RNA–Protein interactions for RNA: ENST00000595384.1

SIPA1L3-204, Transcript of signal induced proliferation associated 1 like 3, humanhuman

TSL 5

Gene SIPA1L3, Length 785 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIPA1L3-204ENST00000595384 NISCHQ9Y2I1 1504 aa27.81■■■□□ 2.04
SIPA1L3-204ENST00000595384 ABCC9O60706 1549 aa26.56■■□□□ 1.84
SIPA1L3-204ENST00000595384 DNAJC5BQ9UF47 199 aa25.9■■□□□ 1.74
SIPA1L3-204ENST00000595384 CCDC180Q9P1Z9 1646 aa25.45■■□□□ 1.66
SIPA1L3-204ENST00000595384 RB1CC1Q8TDY2 1594 aa24.74■■□□□ 1.55
SIPA1L3-204ENST00000595384 PABPN1Q86U42 306 aaKnown RBP eCLIP24.55■■□□□ 1.52
SIPA1L3-204ENST00000595384 DNAJC5Q9H3Z4 198 aa24.53■■□□□ 1.52
SIPA1L3-204ENST00000595384 UNC13AQ9UPW8 1703 aa24.3■■□□□ 1.48
SIPA1L3-204ENST00000595384 NACADO15069 1562 aa24.29■■□□□ 1.48
SIPA1L3-204ENST00000595384 BICRAQ9NZM4 1560 aa24.12■■□□□ 1.45
SIPA1L3-204ENST00000595384 CECR2Q9BXF3 1484 aa24.01■■□□□ 1.43
SIPA1L3-204ENST00000595384 DCAF8L2P0C7V8 631 aa23.98■■□□□ 1.43
SIPA1L3-204ENST00000595384 CC2D2AQ9P2K1 1620 aa23.94■■□□□ 1.42
SIPA1L3-204ENST00000595384 EIF4G1Q04637 1599 aaKnown RBP23.59■■□□□ 1.37
SIPA1L3-204ENST00000595384 SHROOM4Q9ULL8 1493 aa23.55■■□□□ 1.36
SIPA1L3-204ENST00000595384 MYO15BQ96JP2 1530 aa23.53■■□□□ 1.36
SIPA1L3-204ENST00000595384 CUX2O14529 1486 aa23.27■■□□□ 1.32
SIPA1L3-204ENST00000595384 SCRIBQ14160 1630 aa23.18■■□□□ 1.3
SIPA1L3-204ENST00000595384 TRIM41Q8WV44 630 aa23.06■■□□□ 1.28
SIPA1L3-204ENST00000595384 ERCC6Q03468 1493 aa22.98■■□□□ 1.27
SIPA1L3-204ENST00000595384 DCAF1Q9Y4B6 1507 aa22.84■■□□□ 1.25
SIPA1L3-204ENST00000595384 ZCCHC6Q5VYS8 1495 aaKnown RBP22.81■■□□□ 1.24
SIPA1L3-204ENST00000595384 NESP48681 1621 aa22.52■■□□□ 1.2
SIPA1L3-204ENST00000595384 THOC2Q8NI27 1593 aaKnown RBP22.5■■□□□ 1.19
SIPA1L3-204ENST00000595384 NCAPD3P42695 1498 aa22.42■■□□□ 1.18
SIPA1L3-204ENST00000595384 SMARCA2P51531 1590 aa22.29■■□□□ 1.16
SIPA1L3-204ENST00000595384 ATAD2BQ9ULI0 1458 aa22.23■■□□□ 1.15
SIPA1L3-204ENST00000595384 KIF21AQ7Z4S6 1674 aa22.22■■□□□ 1.15
SIPA1L3-204ENST00000595384 HMGXB3Q12766 1538 aa22.17■■□□□ 1.14
SIPA1L3-204ENST00000595384 BAZ1AQ9NRL2 1556 aaPredicted RBP22.13■■□□□ 1.13
SIPA1L3-204ENST00000595384 LAMC3Q9Y6N6 1575 aa22.11■■□□□ 1.13
SIPA1L3-204ENST00000595384 OSCARQ8IYS5 282 aa22.01■■□□□ 1.11
SIPA1L3-204ENST00000595384 PDS5BQ9NTI5 1447 aa21.99■■□□□ 1.11
SIPA1L3-204ENST00000595384 SMARCA4P51532 1647 aa21.96■■□□□ 1.11
SIPA1L3-204ENST00000595384 BAZ1BQ9UIG0 1483 aaKnown RBP21.96■■□□□ 1.11
SIPA1L3-204ENST00000595384 RIMBP3CA6NJZ7 1639 aa21.95■■□□□ 1.1
SIPA1L3-204ENST00000595384 RIMBP3BA6NNM3 1639 aa21.95■■□□□ 1.1
SIPA1L3-204ENST00000595384 RIMBP3Q9UFD9 1639 aa21.95■■□□□ 1.1
SIPA1L3-204ENST00000595384 MRC2Q9UBG0 1479 aa21.91■■□□□ 1.1
SIPA1L3-204ENST00000595384 AEBP2Q6ZN18 517 aaPredicted RBP21.91■■□□□ 1.1
SIPA1L3-204ENST00000595384 WDR62O43379 1518 aa21.9■■□□□ 1.1
SIPA1L3-204ENST00000595384 TRHP20396 242 aaPredicted RBP21.74■■□□□ 1.07
SIPA1L3-204ENST00000595384 ARHGEF11O15085 1522 aa21.73■■□□□ 1.07
SIPA1L3-204ENST00000595384 PEG3Q9GZU2 1588 aa21.7■■□□□ 1.06
SIPA1L3-204ENST00000595384 CADPSQ9ULU8 1353 aa21.69■■□□□ 1.06
SIPA1L3-204ENST00000595384 CYB5RLQ6IPT4 315 aa21.63■■□□□ 1.05
SIPA1L3-204ENST00000595384 CEP164Q9UPV0 1460 aa21.6■■□□□ 1.05
SIPA1L3-204ENST00000595384 FANCD2Q9BXW9 1451 aa21.48■■□□□ 1.03
SIPA1L3-204ENST00000595384 MROH2BQ7Z745 1585 aa21.45■■□□□ 1.02
SIPA1L3-204ENST00000595384 ARAP1Q96P48 1450 aa21.45■■□□□ 1.02
SIPA1L3-204ENST00000595384 URB2Q14146 1524 aaKnown RBP21.4■■□□□ 1.02
SIPA1L3-204ENST00000595384 ZNF608Q9ULD9 1512 aaPredicted RBP21.34■■□□□ 1.01
SIPA1L3-204ENST00000595384 CHD1O14646 1710 aa21.26■□□□□ 0.99
SIPA1L3-204ENST00000595384 CFTRP13569 1480 aa21.22■□□□□ 0.99
SIPA1L3-204ENST00000595384 ILDR1Q86SU0 546 aaPredicted RBP21.2■□□□□ 0.98
SIPA1L3-204ENST00000595384 IFT140Q96RY7 1462 aa21.19■□□□□ 0.98
SIPA1L3-204ENST00000595384 RSF1Q96T23 1441 aaPredicted RBP21.18■□□□□ 0.98
SIPA1L3-204ENST00000595384 WIZO95785 1651 aa21.18■□□□□ 0.98
SIPA1L3-204ENST00000595384 EIF4G3O43432 1585 aaKnown RBP21.16■□□□□ 0.98
SIPA1L3-204ENST00000595384 FBLN2P98095 1184 aa21.06■□□□□ 0.96
SIPA1L3-204ENST00000595384 PRDM2Q13029 1718 aa21.01■□□□□ 0.95
SIPA1L3-204ENST00000595384 AQRO60306 1485 aaKnown RBP eCLIP20.98■□□□□ 0.95
SIPA1L3-204ENST00000595384 TOPBP1Q92547 1522 aa20.97■□□□□ 0.95
SIPA1L3-204ENST00000595384 CLASP1Q7Z460 1538 aa20.92■□□□□ 0.94
SIPA1L3-204ENST00000595384 TARBP1Q13395 1621 aaKnown RBP20.88■□□□□ 0.93
SIPA1L3-204ENST00000595384 SYNJ1O43426 1573 aa20.79■□□□□ 0.92
SIPA1L3-204ENST00000595384 DNMBPQ6XZF7 1577 aa20.78■□□□□ 0.92
SIPA1L3-204ENST00000595384 GAPVD1Q14C86 1478 aa20.77■□□□□ 0.92
SIPA1L3-204ENST00000595384 TOP2AP11388 1531 aaKnown RBP20.77■□□□□ 0.92
SIPA1L3-204ENST00000595384 ABCC8Q09428 1581 aa20.76■□□□□ 0.91
SIPA1L3-204ENST00000595384 SNAPC4Q5SXM2 1469 aa20.74■□□□□ 0.91
SIPA1L3-204ENST00000595384 KIF13AQ9H1H9 1805 aa20.69■□□□□ 0.9
SIPA1L3-204ENST00000595384 KDM4FA0A1W2PPD8 638 aa20.68■□□□□ 0.9
SIPA1L3-204ENST00000595384 CHMP7Q8WUX9 453 aaPredicted RBP20.68■□□□□ 0.9
SIPA1L3-204ENST00000595384 POLA1P09884 1462 aaPredicted RBP20.68■□□□□ 0.9
SIPA1L3-204ENST00000595384 TDRD9Q8NDG6 1382 aaKnown RBP20.67■□□□□ 0.9
SIPA1L3-204ENST00000595384 RAD54L2Q9Y4B4 1467 aa20.65■□□□□ 0.9
SIPA1L3-204ENST00000595384 MAGI1Q96QZ7 1491 aaPredicted RBP20.58■□□□□ 0.89
SIPA1L3-204ENST00000595384 ERCC6L2Q5T890 1561 aa20.57■□□□□ 0.88
SIPA1L3-204ENST00000595384 CCDC88BA6NC98 1476 aa20.56■□□□□ 0.88
SIPA1L3-204ENST00000595384 SYNJ2O15056 1496 aa20.55■□□□□ 0.88
SIPA1L3-204ENST00000595384 SOGA1O94964 1423 aa20.54■□□□□ 0.88
SIPA1L3-204ENST00000595384 WDR97A6NE52 1622 aa20.51■□□□□ 0.87
SIPA1L3-204ENST00000595384 GRIN2BQ13224 1484 aa20.48■□□□□ 0.87
SIPA1L3-204ENST00000595384 KDM6BO15054 1643 aa20.41■□□□□ 0.86
SIPA1L3-204ENST00000595384 PBRM1Q86U86 1689 aa20.41■□□□□ 0.86
SIPA1L3-204ENST00000595384 FGD5Q6ZNL6 1462 aa20.4■□□□□ 0.86
SIPA1L3-204ENST00000595384 CEP170Q5SW79 1584 aa20.38■□□□□ 0.85
SIPA1L3-204ENST00000595384 FAM69CQ0P6D2 419 aa20.37■□□□□ 0.85
SIPA1L3-204ENST00000595384 HECW2Q9P2P5 1572 aa20.37■□□□□ 0.85
SIPA1L3-204ENST00000595384 ABCC10Q5T3U5 1492 aa20.33■□□□□ 0.85
SIPA1L3-204ENST00000595384 TSPOAP1O95153 1857 aa20.29■□□□□ 0.84
SIPA1L3-204ENST00000595384 DIP2BQ9P265 1576 aa20.29■□□□□ 0.84
SIPA1L3-204ENST00000595384 SHROOM2Q13796 1616 aa20.27■□□□□ 0.83
SIPA1L3-204ENST00000595384 ADGRL1O94910 1474 aa20.26■□□□□ 0.83
SIPA1L3-204ENST00000595384 FBXO41Q8TF61 875 aa20.25■□□□□ 0.83
SIPA1L3-204ENST00000595384 GRIN2AQ12879 1464 aa20.24■□□□□ 0.83
SIPA1L3-204ENST00000595384 CUX1P39880 1505 aa20.22■□□□□ 0.83
SIPA1L3-204ENST00000595384 NUP160Q12769 1436 aa20.19■□□□□ 0.82
SIPA1L3-204ENST00000595384 MAPKBP1O60336 1514 aa20.19■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms