RNA–Protein interactions for RNA: ENST00000596203.1

LINC00664-201, long intergenic non-protein coding RNA 664, humanhuman

TSL 1 (best) BASIC

Gene LINC00664, Length 1,742 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00664-201ENST00000596203 NISCHQ9Y2I1 1504 aa29.2■■■□□ 2.27
LINC00664-201ENST00000596203 CCDC180Q9P1Z9 1646 aa25.61■■□□□ 1.69
LINC00664-201ENST00000596203 ABCC9O60706 1549 aa24.58■■□□□ 1.52
LINC00664-201ENST00000596203 ZCCHC6Q5VYS8 1495 aaKnown RBP24.46■■□□□ 1.51
LINC00664-201ENST00000596203 DCAF8L2P0C7V8 631 aa24.35■■□□□ 1.49
LINC00664-201ENST00000596203 DCAF1Q9Y4B6 1507 aa24.11■■□□□ 1.45
LINC00664-201ENST00000596203 MYO15BQ96JP2 1530 aa23.95■■□□□ 1.42
LINC00664-201ENST00000596203 NACADO15069 1562 aa23.94■■□□□ 1.42
LINC00664-201ENST00000596203 RB1CC1Q8TDY2 1594 aa23.84■■□□□ 1.41
LINC00664-201ENST00000596203 SHROOM4Q9ULL8 1493 aa23.68■■□□□ 1.38
LINC00664-201ENST00000596203 SCRIBQ14160 1630 aa23.56■■□□□ 1.36
LINC00664-201ENST00000596203 UNC13AQ9UPW8 1703 aa23.31■■□□□ 1.32
LINC00664-201ENST00000596203 PABPN1Q86U42 306 aaKnown RBP eCLIP23.13■■□□□ 1.29
LINC00664-201ENST00000596203 BICRAQ9NZM4 1560 aa23.08■■□□□ 1.29
LINC00664-201ENST00000596203 CECR2Q9BXF3 1484 aa22.73■■□□□ 1.23
LINC00664-201ENST00000596203 SUPT5HO00267 1087 aaKnown RBP22.62■■□□□ 1.21
LINC00664-201ENST00000596203 BAZ1AQ9NRL2 1556 aaPredicted RBP22.58■■□□□ 1.21
LINC00664-201ENST00000596203 MROH2BQ7Z745 1585 aa22.56■■□□□ 1.2
LINC00664-201ENST00000596203 RSF1Q96T23 1441 aaPredicted RBP22.53■■□□□ 1.2
LINC00664-201ENST00000596203 SMARCA4P51532 1647 aa22.52■■□□□ 1.2
LINC00664-201ENST00000596203 EIF4G1Q04637 1599 aaKnown RBP22.44■■□□□ 1.18
LINC00664-201ENST00000596203 WIZO95785 1651 aa22.36■■□□□ 1.17
LINC00664-201ENST00000596203 ATAD2BQ9ULI0 1458 aa22.24■■□□□ 1.15
LINC00664-201ENST00000596203 SMARCA2P51531 1590 aa22.23■■□□□ 1.15
LINC00664-201ENST00000596203 PEG3Q9GZU2 1588 aa22.23■■□□□ 1.15
LINC00664-201ENST00000596203 CC2D2AQ9P2K1 1620 aa22.21■■□□□ 1.15
LINC00664-201ENST00000596203 BAZ1BQ9UIG0 1483 aaKnown RBP22.13■■□□□ 1.13
LINC00664-201ENST00000596203 TOP2AP11388 1531 aaKnown RBP22.12■■□□□ 1.13
LINC00664-201ENST00000596203 NCAPD3P42695 1498 aa22.09■■□□□ 1.13
LINC00664-201ENST00000596203 HMGXB3Q12766 1538 aa22.03■■□□□ 1.12
LINC00664-201ENST00000596203 DNAJC5BQ9UF47 199 aa21.95■■□□□ 1.1
LINC00664-201ENST00000596203 CCDC88BA6NC98 1476 aa21.9■■□□□ 1.1
LINC00664-201ENST00000596203 CADPSQ9ULU8 1353 aa21.53■■□□□ 1.04
LINC00664-201ENST00000596203 CFTRP13569 1480 aa21.51■■□□□ 1.03
LINC00664-201ENST00000596203 NESP48681 1621 aa21.46■■□□□ 1.03
LINC00664-201ENST00000596203 CHIC1Q5VXU3 224 aa21.43■■□□□ 1.02
LINC00664-201ENST00000596203 LAMC3Q9Y6N6 1575 aa21.4■■□□□ 1.02
LINC00664-201ENST00000596203 PRDM2Q13029 1718 aa21.38■■□□□ 1.01
LINC00664-201ENST00000596203 ABCC8Q09428 1581 aa21.34■■□□□ 1.01
LINC00664-201ENST00000596203 FANCD2Q9BXW9 1451 aa21.3■■□□□ 1
LINC00664-201ENST00000596203 PDS5BQ9NTI5 1447 aa21.28■■□□□ 1
LINC00664-201ENST00000596203 TRIM41Q8WV44 630 aa21.28■■□□□ 1
LINC00664-201ENST00000596203 WRNQ14191 1432 aaPredicted RBP eCLIP21.24■□□□□ 0.99
LINC00664-201ENST00000596203 CEP164Q9UPV0 1460 aa21.21■□□□□ 0.99
LINC00664-201ENST00000596203 KIF21AQ7Z4S6 1674 aa21.19■□□□□ 0.98
LINC00664-201ENST00000596203 SYNJ1O43426 1573 aa21.15■□□□□ 0.98
LINC00664-201ENST00000596203 ERCC6Q03468 1493 aa21.14■□□□□ 0.97
LINC00664-201ENST00000596203 CUX1P39880 1505 aa21.12■□□□□ 0.97
LINC00664-201ENST00000596203 TOP2BQ02880 1626 aa21.09■□□□□ 0.97
LINC00664-201ENST00000596203 BIVM-ERCC5R4GMW8 1640 aa21.06■□□□□ 0.96
LINC00664-201ENST00000596203 DNMBPQ6XZF7 1577 aa21.04■□□□□ 0.96
LINC00664-201ENST00000596203 URB2Q14146 1524 aaKnown RBP21.04■□□□□ 0.96
LINC00664-201ENST00000596203 TOPBP1Q92547 1522 aa21.02■□□□□ 0.96
LINC00664-201ENST00000596203 MRC2Q9UBG0 1479 aa21.02■□□□□ 0.96
LINC00664-201ENST00000596203 FGD5Q6ZNL6 1462 aa20.95■□□□□ 0.94
LINC00664-201ENST00000596203 FAM9AQ8IZU1 332 aaPredicted RBP20.92■□□□□ 0.94
LINC00664-201ENST00000596203 THOC2Q8NI27 1593 aaKnown RBP20.91■□□□□ 0.94
LINC00664-201ENST00000596203 WDR62O43379 1518 aa20.89■□□□□ 0.94
LINC00664-201ENST00000596203 POLA1P09884 1462 aaPredicted RBP20.89■□□□□ 0.94
LINC00664-201ENST00000596203 SOGA1O94964 1423 aa20.87■□□□□ 0.93
LINC00664-201ENST00000596203 RAD54L2Q9Y4B4 1467 aa20.84■□□□□ 0.93
LINC00664-201ENST00000596203 RUSC2Q8N2Y8 1516 aa20.81■□□□□ 0.92
LINC00664-201ENST00000596203 CUX2O14529 1486 aa20.77■□□□□ 0.92
LINC00664-201ENST00000596203 EEA1Q15075 1411 aa20.75■□□□□ 0.91
LINC00664-201ENST00000596203 KIF27Q86VH2 1401 aa20.74■□□□□ 0.91
LINC00664-201ENST00000596203 ABCA10Q8WWZ4 1543 aa20.74■□□□□ 0.91
LINC00664-201ENST00000596203 TARBP1Q13395 1621 aaKnown RBP20.71■□□□□ 0.91
LINC00664-201ENST00000596203 IFT140Q96RY7 1462 aa20.71■□□□□ 0.91
LINC00664-201ENST00000596203 CSRNP3Q8WYN3 585 aa20.7■□□□□ 0.9
LINC00664-201ENST00000596203 WDR97A6NE52 1622 aa20.68■□□□□ 0.9
LINC00664-201ENST00000596203 TDRD9Q8NDG6 1382 aaKnown RBP20.68■□□□□ 0.9
LINC00664-201ENST00000596203 EHMT2Q96KQ7 1210 aa20.67■□□□□ 0.9
LINC00664-201ENST00000596203 LOC105371045A0A1W2PR82 267 aa20.63■□□□□ 0.89
LINC00664-201ENST00000596203 ZNF608Q9ULD9 1512 aaPredicted RBP20.61■□□□□ 0.89
LINC00664-201ENST00000596203 AQRO60306 1485 aaKnown RBP eCLIP20.6■□□□□ 0.89
LINC00664-201ENST00000596203 GAPVD1Q14C86 1478 aa20.6■□□□□ 0.89
LINC00664-201ENST00000596203 ABCA5Q8WWZ7 1642 aa20.59■□□□□ 0.89
LINC00664-201ENST00000596203 IGF1RP08069 1367 aa20.58■□□□□ 0.88
LINC00664-201ENST00000596203 EIF4G3O43432 1585 aaKnown RBP20.52■□□□□ 0.88
LINC00664-201ENST00000596203 PBRM1Q86U86 1689 aa20.5■□□□□ 0.87
LINC00664-201ENST00000596203 ERICH3Q5RHP9 1530 aa20.49■□□□□ 0.87
LINC00664-201ENST00000596203 GRIN2BQ13224 1484 aa20.49■□□□□ 0.87
LINC00664-201ENST00000596203 CARMIL1Q5VZK9 1371 aa20.49■□□□□ 0.87
LINC00664-201ENST00000596203 KIF21BO75037 1637 aa20.48■□□□□ 0.87
LINC00664-201ENST00000596203 PRXQ9BXM0 1461 aa20.48■□□□□ 0.87
LINC00664-201ENST00000596203 GOLGA3Q08378 1498 aa20.46■□□□□ 0.87
LINC00664-201ENST00000596203 RAPGEF2Q9Y4G8 1499 aa20.46■□□□□ 0.87
LINC00664-201ENST00000596203 UBTFP17480 764 aaKnown RBP20.45■□□□□ 0.86
LINC00664-201ENST00000596203 CUL7Q14999 1698 aa20.45■□□□□ 0.86
LINC00664-201ENST00000596203 SNAPC4Q5SXM2 1469 aa20.4■□□□□ 0.86
LINC00664-201ENST00000596203 FHAD1B1AJZ9 1412 aa20.37■□□□□ 0.85
LINC00664-201ENST00000596203 ADAMTS12P58397 1594 aa20.36■□□□□ 0.85
LINC00664-201ENST00000596203 MAGI1Q96QZ7 1491 aaPredicted RBP20.34■□□□□ 0.85
LINC00664-201ENST00000596203 TNIKQ9UKE5 1360 aa20.33■□□□□ 0.84
LINC00664-201ENST00000596203 FBLN2P98095 1184 aa20.31■□□□□ 0.84
LINC00664-201ENST00000596203 CHMP7Q8WUX9 453 aaPredicted RBP20.3■□□□□ 0.84
LINC00664-201ENST00000596203 SYNJ2O15056 1496 aa20.27■□□□□ 0.84
LINC00664-201ENST00000596203 RANGAP1P46060 587 aaPredicted RBP20.26■□□□□ 0.83
LINC00664-201ENST00000596203 GRIN2AQ12879 1464 aa20.23■□□□□ 0.83
LINC00664-201ENST00000596203 CEP162Q5TB80 1403 aa20.21■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms