RNA–Protein interactions for RNA: ENST00000595476.1

SAMD4B-203, Transcript of sterile alpha motif domain containing 4B, humanhuman

TSL 3

Gene SAMD4B, Length 710 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMD4B-203ENST00000595476 NISCHQ9Y2I1 1504 aa40.81■■■■■ 4.12
SAMD4B-203ENST00000595476 CCDC180Q9P1Z9 1646 aa36.18■■■■□ 3.38
SAMD4B-203ENST00000595476 ABCC9O60706 1549 aa35.19■■■■□ 3.22
SAMD4B-203ENST00000595476 ZCCHC6Q5VYS8 1495 aaKnown RBP34.01■■■■□ 3.04
SAMD4B-203ENST00000595476 DCAF8L2P0C7V8 631 aa33.99■■■■□ 3.03
SAMD4B-203ENST00000595476 NACADO15069 1562 aa33.97■■■■□ 3.03
SAMD4B-203ENST00000595476 RB1CC1Q8TDY2 1594 aa33.94■■■■□ 3.02
SAMD4B-203ENST00000595476 MYO15BQ96JP2 1530 aa33.84■■■■□ 3.01
SAMD4B-203ENST00000595476 DCAF1Q9Y4B6 1507 aa33.78■■■■□ 3
SAMD4B-203ENST00000595476 UNC13AQ9UPW8 1703 aa33.22■■■□□ 2.91
SAMD4B-203ENST00000595476 SCRIBQ14160 1630 aa33■■■□□ 2.87
SAMD4B-203ENST00000595476 BICRAQ9NZM4 1560 aa32.95■■■□□ 2.86
SAMD4B-203ENST00000595476 PABPN1Q86U42 306 aaKnown RBP eCLIP32.93■■■□□ 2.86
SAMD4B-203ENST00000595476 SHROOM4Q9ULL8 1493 aa32.57■■■□□ 2.8
SAMD4B-203ENST00000595476 DNAJC5BQ9UF47 199 aa32.17■■■□□ 2.74
SAMD4B-203ENST00000595476 EIF4G1Q04637 1599 aaKnown RBP32.03■■■□□ 2.72
SAMD4B-203ENST00000595476 CC2D2AQ9P2K1 1620 aa31.86■■■□□ 2.69
SAMD4B-203ENST00000595476 CECR2Q9BXF3 1484 aa31.78■■■□□ 2.68
SAMD4B-203ENST00000595476 SMARCA4P51532 1647 aa31.6■■■□□ 2.65
SAMD4B-203ENST00000595476 BAZ1AQ9NRL2 1556 aaPredicted RBP31.6■■■□□ 2.65
SAMD4B-203ENST00000595476 MROH2BQ7Z745 1585 aa31.46■■■□□ 2.63
SAMD4B-203ENST00000595476 ATAD2BQ9ULI0 1458 aa31.4■■■□□ 2.62
SAMD4B-203ENST00000595476 NCAPD3P42695 1498 aa31.35■■■□□ 2.61
SAMD4B-203ENST00000595476 SMARCA2P51531 1590 aa31.34■■■□□ 2.61
SAMD4B-203ENST00000595476 PEG3Q9GZU2 1588 aa31.31■■■□□ 2.6
SAMD4B-203ENST00000595476 HMGXB3Q12766 1538 aa31.19■■■□□ 2.58
SAMD4B-203ENST00000595476 RSF1Q96T23 1441 aaPredicted RBP31.16■■■□□ 2.58
SAMD4B-203ENST00000595476 WIZO95785 1651 aa31.13■■■□□ 2.57
SAMD4B-203ENST00000595476 BAZ1BQ9UIG0 1483 aaKnown RBP31.12■■■□□ 2.57
SAMD4B-203ENST00000595476 TOP2AP11388 1531 aaKnown RBP30.78■■■□□ 2.52
SAMD4B-203ENST00000595476 NESP48681 1621 aa30.53■■■□□ 2.48
SAMD4B-203ENST00000595476 SUPT5HO00267 1087 aaKnown RBP30.51■■■□□ 2.47
SAMD4B-203ENST00000595476 LAMC3Q9Y6N6 1575 aa30.48■■■□□ 2.47
SAMD4B-203ENST00000595476 CCDC88BA6NC98 1476 aa30.45■■■□□ 2.47
SAMD4B-203ENST00000595476 CADPSQ9ULU8 1353 aa30.44■■■□□ 2.46
SAMD4B-203ENST00000595476 CFTRP13569 1480 aa30.31■■■□□ 2.44
SAMD4B-203ENST00000595476 ERCC6Q03468 1493 aa30.29■■■□□ 2.44
SAMD4B-203ENST00000595476 PDS5BQ9NTI5 1447 aa30.25■■■□□ 2.43
SAMD4B-203ENST00000595476 KIF21AQ7Z4S6 1674 aa30.18■■■□□ 2.42
SAMD4B-203ENST00000595476 PRDM2Q13029 1718 aa30.1■■■□□ 2.41
SAMD4B-203ENST00000595476 FANCD2Q9BXW9 1451 aa30.07■■■□□ 2.4
SAMD4B-203ENST00000595476 THOC2Q8NI27 1593 aaKnown RBP30.02■■■□□ 2.4
SAMD4B-203ENST00000595476 CEP164Q9UPV0 1460 aa30■■■□□ 2.39
SAMD4B-203ENST00000595476 MRC2Q9UBG0 1479 aa29.93■■■□□ 2.38
SAMD4B-203ENST00000595476 CUX2O14529 1486 aa29.91■■■□□ 2.38
SAMD4B-203ENST00000595476 WDR62O43379 1518 aa29.83■■■□□ 2.37
SAMD4B-203ENST00000595476 URB2Q14146 1524 aaKnown RBP29.78■■■□□ 2.36
SAMD4B-203ENST00000595476 ABCC8Q09428 1581 aa29.64■■■□□ 2.33
SAMD4B-203ENST00000595476 TOPBP1Q92547 1522 aa29.63■■■□□ 2.33
SAMD4B-203ENST00000595476 DNMBPQ6XZF7 1577 aa29.61■■■□□ 2.33
SAMD4B-203ENST00000595476 CUX1P39880 1505 aa29.49■■■□□ 2.31
SAMD4B-203ENST00000595476 POLA1P09884 1462 aaPredicted RBP29.39■■■□□ 2.3
SAMD4B-203ENST00000595476 IFT140Q96RY7 1462 aa29.38■■■□□ 2.29
SAMD4B-203ENST00000595476 WRNQ14191 1432 aaPredicted RBP eCLIP29.36■■■□□ 2.29
SAMD4B-203ENST00000595476 FGD5Q6ZNL6 1462 aa29.35■■■□□ 2.29
SAMD4B-203ENST00000595476 TARBP1Q13395 1621 aaKnown RBP29.31■■■□□ 2.28
SAMD4B-203ENST00000595476 TOP2BQ02880 1626 aa29.29■■■□□ 2.28
SAMD4B-203ENST00000595476 BIVM-ERCC5R4GMW8 1640 aa29.29■■■□□ 2.28
SAMD4B-203ENST00000595476 SYNJ1O43426 1573 aa29.29■■■□□ 2.28
SAMD4B-203ENST00000595476 SOGA1O94964 1423 aa29.28■■■□□ 2.28
SAMD4B-203ENST00000595476 RAD54L2Q9Y4B4 1467 aa29.27■■■□□ 2.28
SAMD4B-203ENST00000595476 ZNF608Q9ULD9 1512 aaPredicted RBP29.25■■■□□ 2.27
SAMD4B-203ENST00000595476 EIF4G3O43432 1585 aaKnown RBP29.13■■■□□ 2.25
SAMD4B-203ENST00000595476 WDR97A6NE52 1622 aa29.11■■■□□ 2.25
SAMD4B-203ENST00000595476 AQRO60306 1485 aaKnown RBP eCLIP29.1■■■□□ 2.258e-7■■■□□ 16.8
SAMD4B-203ENST00000595476 TDRD9Q8NDG6 1382 aaKnown RBP29.1■■■□□ 2.25
SAMD4B-203ENST00000595476 ABCA10Q8WWZ4 1543 aa29.08■■■□□ 2.25
SAMD4B-203ENST00000595476 ABCA5Q8WWZ7 1642 aa28.94■■■□□ 2.22
SAMD4B-203ENST00000595476 GAPVD1Q14C86 1478 aa28.93■■■□□ 2.22
SAMD4B-203ENST00000595476 GRIN2BQ13224 1484 aa28.9■■■□□ 2.22
SAMD4B-203ENST00000595476 PBRM1Q86U86 1689 aa28.86■■■□□ 2.21
SAMD4B-203ENST00000595476 TRIM41Q8WV44 630 aa28.82■■■□□ 2.2
SAMD4B-203ENST00000595476 SNAPC4Q5SXM2 1469 aa28.82■■■□□ 2.2
SAMD4B-203ENST00000595476 DNAJC5Q9H3Z4 198 aa28.8■■■□□ 2.2
SAMD4B-203ENST00000595476 MAGI1Q96QZ7 1491 aaPredicted RBP28.79■■■□□ 2.2
SAMD4B-203ENST00000595476 OSCARQ8IYS5 282 aa28.74■■■□□ 2.19
SAMD4B-203ENST00000595476 CHD1O14646 1710 aa28.74■■■□□ 2.19
SAMD4B-203ENST00000595476 ERICH3Q5RHP9 1530 aa28.74■■■□□ 2.19
SAMD4B-203ENST00000595476 KIF27Q86VH2 1401 aa28.72■■■□□ 2.19
SAMD4B-203ENST00000595476 FBLN2P98095 1184 aa28.7■■■□□ 2.18
SAMD4B-203ENST00000595476 SYNJ2O15056 1496 aa28.69■■■□□ 2.18
SAMD4B-203ENST00000595476 CHMP7Q8WUX9 453 aaPredicted RBP28.66■■■□□ 2.18
SAMD4B-203ENST00000595476 ADAMTS12P58397 1594 aa28.63■■■□□ 2.17
SAMD4B-203ENST00000595476 CHIC1Q5VXU3 224 aa28.63■■■□□ 2.17
SAMD4B-203ENST00000595476 IGF1RP08069 1367 aa28.62■■■□□ 2.17
SAMD4B-203ENST00000595476 FHAD1B1AJZ9 1412 aa28.6■■■□□ 2.17
SAMD4B-203ENST00000595476 RUSC2Q8N2Y8 1516 aa28.57■■■□□ 2.16
SAMD4B-203ENST00000595476 GRIN2AQ12879 1464 aa28.53■■■□□ 2.16
SAMD4B-203ENST00000595476 CUL7Q14999 1698 aa28.5■■■□□ 2.15
SAMD4B-203ENST00000595476 CARMIL1Q5VZK9 1371 aa28.44■■■□□ 2.14
SAMD4B-203ENST00000595476 CLASP1Q7Z460 1538 aa28.43■■■□□ 2.14
SAMD4B-203ENST00000595476 NUP160Q12769 1436 aa28.4■■■□□ 2.14
SAMD4B-203ENST00000595476 CEP170Q5SW79 1584 aa28.38■■■□□ 2.13
SAMD4B-203ENST00000595476 EEA1Q15075 1411 aa28.31■■■□□ 2.12
SAMD4B-203ENST00000595476 RAPGEF2Q9Y4G8 1499 aa28.28■■■□□ 2.12
SAMD4B-203ENST00000595476 CSRNP3Q8WYN3 585 aa28.28■■■□□ 2.12
SAMD4B-203ENST00000595476 ARHGEF11O15085 1522 aa28.26■■■□□ 2.11
SAMD4B-203ENST00000595476 PRXQ9BXM0 1461 aa28.25■■■□□ 2.11
SAMD4B-203ENST00000595476 RIMBP3CA6NJZ7 1639 aa28.25■■■□□ 2.11
SAMD4B-203ENST00000595476 RIMBP3BA6NNM3 1639 aa28.25■■■□□ 2.11
Retrieved 100 of 20,778 RNA–protein pairs in 119.7 ms