RNA–Protein interactions for RNA: ENST00000595035.5

SNAPC2-203, Transcript of small nuclear RNA activating complex polypeptide 2, humanhuman

TSL 3

Gene SNAPC2, Length 576 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC2-203ENST00000595035 NISCHQ9Y2I1 1504 aa22.99■■□□□ 1.27
SNAPC2-203ENST00000595035 ABCC9O60706 1549 aa21.43■■□□□ 1.02
SNAPC2-203ENST00000595035 CCDC180Q9P1Z9 1646 aa20.86■□□□□ 0.93
SNAPC2-203ENST00000595035 DNAJC5BQ9UF47 199 aa20.73■□□□□ 0.91
SNAPC2-203ENST00000595035 RB1CC1Q8TDY2 1594 aa20.17■□□□□ 0.82
SNAPC2-203ENST00000595035 NACADO15069 1562 aa19.92■□□□□ 0.78
SNAPC2-203ENST00000595035 PABPN1Q86U42 306 aaKnown RBP eCLIP19.85■□□□□ 0.77
SNAPC2-203ENST00000595035 BICRAQ9NZM4 1560 aa19.63■□□□□ 0.73
SNAPC2-203ENST00000595035 UNC13AQ9UPW8 1703 aa19.59■□□□□ 0.73
SNAPC2-203ENST00000595035 DNAJC5Q9H3Z4 198 aa19.54■□□□□ 0.72
SNAPC2-203ENST00000595035 MYO15BQ96JP2 1530 aa19.54■□□□□ 0.72
SNAPC2-203ENST00000595035 DCAF8L2P0C7V8 631 aa19.5■□□□□ 0.71
SNAPC2-203ENST00000595035 CECR2Q9BXF3 1484 aa19.42■□□□□ 0.7
SNAPC2-203ENST00000595035 SHROOM4Q9ULL8 1493 aa19.41■□□□□ 0.7
SNAPC2-203ENST00000595035 CC2D2AQ9P2K1 1620 aa19.33■□□□□ 0.69
SNAPC2-203ENST00000595035 EIF4G1Q04637 1599 aaKnown RBP19.18■□□□□ 0.66
SNAPC2-203ENST00000595035 DCAF1Q9Y4B6 1507 aa19.04■□□□□ 0.64
SNAPC2-203ENST00000595035 ZCCHC6Q5VYS8 1495 aaKnown RBP18.93■□□□□ 0.62
SNAPC2-203ENST00000595035 SCRIBQ14160 1630 aa18.89■□□□□ 0.62
SNAPC2-203ENST00000595035 CUX2O14529 1486 aa18.83■□□□□ 0.6
SNAPC2-203ENST00000595035 ERCC6Q03468 1493 aa18.54■□□□□ 0.56
SNAPC2-203ENST00000595035 NCAPD3P42695 1498 aa18.45■□□□□ 0.54
SNAPC2-203ENST00000595035 ATAD2BQ9ULI0 1458 aa18.26■□□□□ 0.51
SNAPC2-203ENST00000595035 TRIM41Q8WV44 630 aa18.25■□□□□ 0.51
SNAPC2-203ENST00000595035 NESP48681 1621 aa18.24■□□□□ 0.51
SNAPC2-203ENST00000595035 HMGXB3Q12766 1538 aa18.22■□□□□ 0.51
SNAPC2-203ENST00000595035 THOC2Q8NI27 1593 aaKnown RBP18.2■□□□□ 0.5
SNAPC2-203ENST00000595035 SMARCA2P51531 1590 aa18.15■□□□□ 0.5
SNAPC2-203ENST00000595035 LAMC3Q9Y6N6 1575 aa18.05■□□□□ 0.48
SNAPC2-203ENST00000595035 SMARCA4P51532 1647 aa18.02■□□□□ 0.48
SNAPC2-203ENST00000595035 PDS5BQ9NTI5 1447 aa18■□□□□ 0.47
SNAPC2-203ENST00000595035 BAZ1BQ9UIG0 1483 aaKnown RBP18■□□□□ 0.47
SNAPC2-203ENST00000595035 PEG3Q9GZU2 1588 aa17.95■□□□□ 0.46
SNAPC2-203ENST00000595035 KIF21AQ7Z4S6 1674 aa17.91■□□□□ 0.46
SNAPC2-203ENST00000595035 BAZ1AQ9NRL2 1556 aaPredicted RBP17.87■□□□□ 0.45
SNAPC2-203ENST00000595035 MRC2Q9UBG0 1479 aa17.87■□□□□ 0.45
SNAPC2-203ENST00000595035 WDR62O43379 1518 aa17.86■□□□□ 0.45
SNAPC2-203ENST00000595035 OSCARQ8IYS5 282 aa17.83■□□□□ 0.44
SNAPC2-203ENST00000595035 CADPSQ9ULU8 1353 aa17.82■□□□□ 0.44
SNAPC2-203ENST00000595035 MROH2BQ7Z745 1585 aa17.67■□□□□ 0.42
SNAPC2-203ENST00000595035 CEP164Q9UPV0 1460 aa17.64■□□□□ 0.41
SNAPC2-203ENST00000595035 RIMBP3CA6NJZ7 1639 aa17.6■□□□□ 0.41
SNAPC2-203ENST00000595035 RIMBP3BA6NNM3 1639 aa17.6■□□□□ 0.41
SNAPC2-203ENST00000595035 RIMBP3Q9UFD9 1639 aa17.6■□□□□ 0.41
SNAPC2-203ENST00000595035 FANCD2Q9BXW9 1451 aa17.57■□□□□ 0.4
SNAPC2-203ENST00000595035 ARHGEF11O15085 1522 aa17.52■□□□□ 0.4
SNAPC2-203ENST00000595035 CFTRP13569 1480 aa17.5■□□□□ 0.39
SNAPC2-203ENST00000595035 URB2Q14146 1524 aaKnown RBP17.48■□□□□ 0.39
SNAPC2-203ENST00000595035 CYB5RLQ6IPT4 315 aa17.39■□□□□ 0.37
SNAPC2-203ENST00000595035 IFT140Q96RY7 1462 aa17.36■□□□□ 0.37
SNAPC2-203ENST00000595035 WIZO95785 1651 aa17.36■□□□□ 0.37
SNAPC2-203ENST00000595035 TRHP20396 242 aaPredicted RBP17.35■□□□□ 0.37
SNAPC2-203ENST00000595035 ZNF608Q9ULD9 1512 aaPredicted RBP17.35■□□□□ 0.37
SNAPC2-203ENST00000595035 ARAP1Q96P48 1450 aa17.32■□□□□ 0.36
SNAPC2-203ENST00000595035 AEBP2Q6ZN18 517 aaPredicted RBP17.3■□□□□ 0.36
SNAPC2-203ENST00000595035 RSF1Q96T23 1441 aaPredicted RBP17.28■□□□□ 0.36
SNAPC2-203ENST00000595035 EIF4G3O43432 1585 aaKnown RBP17.19■□□□□ 0.34
SNAPC2-203ENST00000595035 TOP2AP11388 1531 aaKnown RBP17.18■□□□□ 0.34
SNAPC2-203ENST00000595035 TOPBP1Q92547 1522 aa17.17■□□□□ 0.34
SNAPC2-203ENST00000595035 ABCC8Q09428 1581 aa17.13■□□□□ 0.33
SNAPC2-203ENST00000595035 AQRO60306 1485 aaKnown RBP eCLIP17.11■□□□□ 0.331e-8■■■■□ 21.1
SNAPC2-203ENST00000595035 CHD1O14646 1710 aa17.1■□□□□ 0.33
SNAPC2-203ENST00000595035 PRDM2Q13029 1718 aa17.1■□□□□ 0.33
SNAPC2-203ENST00000595035 TARBP1Q13395 1621 aaKnown RBP17.07■□□□□ 0.32
SNAPC2-203ENST00000595035 DNMBPQ6XZF7 1577 aa17.05■□□□□ 0.32
SNAPC2-203ENST00000595035 CLASP1Q7Z460 1538 aa17.03■□□□□ 0.32
SNAPC2-203ENST00000595035 FBLN2P98095 1184 aa17.03■□□□□ 0.32
SNAPC2-203ENST00000595035 CCDC88BA6NC98 1476 aa16.99■□□□□ 0.31
SNAPC2-203ENST00000595035 POLA1P09884 1462 aaPredicted RBP16.97■□□□□ 0.31
SNAPC2-203ENST00000595035 SYNJ1O43426 1573 aa16.92■□□□□ 0.3
SNAPC2-203ENST00000595035 SNAPC4Q5SXM2 1469 aa16.91■□□□□ 0.3
SNAPC2-203ENST00000595035 TDRD9Q8NDG6 1382 aaKnown RBP16.9■□□□□ 0.3
SNAPC2-203ENST00000595035 WDR97A6NE52 1622 aa16.9■□□□□ 0.3
SNAPC2-203ENST00000595035 MAGI1Q96QZ7 1491 aaPredicted RBP16.89■□□□□ 0.29
SNAPC2-203ENST00000595035 RAD54L2Q9Y4B4 1467 aa16.88■□□□□ 0.29
SNAPC2-203ENST00000595035 CHMP7Q8WUX9 453 aaPredicted RBP16.88■□□□□ 0.29
SNAPC2-203ENST00000595035 GAPVD1Q14C86 1478 aa16.87■□□□□ 0.29
SNAPC2-203ENST00000595035 SOGA1O94964 1423 aa16.87■□□□□ 0.29
SNAPC2-203ENST00000595035 SYNJ2O15056 1496 aa16.84■□□□□ 0.29
SNAPC2-203ENST00000595035 GRIN2BQ13224 1484 aa16.81■□□□□ 0.28
SNAPC2-203ENST00000595035 FGD5Q6ZNL6 1462 aa16.74■□□□□ 0.27
SNAPC2-203ENST00000595035 ILDR1Q86SU0 546 aaPredicted RBP16.7■□□□□ 0.26
SNAPC2-203ENST00000595035 ERCC6L2Q5T890 1561 aa16.66■□□□□ 0.26
SNAPC2-203ENST00000595035 CUX1P39880 1505 aa16.65■□□□□ 0.26
SNAPC2-203ENST00000595035 NUP160Q12769 1436 aa16.61■□□□□ 0.25
SNAPC2-203ENST00000595035 KDM4FA0A1W2PPD8 638 aa16.6■□□□□ 0.25
SNAPC2-203ENST00000595035 CEP170Q5SW79 1584 aa16.6■□□□□ 0.25
SNAPC2-203ENST00000595035 GRIN2AQ12879 1464 aa16.59■□□□□ 0.25
SNAPC2-203ENST00000595035 KIF13AQ9H1H9 1805 aa16.59■□□□□ 0.25
SNAPC2-203ENST00000595035 PBRM1Q86U86 1689 aa16.57■□□□□ 0.24
SNAPC2-203ENST00000595035 ABCA10Q8WWZ4 1543 aa16.57■□□□□ 0.24
SNAPC2-203ENST00000595035 ABCA5Q8WWZ7 1642 aa16.56■□□□□ 0.24
SNAPC2-203ENST00000595035 SHROOM2Q13796 1616 aa16.56■□□□□ 0.24
SNAPC2-203ENST00000595035 ABCC10Q5T3U5 1492 aa16.54■□□□□ 0.24
SNAPC2-203ENST00000595035 FAM69CQ0P6D2 419 aa16.49■□□□□ 0.23
SNAPC2-203ENST00000595035 ADAMTS12P58397 1594 aa16.47■□□□□ 0.23
SNAPC2-203ENST00000595035 MAPKBP1O60336 1514 aa16.47■□□□□ 0.23
SNAPC2-203ENST00000595035 FHAD1B1AJZ9 1412 aa16.45■□□□□ 0.22
SNAPC2-203ENST00000595035 PRG4Q92954 1404 aaPredicted RBP16.44■□□□□ 0.22
SNAPC2-203ENST00000595035 DIP2BQ9P265 1576 aa16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms