RNA–Protein interactions for RNA: ENST00000595380.5

FARP1-213, Transcript of FERM, ARH/RhoGEF and pleckstrin domain protein 1, humanhuman

TSL 5

Gene FARP1, Length 616 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FARP1-213ENST00000595380 NISCHQ9Y2I1 1504 aa25.74■■□□□ 1.71
FARP1-213ENST00000595380 CCDC180Q9P1Z9 1646 aa22.71■■□□□ 1.23
FARP1-213ENST00000595380 ABCC9O60706 1549 aa22.49■■□□□ 1.19
FARP1-213ENST00000595380 DCAF8L2P0C7V8 631 aa21.81■■□□□ 1.08
FARP1-213ENST00000595380 RB1CC1Q8TDY2 1594 aa21.48■■□□□ 1.03
FARP1-213ENST00000595380 ZCCHC6Q5VYS8 1495 aaKnown RBP21.44■■□□□ 1.02
FARP1-213ENST00000595380 NACADO15069 1562 aa21.44■■□□□ 1.02
FARP1-213ENST00000595380 MYO15BQ96JP2 1530 aa21.24■□□□□ 0.99
FARP1-213ENST00000595380 DCAF1Q9Y4B6 1507 aa21.18■□□□□ 0.98
FARP1-213ENST00000595380 PABPN1Q86U42 306 aaKnown RBP eCLIP21.12■□□□□ 0.97
FARP1-213ENST00000595380 SCRIBQ14160 1630 aa20.96■□□□□ 0.95
FARP1-213ENST00000595380 UNC13AQ9UPW8 1703 aa20.86■□□□□ 0.93
FARP1-213ENST00000595380 BICRAQ9NZM4 1560 aa20.82■□□□□ 0.92
FARP1-213ENST00000595380 SHROOM4Q9ULL8 1493 aa20.63■□□□□ 0.89
FARP1-213ENST00000595380 DNAJC5BQ9UF47 199 aa20.63■□□□□ 0.89
FARP1-213ENST00000595380 EIF4G1Q04637 1599 aaKnown RBP20.31■□□□□ 0.84
FARP1-213ENST00000595380 CC2D2AQ9P2K1 1620 aa20.22■□□□□ 0.83
FARP1-213ENST00000595380 CECR2Q9BXF3 1484 aa20.16■□□□□ 0.82
FARP1-213ENST00000595380 SMARCA4P51532 1647 aa19.94■□□□□ 0.78
FARP1-213ENST00000595380 BAZ1AQ9NRL2 1556 aaPredicted RBP19.93■□□□□ 0.78
FARP1-213ENST00000595380 MROH2BQ7Z745 1585 aa19.89■□□□□ 0.77
FARP1-213ENST00000595380 ATAD2BQ9ULI0 1458 aa19.88■□□□□ 0.77
FARP1-213ENST00000595380 NCAPD3P42695 1498 aa19.82■□□□□ 0.76
FARP1-213ENST00000595380 SMARCA2P51531 1590 aa19.8■□□□□ 0.76
FARP1-213ENST00000595380 BAZ1BQ9UIG0 1483 aaKnown RBP19.75■□□□□ 0.75
FARP1-213ENST00000595380 RSF1Q96T23 1441 aaPredicted RBP19.69■□□□□ 0.74
FARP1-213ENST00000595380 HMGXB3Q12766 1538 aa19.68■□□□□ 0.74
FARP1-213ENST00000595380 PEG3Q9GZU2 1588 aa19.67■□□□□ 0.74
FARP1-213ENST00000595380 WIZO95785 1651 aa19.65■□□□□ 0.74
FARP1-213ENST00000595380 NESP48681 1621 aa19.45■□□□□ 0.7
FARP1-213ENST00000595380 SUPT5HO00267 1087 aaKnown RBP19.43■□□□□ 0.7
FARP1-213ENST00000595380 TOP2AP11388 1531 aaKnown RBP19.42■□□□□ 0.7
FARP1-213ENST00000595380 ERCC6Q03468 1493 aa19.39■□□□□ 0.69
FARP1-213ENST00000595380 CADPSQ9ULU8 1353 aa19.31■□□□□ 0.68
FARP1-213ENST00000595380 CCDC88BA6NC98 1476 aa19.26■□□□□ 0.67
FARP1-213ENST00000595380 LAMC3Q9Y6N6 1575 aa19.25■□□□□ 0.67
FARP1-213ENST00000595380 PDS5BQ9NTI5 1447 aa19.21■□□□□ 0.67
FARP1-213ENST00000595380 CFTRP13569 1480 aa19.16■□□□□ 0.66
FARP1-213ENST00000595380 FANCD2Q9BXW9 1451 aa19.1■□□□□ 0.65
FARP1-213ENST00000595380 KIF21AQ7Z4S6 1674 aa19.08■□□□□ 0.64
FARP1-213ENST00000595380 CEP164Q9UPV0 1460 aa19.06■□□□□ 0.64
FARP1-213ENST00000595380 CUX2O14529 1486 aa19.03■□□□□ 0.64
FARP1-213ENST00000595380 MRC2Q9UBG0 1479 aa19.02■□□□□ 0.63
FARP1-213ENST00000595380 THOC2Q8NI27 1593 aaKnown RBP19.01■□□□□ 0.63
FARP1-213ENST00000595380 WDR62O43379 1518 aa18.9■□□□□ 0.62
FARP1-213ENST00000595380 URB2Q14146 1524 aaKnown RBP18.9■□□□□ 0.62
FARP1-213ENST00000595380 PRDM2Q13029 1718 aa18.8■□□□□ 0.6
FARP1-213ENST00000595380 TOPBP1Q92547 1522 aa18.77■□□□□ 0.6
FARP1-213ENST00000595380 DNMBPQ6XZF7 1577 aa18.71■□□□□ 0.59
FARP1-213ENST00000595380 ABCC8Q09428 1581 aa18.69■□□□□ 0.58
FARP1-213ENST00000595380 CUX1P39880 1505 aa18.65■□□□□ 0.58
FARP1-213ENST00000595380 IFT140Q96RY7 1462 aa18.64■□□□□ 0.57
FARP1-213ENST00000595380 POLA1P09884 1462 aaPredicted RBP18.63■□□□□ 0.57
FARP1-213ENST00000595380 RAD54L2Q9Y4B4 1467 aa18.62■□□□□ 0.57
FARP1-213ENST00000595380 ZNF608Q9ULD9 1512 aaPredicted RBP18.62■□□□□ 0.57
FARP1-213ENST00000595380 FGD5Q6ZNL6 1462 aa18.61■□□□□ 0.57
FARP1-213ENST00000595380 SOGA1O94964 1423 aa18.59■□□□□ 0.57
FARP1-213ENST00000595380 WRNQ14191 1432 aaPredicted RBP eCLIP18.58■□□□□ 0.57
FARP1-213ENST00000595380 TDRD9Q8NDG6 1382 aaKnown RBP18.55■□□□□ 0.56
FARP1-213ENST00000595380 AQRO60306 1485 aaKnown RBP eCLIP18.54■□□□□ 0.561e-8■■□□□ 12.2
FARP1-213ENST00000595380 SYNJ1O43426 1573 aa18.5■□□□□ 0.55
FARP1-213ENST00000595380 TARBP1Q13395 1621 aaKnown RBP18.49■□□□□ 0.55
FARP1-213ENST00000595380 DNAJC5Q9H3Z4 198 aa18.49■□□□□ 0.55
FARP1-213ENST00000595380 EIF4G3O43432 1585 aaKnown RBP18.46■□□□□ 0.55
FARP1-213ENST00000595380 FBLN2P98095 1184 aa18.44■□□□□ 0.54
FARP1-213ENST00000595380 TOP2BQ02880 1626 aa18.43■□□□□ 0.54
FARP1-213ENST00000595380 BIVM-ERCC5R4GMW8 1640 aa18.38■□□□□ 0.53
FARP1-213ENST00000595380 OSCARQ8IYS5 282 aa18.36■□□□□ 0.53
FARP1-213ENST00000595380 ABCA10Q8WWZ4 1543 aa18.36■□□□□ 0.53
FARP1-213ENST00000595380 GAPVD1Q14C86 1478 aa18.35■□□□□ 0.53
FARP1-213ENST00000595380 SNAPC4Q5SXM2 1469 aa18.34■□□□□ 0.53
FARP1-213ENST00000595380 GRIN2BQ13224 1484 aa18.33■□□□□ 0.52
FARP1-213ENST00000595380 CHMP7Q8WUX9 453 aaPredicted RBP18.3■□□□□ 0.52
FARP1-213ENST00000595380 WDR97A6NE52 1622 aa18.29■□□□□ 0.52
FARP1-213ENST00000595380 TRIM41Q8WV44 630 aa18.28■□□□□ 0.52
FARP1-213ENST00000595380 ABCA5Q8WWZ7 1642 aa18.24■□□□□ 0.51
FARP1-213ENST00000595380 MAGI1Q96QZ7 1491 aaPredicted RBP18.23■□□□□ 0.51
FARP1-213ENST00000595380 SYNJ2O15056 1496 aa18.2■□□□□ 0.5
FARP1-213ENST00000595380 PBRM1Q86U86 1689 aa18.18■□□□□ 0.5
FARP1-213ENST00000595380 KIF27Q86VH2 1401 aa18.18■□□□□ 0.5
FARP1-213ENST00000595380 CHD1O14646 1710 aa18.16■□□□□ 0.5
FARP1-213ENST00000595380 FHAD1B1AJZ9 1412 aa18.13■□□□□ 0.49
FARP1-213ENST00000595380 ERICH3Q5RHP9 1530 aa18.12■□□□□ 0.49
FARP1-213ENST00000595380 IGF1RP08069 1367 aa18.11■□□□□ 0.49
FARP1-213ENST00000595380 ADAMTS12P58397 1594 aa18.11■□□□□ 0.49
FARP1-213ENST00000595380 GRIN2AQ12879 1464 aa18.09■□□□□ 0.49
FARP1-213ENST00000595380 RUSC2Q8N2Y8 1516 aa18.08■□□□□ 0.48
FARP1-213ENST00000595380 CHIC1Q5VXU3 224 aa18.04■□□□□ 0.48
FARP1-213ENST00000595380 CARMIL1Q5VZK9 1371 aa18.02■□□□□ 0.47
FARP1-213ENST00000595380 FAM9AQ8IZU1 332 aaPredicted RBP18.01■□□□□ 0.47
FARP1-213ENST00000595380 ARHGEF11O15085 1522 aa18.01■□□□□ 0.47
FARP1-213ENST00000595380 CLASP1Q7Z460 1538 aa18■□□□□ 0.47
FARP1-213ENST00000595380 CEP170Q5SW79 1584 aa17.99■□□□□ 0.47
FARP1-213ENST00000595380 CYB5RLQ6IPT4 315 aa17.98■□□□□ 0.47
FARP1-213ENST00000595380 NUP160Q12769 1436 aa17.98■□□□□ 0.47
FARP1-213ENST00000595380 RIMBP3CA6NJZ7 1639 aa17.96■□□□□ 0.47
FARP1-213ENST00000595380 RIMBP3BA6NNM3 1639 aa17.96■□□□□ 0.47
FARP1-213ENST00000595380 RIMBP3Q9UFD9 1639 aa17.96■□□□□ 0.47
FARP1-213ENST00000595380 CUL7Q14999 1698 aa17.93■□□□□ 0.46
FARP1-213ENST00000595380 EHMT2Q96KQ7 1210 aa17.89■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 7.1 ms