RNA–Protein interactions for RNA: ENST00000595455.1

LIN37-209, Transcript of lin-37 DREAM MuvB core complex component, humanhuman

TSL 5

Gene LIN37, Length 1,635 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN37-209ENST00000595455 NISCHQ9Y2I1 1504 aa39.14■■■■□ 3.86
LIN37-209ENST00000595455 CCDC180Q9P1Z9 1646 aa34.44■■■■□ 3.1
LIN37-209ENST00000595455 ABCC9O60706 1549 aa33.4■■■□□ 2.94
LIN37-209ENST00000595455 DCAF8L2P0C7V8 631 aa32.74■■■□□ 2.83
LIN37-209ENST00000595455 ZCCHC6Q5VYS8 1495 aaKnown RBP32.7■■■□□ 2.82
LIN37-209ENST00000595455 DCAF1Q9Y4B6 1507 aa32.26■■■□□ 2.75
LIN37-209ENST00000595455 NACADO15069 1562 aa32.25■■■□□ 2.75
LIN37-209ENST00000595455 RB1CC1Q8TDY2 1594 aa32.19■■■□□ 2.74
LIN37-209ENST00000595455 MYO15BQ96JP2 1530 aa32.13■■■□□ 2.73
LIN37-209ENST00000595455 SCRIBQ14160 1630 aa31.69■■■□□ 2.66
LIN37-209ENST00000595455 UNC13AQ9UPW8 1703 aa31.64■■■□□ 2.66
LIN37-209ENST00000595455 SHROOM4Q9ULL8 1493 aa31.55■■■□□ 2.64
LIN37-209ENST00000595455 PABPN1Q86U42 306 aaKnown RBP eCLIP31.39■■■□□ 2.62
LIN37-209ENST00000595455 BICRAQ9NZM4 1560 aa31.31■■■□□ 2.6
LIN37-209ENST00000595455 CECR2Q9BXF3 1484 aa30.57■■■□□ 2.49
LIN37-209ENST00000595455 EIF4G1Q04637 1599 aaKnown RBP30.39■■■□□ 2.46
LIN37-209ENST00000595455 MROH2BQ7Z745 1585 aa30.28■■■□□ 2.44
LIN37-209ENST00000595455 SMARCA4P51532 1647 aa30.26■■■□□ 2.44
LIN37-209ENST00000595455 DNAJC5BQ9UF47 199 aa30.25■■■□□ 2.43
LIN37-209ENST00000595455 BAZ1AQ9NRL2 1556 aaPredicted RBP30.25■■■□□ 2.43
LIN37-209ENST00000595455 CC2D2AQ9P2K1 1620 aa30.18■■■□□ 2.42
LIN37-209ENST00000595455 RSF1Q96T23 1441 aaPredicted RBP30.09■■■□□ 2.41
LIN37-209ENST00000595455 WIZO95785 1651 aa30.02■■■□□ 2.4
LIN37-209ENST00000595455 SUPT5HO00267 1087 aaKnown RBP29.96■■■□□ 2.39
LIN37-209ENST00000595455 ATAD2BQ9ULI0 1458 aa29.95■■■□□ 2.39
LIN37-209ENST00000595455 SMARCA2P51531 1590 aa29.87■■■□□ 2.37
LIN37-209ENST00000595455 PEG3Q9GZU2 1588 aa29.85■■■□□ 2.37
LIN37-209ENST00000595455 NCAPD3P42695 1498 aa29.79■■■□□ 2.36
LIN37-209ENST00000595455 BAZ1BQ9UIG0 1483 aaKnown RBP29.73■■■□□ 2.35
LIN37-209ENST00000595455 HMGXB3Q12766 1538 aa29.66■■■□□ 2.34
LIN37-209ENST00000595455 TOP2AP11388 1531 aaKnown RBP29.59■■■□□ 2.33
LIN37-209ENST00000595455 CCDC88BA6NC98 1476 aa29.32■■■□□ 2.28
LIN37-209ENST00000595455 NESP48681 1621 aa29.11■■■□□ 2.25
LIN37-209ENST00000595455 CADPSQ9ULU8 1353 aa28.99■■■□□ 2.23
LIN37-209ENST00000595455 CFTRP13569 1480 aa28.93■■■□□ 2.22
LIN37-209ENST00000595455 LAMC3Q9Y6N6 1575 aa28.9■■■□□ 2.22
LIN37-209ENST00000595455 PRDM2Q13029 1718 aa28.75■■■□□ 2.19
LIN37-209ENST00000595455 KIF21AQ7Z4S6 1674 aa28.73■■■□□ 2.19
LIN37-209ENST00000595455 FANCD2Q9BXW9 1451 aa28.7■■■□□ 2.18
LIN37-209ENST00000595455 PDS5BQ9NTI5 1447 aa28.69■■■□□ 2.18
LIN37-209ENST00000595455 ERCC6Q03468 1493 aa28.66■■■□□ 2.18
LIN37-209ENST00000595455 CEP164Q9UPV0 1460 aa28.57■■■□□ 2.16
LIN37-209ENST00000595455 ABCC8Q09428 1581 aa28.51■■■□□ 2.15
LIN37-209ENST00000595455 URB2Q14146 1524 aaKnown RBP28.42■■■□□ 2.14
LIN37-209ENST00000595455 THOC2Q8NI27 1593 aaKnown RBP28.4■■■□□ 2.14
LIN37-209ENST00000595455 MRC2Q9UBG0 1479 aa28.4■■■□□ 2.14
LIN37-209ENST00000595455 CUX1P39880 1505 aa28.34■■■□□ 2.13
LIN37-209ENST00000595455 WRNQ14191 1432 aaPredicted RBP eCLIP28.32■■■□□ 2.12
LIN37-209ENST00000595455 TOPBP1Q92547 1522 aa28.31■■■□□ 2.12
LIN37-209ENST00000595455 SYNJ1O43426 1573 aa28.3■■■□□ 2.12
LIN37-209ENST00000595455 DNMBPQ6XZF7 1577 aa28.27■■■□□ 2.12
LIN37-209ENST00000595455 WDR62O43379 1518 aa28.27■■■□□ 2.12
LIN37-209ENST00000595455 CHIC1Q5VXU3 224 aa28.21■■■□□ 2.11
LIN37-209ENST00000595455 TOP2BQ02880 1626 aa28.18■■■□□ 2.1
LIN37-209ENST00000595455 BIVM-ERCC5R4GMW8 1640 aa28.17■■■□□ 2.1
LIN37-209ENST00000595455 FGD5Q6ZNL6 1462 aa28.14■■■□□ 2.1
LIN37-209ENST00000595455 TRIM41Q8WV44 630 aa28.14■■■□□ 2.09
LIN37-209ENST00000595455 POLA1P09884 1462 aaPredicted RBP28.11■■■□□ 2.09
LIN37-209ENST00000595455 CUX2O14529 1486 aa28.08■■■□□ 2.09
LIN37-209ENST00000595455 RAD54L2Q9Y4B4 1467 aa28.08■■■□□ 2.09
LIN37-209ENST00000595455 SOGA1O94964 1423 aa28.01■■■□□ 2.07
LIN37-209ENST00000595455 TARBP1Q13395 1621 aaKnown RBP27.96■■■□□ 2.07
LIN37-209ENST00000595455 IFT140Q96RY7 1462 aa27.91■■■□□ 2.06
LIN37-209ENST00000595455 ZNF608Q9ULD9 1512 aaPredicted RBP27.9■■■□□ 2.06
LIN37-209ENST00000595455 TDRD9Q8NDG6 1382 aaKnown RBP27.87■■■□□ 2.05
LIN37-209ENST00000595455 WDR97A6NE52 1622 aa27.84■■■□□ 2.05
LIN37-209ENST00000595455 AQRO60306 1485 aaKnown RBP eCLIP27.82■■■□□ 2.043e-6■■□□□ 13.8
LIN37-209ENST00000595455 ABCA10Q8WWZ4 1543 aa27.82■■■□□ 2.04
LIN37-209ENST00000595455 RUSC2Q8N2Y8 1516 aa27.79■■■□□ 2.04
LIN37-209ENST00000595455 EIF4G3O43432 1585 aaKnown RBP27.73■■■□□ 2.03
LIN37-209ENST00000595455 FAM9AQ8IZU1 332 aaPredicted RBP27.73■■■□□ 2.03
LIN37-209ENST00000595455 ABCA5Q8WWZ7 1642 aa27.68■■■□□ 2.02
LIN37-209ENST00000595455 GAPVD1Q14C86 1478 aa27.68■■■□□ 2.02
LIN37-209ENST00000595455 KIF27Q86VH2 1401 aa27.65■■■□□ 2.02
LIN37-209ENST00000595455 PBRM1Q86U86 1689 aa27.61■■■□□ 2.01
LIN37-209ENST00000595455 GRIN2BQ13224 1484 aa27.56■■■□□ 2
LIN37-209ENST00000595455 IGF1RP08069 1367 aa27.54■■■□□ 2
LIN37-209ENST00000595455 SNAPC4Q5SXM2 1469 aa27.51■■□□□ 1.99
LIN37-209ENST00000595455 CSRNP3Q8WYN3 585 aa27.47■■□□□ 1.99
LIN37-209ENST00000595455 ERICH3Q5RHP9 1530 aa27.47■■□□□ 1.99
LIN37-209ENST00000595455 EHMT2Q96KQ7 1210 aa27.45■■□□□ 1.99
LIN37-209ENST00000595455 FBLN2P98095 1184 aa27.43■■□□□ 1.98
LIN37-209ENST00000595455 EEA1Q15075 1411 aa27.41■■□□□ 1.98
LIN37-209ENST00000595455 CARMIL1Q5VZK9 1371 aa27.38■■□□□ 1.97
LIN37-209ENST00000595455 ADAMTS12P58397 1594 aa27.38■■□□□ 1.97
LIN37-209ENST00000595455 MAGI1Q96QZ7 1491 aaPredicted RBP27.37■■□□□ 1.97
LIN37-209ENST00000595455 CHMP7Q8WUX9 453 aaPredicted RBP27.34■■□□□ 1.97
LIN37-209ENST00000595455 CHD1O14646 1710 aa27.34■■□□□ 1.97
LIN37-209ENST00000595455 CUL7Q14999 1698 aa27.33■■□□□ 1.97
LIN37-209ENST00000595455 FHAD1B1AJZ9 1412 aa27.33■■□□□ 1.97
LIN37-209ENST00000595455 SYNJ2O15056 1496 aa27.3■■□□□ 1.96
LIN37-209ENST00000595455 PRXQ9BXM0 1461 aa27.28■■□□□ 1.96
LIN37-209ENST00000595455 RAPGEF2Q9Y4G8 1499 aa27.24■■□□□ 1.95
LIN37-209ENST00000595455 GRIN2AQ12879 1464 aa27.22■■□□□ 1.95
LIN37-209ENST00000595455 LOC105371045A0A1W2PR82 267 aa27.2■■□□□ 1.95
LIN37-209ENST00000595455 KIF21BO75037 1637 aa27.17■■□□□ 1.94
LIN37-209ENST00000595455 CEP170Q5SW79 1584 aa27.13■■□□□ 1.93
LIN37-209ENST00000595455 OSCARQ8IYS5 282 aa27.09■■□□□ 1.93
LIN37-209ENST00000595455 UBTFP17480 764 aaKnown RBP27.08■■□□□ 1.93
LIN37-209ENST00000595455 GOLGA3Q08378 1498 aa27.07■■□□□ 1.92
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms