZNF552-203ENST00000596248 CADPSQ9ULU8 1353 aa26.16■■□□□ 1.78
ZNF552-203ENST00000596248 NESP48681 1621 aa26.09■■□□□ 1.77
ZNF552-203ENST00000596248 TRIM41Q8WV44 630 aa26.08■■□□□ 1.77
ZNF552-203ENST00000596248 LAMC3Q9Y6N6 1575 aa26.06■■□□□ 1.76
ZNF552-203ENST00000596248 WRNQ14191 1432 aaPredicted RBP eCLIP26■■□□□ 1.75
ZNF552-203ENST00000596248 SYNJ1O43426 1573 aa25.98■■□□□ 1.75
ZNF552-203ENST00000596248 FANCD2Q9BXW9 1451 aa25.91■■□□□ 1.74
ZNF552-203ENST00000596248 BIVM-ERCC5R4GMW8 1640 aa25.88■■□□□ 1.73
ZNF552-203ENST00000596248 TOP2BQ02880 1626 aa25.87■■□□□ 1.73
ZNF552-203ENST00000596248 KIF21AQ7Z4S6 1674 aa25.86■■□□□ 1.73
ZNF552-203ENST00000596248 CUX1P39880 1505 aa25.85■■□□□ 1.73
ZNF552-203ENST00000596248 PDS5BQ9NTI5 1447 aa25.79■■□□□ 1.72
ZNF552-203ENST00000596248 CEP164Q9UPV0 1460 aa25.78■■□□□ 1.72
ZNF552-203ENST00000596248 DNMBPQ6XZF7 1577 aa25.67■■□□□ 1.7
ZNF552-203ENST00000596248 FAM9AQ8IZU1 332 aaPredicted RBP25.64■■□□□ 1.7
ZNF552-203ENST00000596248 URB2Q14146 1524 aaKnown RBP25.63■■□□□ 1.69
ZNF552-203ENST00000596248 TOPBP1Q92547 1522 aa25.63■■□□□ 1.69
ZNF552-203ENST00000596248 SOGA1O94964 1423 aa25.62■■□□□ 1.69
ZNF552-203ENST00000596248 FGD5Q6ZNL6 1462 aa25.58■■□□□ 1.69
ZNF552-203ENST00000596248 RUSC2Q8N2Y8 1516 aa25.58■■□□□ 1.69
ZNF552-203ENST00000596248 MRC2Q9UBG0 1479 aa25.51■■□□□ 1.67
ZNF552-203ENST00000596248 ERCC6Q03468 1493 aa25.51■■□□□ 1.67
ZNF552-203ENST00000596248 POLA1P09884 1462 aaPredicted RBP25.49■■□□□ 1.67
ZNF552-203ENST00000596248 EEA1Q15075 1411 aa25.48■■□□□ 1.67
ZNF552-203ENST00000596248 LOC105371045A0A1W2PR82 267 aa25.45■■□□□ 1.66
ZNF552-203ENST00000596248 THOC2Q8NI27 1593 aaKnown RBP25.45■■□□□ 1.66
ZNF552-203ENST00000596248 WDR62O43379 1518 aa25.42■■□□□ 1.66
ZNF552-203ENST00000596248 RAD54L2Q9Y4B4 1467 aa25.4■■□□□ 1.66
ZNF552-203ENST00000596248 WDR97A6NE52 1622 aa25.39■■□□□ 1.65
ZNF552-203ENST00000596248 CUX2O14529 1486 aa25.35■■□□□ 1.65
ZNF552-203ENST00000596248 CSRNP3Q8WYN3 585 aa25.34■■□□□ 1.65
ZNF552-203ENST00000596248 KIF27Q86VH2 1401 aa25.34■■□□□ 1.65
ZNF552-203ENST00000596248 ABCA10Q8WWZ4 1543 aa25.33■■□□□ 1.65
ZNF552-203ENST00000596248 TARBP1Q13395 1621 aaKnown RBP25.31■■□□□ 1.64
ZNF552-203ENST00000596248 EHMT2Q96KQ7 1210 aa25.31■■□□□ 1.64
ZNF552-203ENST00000596248 KIF21BO75037 1637 aa25.26■■□□□ 1.63
ZNF552-203ENST00000596248 ABCA5Q8WWZ7 1642 aa25.21■■□□□ 1.63
ZNF552-203ENST00000596248 GOLGA3Q08378 1498 aa25.16■■□□□ 1.62
ZNF552-203ENST00000596248 IFT140Q96RY7 1462 aa25.15■■□□□ 1.62
ZNF552-203ENST00000596248 PRXQ9BXM0 1461 aa25.14■■□□□ 1.62
ZNF552-203ENST00000596248 TDRD9Q8NDG6 1382 aaKnown RBP25.14■■□□□ 1.61
ZNF552-203ENST00000596248 IGF1RP08069 1367 aa25.13■■□□□ 1.61
ZNF552-203ENST00000596248 RAPGEF2Q9Y4G8 1499 aa25.12■■□□□ 1.61
ZNF552-203ENST00000596248 PBRM1Q86U86 1689 aa25.11■■□□□ 1.61
ZNF552-203ENST00000596248 GAPVD1Q14C86 1478 aa25.1■■□□□ 1.61
ZNF552-203ENST00000596248 ERICH3Q5RHP9 1530 aa25.1■■□□□ 1.61
ZNF552-203ENST00000596248 ZNF608Q9ULD9 1512 aaPredicted RBP25.06■■□□□ 1.6
ZNF552-203ENST00000596248 CUL7Q14999 1698 aa25.05■■□□□ 1.6
ZNF552-203ENST00000596248 AQRO60306 1485 aaKnown RBP eCLIP25.03■■□□□ 1.6
ZNF552-203ENST00000596248 EIF4G3O43432 1585 aaKnown RBP25.03■■□□□ 1.6
ZNF552-203ENST00000596248 UBTFP17480 764 aaKnown RBP25.01■■□□□ 1.59
ZNF552-203ENST00000596248 CARMIL1Q5VZK9 1371 aa25■■□□□ 1.59
ZNF552-203ENST00000596248 TNIKQ9UKE5 1360 aa25■■□□□ 1.59
ZNF552-203ENST00000596248 GRIN2BQ13224 1484 aa24.92■■□□□ 1.58
ZNF552-203ENST00000596248 CEP162Q5TB80 1403 aa24.9■■□□□ 1.58
ZNF552-203ENST00000596248 ADAMTS12P58397 1594 aa24.89■■□□□ 1.58
ZNF552-203ENST00000596248 CTTNBP2Q8WZ74 1663 aa24.82■■□□□ 1.56
ZNF552-203ENST00000596248 SNAPC4Q5SXM2 1469 aa24.82■■□□□ 1.56
ZNF552-203ENST00000596248 FHAD1B1AJZ9 1412 aa24.8■■□□□ 1.56
ZNF552-203ENST00000596248 MAGI1Q96QZ7 1491 aaPredicted RBP24.75■■□□□ 1.55
ZNF552-203ENST00000596248 CLIP1P30622 1438 aa24.74■■□□□ 1.55
ZNF552-203ENST00000596248 RANGAP1P46060 587 aaPredicted RBP24.71■■□□□ 1.55
ZNF552-203ENST00000596248 SYNJ2O15056 1496 aa24.65■■□□□ 1.54
ZNF552-203ENST00000596248 GRIN2AQ12879 1464 aa24.64■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms